data_6GJU # _model_server_result.job_id 7m5VMWRVM41NxLdGPyqHWg _model_server_result.datetime_utc '2024-11-24 17:58:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6gju # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":702}' # _entry.id 6GJU # _exptl.entry_id 6GJU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6GJU _cell.length_a 38.68 _cell.length_b 135.78 _cell.length_c 190.65 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6GJU _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 22 B CYS 22 1_555 B SG CYS 94 B CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? disulf ? disulf2 C SG CYS 22 C CYS 22 1_555 C SG CYS 95 C CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 250 n n C1 C2 PEG sing 251 n n C1 H11 PEG sing 252 n n C1 H12 PEG sing 253 n n O1 HO1 PEG sing 254 n n C2 O2 PEG sing 255 n n C2 H21 PEG sing 256 n n C2 H22 PEG sing 257 n n O2 C3 PEG sing 258 n n C3 C4 PEG sing 259 n n C3 H31 PEG sing 260 n n C3 H32 PEG sing 261 n n C4 O4 PEG sing 262 n n C4 H41 PEG sing 263 n n C4 H42 PEG sing 264 n n O4 HO4 PEG sing 265 n n # _atom_sites.entry_id 6GJU _atom_sites.fract_transf_matrix[1][1] 0.025853 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007365 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005245 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 GOL A 1 701 1 GOL GOL . E 5 PEG A 1 702 1 PEG PEG . F 6 HOH A 1 801 15 HOH HOH . F 6 HOH A 2 802 45 HOH HOH . F 6 HOH A 3 803 60 HOH HOH . F 6 HOH A 4 804 68 HOH HOH . F 6 HOH A 5 805 71 HOH HOH . F 6 HOH A 6 806 6 HOH HOH . F 6 HOH A 7 807 63 HOH HOH . F 6 HOH A 8 808 5 HOH HOH . F 6 HOH A 9 809 3 HOH HOH . F 6 HOH A 10 810 76 HOH HOH . F 6 HOH A 11 811 22 HOH HOH . F 6 HOH A 12 812 23 HOH HOH . F 6 HOH A 13 813 24 HOH HOH . F 6 HOH A 14 814 59 HOH HOH . F 6 HOH A 15 815 53 HOH HOH . F 6 HOH A 16 816 37 HOH HOH . F 6 HOH A 17 817 36 HOH HOH . F 6 HOH A 18 818 27 HOH HOH . F 6 HOH A 19 819 10 HOH HOH . F 6 HOH A 20 820 7 HOH HOH . F 6 HOH A 21 821 17 HOH HOH . F 6 HOH A 22 822 48 HOH HOH . F 6 HOH A 23 823 31 HOH HOH . F 6 HOH A 24 824 8 HOH HOH . F 6 HOH A 25 825 29 HOH HOH . F 6 HOH A 26 826 20 HOH HOH . F 6 HOH A 27 827 33 HOH HOH . F 6 HOH A 28 828 73 HOH HOH . F 6 HOH A 29 829 74 HOH HOH . F 6 HOH A 30 830 67 HOH HOH . F 6 HOH A 31 831 79 HOH HOH . F 6 HOH A 32 832 30 HOH HOH . F 6 HOH A 33 833 80 HOH HOH . F 6 HOH A 34 834 28 HOH HOH . F 6 HOH A 35 835 42 HOH HOH . F 6 HOH A 36 836 82 HOH HOH . F 6 HOH A 37 837 57 HOH HOH . G 6 HOH B 1 201 86 HOH HOH . G 6 HOH B 2 202 2 HOH HOH . G 6 HOH B 3 203 75 HOH HOH . G 6 HOH B 4 204 35 HOH HOH . G 6 HOH B 5 205 54 HOH HOH . G 6 HOH B 6 206 43 HOH HOH . G 6 HOH B 7 207 14 HOH HOH . G 6 HOH B 8 208 62 HOH HOH . G 6 HOH B 9 209 52 HOH HOH . G 6 HOH B 10 210 81 HOH HOH . G 6 HOH B 11 211 41 HOH HOH . G 6 HOH B 12 212 1 HOH HOH . G 6 HOH B 13 213 21 HOH HOH . G 6 HOH B 14 214 44 HOH HOH . G 6 HOH B 15 215 11 HOH HOH . G 6 HOH B 16 216 19 HOH HOH . G 6 HOH B 17 217 13 HOH HOH . G 6 HOH B 18 218 12 HOH HOH . G 6 HOH B 19 219 9 HOH HOH . G 6 HOH B 20 220 4 HOH HOH . G 6 HOH B 21 221 16 HOH HOH . G 6 HOH B 22 222 46 HOH HOH . G 6 HOH B 23 223 32 HOH HOH . G 6 HOH B 24 224 58 HOH HOH . G 6 HOH B 25 225 26 HOH HOH . G 6 HOH B 26 226 70 HOH HOH . G 6 HOH B 27 227 39 HOH HOH . G 6 HOH B 28 228 34 HOH HOH . G 6 HOH B 29 229 49 HOH HOH . H 6 HOH C 1 201 84 HOH HOH . H 6 HOH C 2 202 83 HOH HOH . H 6 HOH C 3 203 85 HOH HOH . H 6 HOH C 4 204 56 HOH HOH . H 6 HOH C 5 205 69 HOH HOH . H 6 HOH C 6 206 51 HOH HOH . H 6 HOH C 7 207 55 HOH HOH . H 6 HOH C 8 208 38 HOH HOH . H 6 HOH C 9 209 72 HOH HOH . H 6 HOH C 10 210 64 HOH HOH . H 6 HOH C 11 211 40 HOH HOH . H 6 HOH C 12 212 18 HOH HOH . H 6 HOH C 13 213 88 HOH HOH . H 6 HOH C 14 214 77 HOH HOH . H 6 HOH C 15 215 78 HOH HOH . H 6 HOH C 16 216 61 HOH HOH . H 6 HOH C 17 217 47 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . E 5 -2.773 2.637 12.404 1 69.45 ? C1 PEG 702 A 1 HETATM 2 O O1 PEG . . . E 5 -3.15 2.603 11.034 1 69.96 ? O1 PEG 702 A 1 HETATM 3 C C2 PEG . . . E 5 -3.953 2.681 13.319 1 68.57 ? C2 PEG 702 A 1 HETATM 4 O O2 PEG . . . E 5 -3.569 3.086 14.625 1 67.03 ? O2 PEG 702 A 1 HETATM 5 C C3 PEG . . . E 5 -4.51 2.681 15.599 1 65.24 ? C3 PEG 702 A 1 HETATM 6 C C4 PEG . . . E 5 -4.055 3.082 16.953 1 64.36 ? C4 PEG 702 A 1 HETATM 7 O O4 PEG . . . E 5 -2.835 2.45 17.299 1 63.96 ? O4 PEG 702 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 215 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 7 #