data_6GJU
#
_model_server_result.job_id            ur0KLpFI1XXAthRsSij-rw 
_model_server_result.datetime_utc      '2024-11-24 18:04:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6gju 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":701}' 
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_entry.id    6GJU 
#
_exptl.entry_id    6GJU 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6GJU 
_cell.length_a            38.68 
_cell.length_b            135.78 
_cell.length_c            190.65 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 6GJU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
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_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
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_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
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_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 B SG CYS 22 B CYS 22 1_555 B SG CYS 94 B CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? 
disulf ? disulf2 C SG CYS 22 C CYS 22 1_555 C SG CYS 95 C CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     6GJU 
_atom_sites.fract_transf_matrix[1][1]    0.025853 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007365 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005245 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 GOL A 1 701 1 GOL GOL . 
E 5 PEG A 1 702 1 PEG PEG . 
F 6 HOH A 1 801 15 HOH HOH . 
F 6 HOH A 2 802 45 HOH HOH . 
F 6 HOH A 3 803 60 HOH HOH . 
F 6 HOH A 4 804 68 HOH HOH . 
F 6 HOH A 5 805 71 HOH HOH . 
F 6 HOH A 6 806 6 HOH HOH . 
F 6 HOH A 7 807 63 HOH HOH . 
F 6 HOH A 8 808 5 HOH HOH . 
F 6 HOH A 9 809 3 HOH HOH . 
F 6 HOH A 10 810 76 HOH HOH . 
F 6 HOH A 11 811 22 HOH HOH . 
F 6 HOH A 12 812 23 HOH HOH . 
F 6 HOH A 13 813 24 HOH HOH . 
F 6 HOH A 14 814 59 HOH HOH . 
F 6 HOH A 15 815 53 HOH HOH . 
F 6 HOH A 16 816 37 HOH HOH . 
F 6 HOH A 17 817 36 HOH HOH . 
F 6 HOH A 18 818 27 HOH HOH . 
F 6 HOH A 19 819 10 HOH HOH . 
F 6 HOH A 20 820 7 HOH HOH . 
F 6 HOH A 21 821 17 HOH HOH . 
F 6 HOH A 22 822 48 HOH HOH . 
F 6 HOH A 23 823 31 HOH HOH . 
F 6 HOH A 24 824 8 HOH HOH . 
F 6 HOH A 25 825 29 HOH HOH . 
F 6 HOH A 26 826 20 HOH HOH . 
F 6 HOH A 27 827 33 HOH HOH . 
F 6 HOH A 28 828 73 HOH HOH . 
F 6 HOH A 29 829 74 HOH HOH . 
F 6 HOH A 30 830 67 HOH HOH . 
F 6 HOH A 31 831 79 HOH HOH . 
F 6 HOH A 32 832 30 HOH HOH . 
F 6 HOH A 33 833 80 HOH HOH . 
F 6 HOH A 34 834 28 HOH HOH . 
F 6 HOH A 35 835 42 HOH HOH . 
F 6 HOH A 36 836 82 HOH HOH . 
F 6 HOH A 37 837 57 HOH HOH . 
G 6 HOH B 1 201 86 HOH HOH . 
G 6 HOH B 2 202 2 HOH HOH . 
G 6 HOH B 3 203 75 HOH HOH . 
G 6 HOH B 4 204 35 HOH HOH . 
G 6 HOH B 5 205 54 HOH HOH . 
G 6 HOH B 6 206 43 HOH HOH . 
G 6 HOH B 7 207 14 HOH HOH . 
G 6 HOH B 8 208 62 HOH HOH . 
G 6 HOH B 9 209 52 HOH HOH . 
G 6 HOH B 10 210 81 HOH HOH . 
G 6 HOH B 11 211 41 HOH HOH . 
G 6 HOH B 12 212 1 HOH HOH . 
G 6 HOH B 13 213 21 HOH HOH . 
G 6 HOH B 14 214 44 HOH HOH . 
G 6 HOH B 15 215 11 HOH HOH . 
G 6 HOH B 16 216 19 HOH HOH . 
G 6 HOH B 17 217 13 HOH HOH . 
G 6 HOH B 18 218 12 HOH HOH . 
G 6 HOH B 19 219 9 HOH HOH . 
G 6 HOH B 20 220 4 HOH HOH . 
G 6 HOH B 21 221 16 HOH HOH . 
G 6 HOH B 22 222 46 HOH HOH . 
G 6 HOH B 23 223 32 HOH HOH . 
G 6 HOH B 24 224 58 HOH HOH . 
G 6 HOH B 25 225 26 HOH HOH . 
G 6 HOH B 26 226 70 HOH HOH . 
G 6 HOH B 27 227 39 HOH HOH . 
G 6 HOH B 28 228 34 HOH HOH . 
G 6 HOH B 29 229 49 HOH HOH . 
H 6 HOH C 1 201 84 HOH HOH . 
H 6 HOH C 2 202 83 HOH HOH . 
H 6 HOH C 3 203 85 HOH HOH . 
H 6 HOH C 4 204 56 HOH HOH . 
H 6 HOH C 5 205 69 HOH HOH . 
H 6 HOH C 6 206 51 HOH HOH . 
H 6 HOH C 7 207 55 HOH HOH . 
H 6 HOH C 8 208 38 HOH HOH . 
H 6 HOH C 9 209 72 HOH HOH . 
H 6 HOH C 10 210 64 HOH HOH . 
H 6 HOH C 11 211 40 HOH HOH . 
H 6 HOH C 12 212 18 HOH HOH . 
H 6 HOH C 13 213 88 HOH HOH . 
H 6 HOH C 14 214 77 HOH HOH . 
H 6 HOH C 15 215 78 HOH HOH . 
H 6 HOH C 16 216 61 HOH HOH . 
H 6 HOH C 17 217 47 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . D 4 2.602 -2.008 29.693 1 94.63 ? C1 GOL 701 A 1 
HETATM 2 O O1 GOL . . . D 4 1.585 -2.389 30.606 1 92.85 ? O1 GOL 701 A 1 
HETATM 3 C C2 GOL . . . D 4 3.309 -0.777 30.222 1 97.37 ? C2 GOL 701 A 1 
HETATM 4 O O2 GOL . . . D 4 4.71 -0.979 30.056 1 97.43 ? O2 GOL 701 A 1 
HETATM 5 C C3 GOL . . . D 4 2.848 0.456 29.449 1 99.03 ? C3 GOL 701 A 1 
HETATM 6 O O3 GOL . . . D 4 3.457 1.659 29.929 1 99.51 ? O3 GOL 701 A 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           285 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           6 
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