data_6GKB # _model_server_result.job_id Vb9m9aOhwbz7qZ6WEBjc8w _model_server_result.datetime_utc '2024-11-18 23:30:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6gkb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 6GKB # _exptl.entry_id 6GKB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 55.845 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE (III) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6GKB _cell.length_a 176.679 _cell.length_b 176.679 _cell.length_c 176.679 _cell.Z_PDB 96 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6GKB _symmetry.cell_setting ? _symmetry.Int_Tables_number 209 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'F 4 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details 24-meric _pdbx_struct_assembly.oligomeric_count 24 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_675 -x+1,-y+2,z -1 0 0 0 -1 0 0 0 1 176.679 353.358 0 3 'crystal symmetry operation' 3_657 -x+1,y,-z+2 -1 0 0 0 1 0 0 0 -1 176.679 0 353.358 4 'crystal symmetry operation' 4_577 x,-y+2,-z+2 1 0 0 0 -1 0 0 0 -1 0 353.358 353.358 5 'crystal symmetry operation' 17_557 x,z,-y+2 1 0 0 0 0 1 0 -1 0 0 0 353.358 6 'crystal symmetry operation' 18_655 -x+1,z,y -1 0 0 0 0 1 0 1 0 176.679 0 0 7 'crystal symmetry operation' 19_677 -x+1,-z+2,-y+2 -1 0 0 0 0 -1 0 -1 0 176.679 353.358 353.358 8 'crystal symmetry operation' 20_575 x,-z+2,y 1 0 0 0 0 -1 0 1 0 0 353.358 0 9 'crystal symmetry operation' 57_455 y-1/2,z,x+1/2 0 1 0 0 0 1 1 0 0 -88.3395 0 88.3395 10 'crystal symmetry operation' 58_656 -y+3/2,z,-x+3/2 0 -1 0 0 0 1 -1 0 0 265.0185 0 265.0185 11 'crystal symmetry operation' 59_476 y-1/2,-z+2,-x+3/2 0 1 0 0 0 -1 -1 0 0 -88.3395 353.358 265.0185 12 'crystal symmetry operation' 60_675 -y+3/2,-z+2,x+1/2 0 -1 0 0 0 -1 1 0 0 265.0185 353.358 88.3395 13 'crystal symmetry operation' 69_456 z-1/2,y,-x+3/2 0 0 1 0 1 0 -1 0 0 -88.3395 0 265.0185 14 'crystal symmetry operation' 70_475 z-1/2,-y+2,x+1/2 0 0 1 0 -1 0 1 0 0 -88.3395 353.358 88.3395 15 'crystal symmetry operation' 71_655 -z+3/2,y,x+1/2 0 0 -1 0 1 0 1 0 0 265.0185 0 88.3395 16 'crystal symmetry operation' 72_676 -z+3/2,-y+2,-x+3/2 0 0 -1 0 -1 0 -1 0 0 265.0185 353.358 265.0185 17 'crystal symmetry operation' 77_455 z-1/2,x+1/2,y 0 0 1 1 0 0 0 1 0 -88.3395 88.3395 0 18 'crystal symmetry operation' 78_467 z-1/2,-x+3/2,-y+2 0 0 1 -1 0 0 0 -1 0 -88.3395 265.0185 353.358 19 'crystal symmetry operation' 79_665 -z+3/2,-x+3/2,y 0 0 -1 -1 0 0 0 1 0 265.0185 265.0185 0 20 'crystal symmetry operation' 80_657 -z+3/2,x+1/2,-y+2 0 0 -1 1 0 0 0 -1 0 265.0185 88.3395 353.358 21 'crystal symmetry operation' 85_457 y-1/2,x+1/2,-z+2 0 1 0 1 0 0 0 0 -1 -88.3395 88.3395 353.358 22 'crystal symmetry operation' 86_667 -y+3/2,-x+3/2,-z+2 0 -1 0 -1 0 0 0 0 -1 265.0185 265.0185 353.358 23 'crystal symmetry operation' 87_465 y-1/2,-x+3/2,z 0 1 0 -1 0 0 0 0 1 -88.3395 265.0185 0 24 'crystal symmetry operation' 88_655 -y+3/2,x+1/2,z 0 -1 0 1 0 0 0 0 1 265.0185 88.3395 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 29 A GLU 33 1_555 B FE FE . A FE 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? metalc ? metalc2 A OE1 GLU 62 A GLU 66 1_555 B FE FE . A FE 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? metalc ? metalc3 A ND1 HIS 65 A HIS 69 1_555 B FE FE . A FE 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? metalc ? metalc4 B FE FE . A FE 201 1_555 D O HOH . A HOH 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc5 B FE FE . A FE 201 1_555 D O HOH . A HOH 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? metalc ? metalc6 C FE FE . A FE 202 1_555 D O HOH . A HOH 420 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.222 ? metalc ? metalc7 C FE FE . A FE 202 1_555 D O HOH . A HOH 420 79_665 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc8 C FE FE . A FE 202 1_555 D O HOH . A HOH 452 79_665 ? ? ? ? ? ? ? ? ? ? ? ? 2.791 ? # _chem_comp.formula 'Fe 3' _chem_comp.formula_weight 55.845 _chem_comp.id FE _chem_comp.mon_nstd_flag . _chem_comp.name 'FE (III) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6GKB _atom_sites.fract_transf_matrix[1][1] 0.00566 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00566 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00566 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FE A 1 201 1 FE FE . C 2 FE A 1 202 3 FE FE . D 3 HOH A 1 301 95 HOH HOH . D 3 HOH A 2 302 151 HOH HOH . D 3 HOH A 3 303 8 HOH HOH . D 3 HOH A 4 304 57 HOH HOH . D 3 HOH A 5 305 153 HOH HOH . D 3 HOH A 6 306 1 HOH HOH . D 3 HOH A 7 307 4 HOH HOH . D 3 HOH A 8 308 101 HOH HOH . D 3 HOH A 9 309 52 HOH HOH . D 3 HOH A 10 310 81 HOH HOH . D 3 HOH A 11 311 119 HOH HOH . D 3 HOH A 12 312 15 HOH HOH . D 3 HOH A 13 313 3 HOH HOH . D 3 HOH A 14 314 43 HOH HOH . D 3 HOH A 15 315 2 HOH HOH . D 3 HOH A 16 316 35 HOH HOH . D 3 HOH A 17 317 25 HOH HOH . D 3 HOH A 18 318 33 HOH HOH . D 3 HOH A 19 319 111 HOH HOH . D 3 HOH A 20 320 120 HOH HOH . D 3 HOH A 21 321 53 HOH HOH . D 3 HOH A 22 322 91 HOH HOH . D 3 HOH A 23 323 128 HOH HOH . D 3 HOH A 24 324 44 HOH HOH . D 3 HOH A 25 325 21 HOH HOH . D 3 HOH A 26 326 23 HOH HOH . D 3 HOH A 27 327 54 HOH HOH . D 3 HOH A 28 328 28 HOH HOH . D 3 HOH A 29 329 55 HOH HOH . D 3 HOH A 30 330 116 HOH HOH . D 3 HOH A 31 331 6 HOH HOH . D 3 HOH A 32 332 12 HOH HOH . D 3 HOH A 33 333 80 HOH HOH . D 3 HOH A 34 334 9 HOH HOH . D 3 HOH A 35 335 86 HOH HOH . D 3 HOH A 36 336 90 HOH HOH . D 3 HOH A 37 337 56 HOH HOH . D 3 HOH A 38 338 106 HOH HOH . D 3 HOH A 39 339 149 HOH HOH . D 3 HOH A 40 340 18 HOH HOH . D 3 HOH A 41 341 131 HOH HOH . D 3 HOH A 42 342 69 HOH HOH . D 3 HOH A 43 343 71 HOH HOH . D 3 HOH A 44 344 41 HOH HOH . D 3 HOH A 45 345 144 HOH HOH . D 3 HOH A 46 346 29 HOH HOH . D 3 HOH A 47 347 40 HOH HOH . D 3 HOH A 48 348 38 HOH HOH . D 3 HOH A 49 349 26 HOH HOH . D 3 HOH A 50 350 113 HOH HOH . D 3 HOH A 51 351 142 HOH HOH . D 3 HOH A 52 352 114 HOH HOH . D 3 HOH A 53 353 46 HOH HOH . D 3 HOH A 54 354 45 HOH HOH . D 3 HOH A 55 355 37 HOH HOH . D 3 HOH A 56 356 60 HOH HOH . D 3 HOH A 57 357 94 HOH HOH . D 3 HOH A 58 358 93 HOH HOH . D 3 HOH A 59 359 97 HOH HOH . D 3 HOH A 60 360 117 HOH HOH . D 3 HOH A 61 361 75 HOH HOH . D 3 HOH A 62 362 62 HOH HOH . D 3 HOH A 63 363 17 HOH HOH . D 3 HOH A 64 364 85 HOH HOH . D 3 HOH A 65 365 58 HOH HOH . D 3 HOH A 66 366 98 HOH HOH . D 3 HOH A 67 367 31 HOH HOH . D 3 HOH A 68 368 49 HOH HOH . D 3 HOH A 69 369 65 HOH HOH . D 3 HOH A 70 370 84 HOH HOH . D 3 HOH A 71 371 108 HOH HOH . D 3 HOH A 72 372 39 HOH HOH . D 3 HOH A 73 373 115 HOH HOH . D 3 HOH A 74 374 51 HOH HOH . D 3 HOH A 75 375 121 HOH HOH . D 3 HOH A 76 376 32 HOH HOH . D 3 HOH A 77 377 89 HOH HOH . D 3 HOH A 78 378 61 HOH HOH . D 3 HOH A 79 379 36 HOH HOH . D 3 HOH A 80 380 150 HOH HOH . D 3 HOH A 81 381 137 HOH HOH . D 3 HOH A 82 382 87 HOH HOH . D 3 HOH A 83 383 66 HOH HOH . D 3 HOH A 84 384 136 HOH HOH . D 3 HOH A 85 385 10 HOH HOH . D 3 HOH A 86 386 59 HOH HOH . D 3 HOH A 87 387 124 HOH HOH . D 3 HOH A 88 388 74 HOH HOH . D 3 HOH A 89 389 125 HOH HOH . D 3 HOH A 90 390 16 HOH HOH . D 3 HOH A 91 391 72 HOH HOH . D 3 HOH A 92 392 133 HOH HOH . D 3 HOH A 93 393 48 HOH HOH . D 3 HOH A 94 394 14 HOH HOH . D 3 HOH A 95 395 20 HOH HOH . D 3 HOH A 96 396 123 HOH HOH . D 3 HOH A 97 397 112 HOH HOH . D 3 HOH A 98 398 11 HOH HOH . D 3 HOH A 99 399 100 HOH HOH . D 3 HOH A 100 400 63 HOH HOH . D 3 HOH A 101 401 105 HOH HOH . D 3 HOH A 102 402 118 HOH HOH . D 3 HOH A 103 403 99 HOH HOH . D 3 HOH A 104 404 148 HOH HOH . D 3 HOH A 105 405 130 HOH HOH . D 3 HOH A 106 406 24 HOH HOH . D 3 HOH A 107 407 135 HOH HOH . D 3 HOH A 108 408 5 HOH HOH . D 3 HOH A 109 409 13 HOH HOH . D 3 HOH A 110 410 47 HOH HOH . D 3 HOH A 111 411 76 HOH HOH . D 3 HOH A 112 412 141 HOH HOH . D 3 HOH A 113 413 126 HOH HOH . D 3 HOH A 114 414 82 HOH HOH . D 3 HOH A 115 415 152 HOH HOH . D 3 HOH A 116 416 132 HOH HOH . D 3 HOH A 117 417 7 HOH HOH . D 3 HOH A 118 418 83 HOH HOH . D 3 HOH A 119 419 68 HOH HOH . D 3 HOH A 120 420 109 HOH HOH . D 3 HOH A 121 421 103 HOH HOH . D 3 HOH A 122 422 19 HOH HOH . D 3 HOH A 123 423 139 HOH HOH . D 3 HOH A 124 424 30 HOH HOH . D 3 HOH A 125 425 27 HOH HOH . D 3 HOH A 126 426 78 HOH HOH . D 3 HOH A 127 427 102 HOH HOH . D 3 HOH A 128 428 104 HOH HOH . D 3 HOH A 129 429 64 HOH HOH . D 3 HOH A 130 430 67 HOH HOH . D 3 HOH A 131 431 122 HOH HOH . D 3 HOH A 132 432 129 HOH HOH . D 3 HOH A 133 433 110 HOH HOH . D 3 HOH A 134 434 127 HOH HOH . D 3 HOH A 135 435 88 HOH HOH . D 3 HOH A 136 436 146 HOH HOH . D 3 HOH A 137 437 42 HOH HOH . D 3 HOH A 138 438 22 HOH HOH . D 3 HOH A 139 439 138 HOH HOH . D 3 HOH A 140 440 73 HOH HOH . D 3 HOH A 141 441 77 HOH HOH . D 3 HOH A 142 442 96 HOH HOH . D 3 HOH A 143 443 50 HOH HOH . D 3 HOH A 144 444 70 HOH HOH . D 3 HOH A 145 445 140 HOH HOH . D 3 HOH A 146 446 92 HOH HOH . D 3 HOH A 147 447 107 HOH HOH . D 3 HOH A 148 448 34 HOH HOH . D 3 HOH A 149 449 143 HOH HOH . D 3 HOH A 150 450 79 HOH HOH . D 3 HOH A 151 451 134 HOH HOH . D 3 HOH A 152 452 147 HOH HOH . D 3 HOH A 153 453 145 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol FE _atom_site.label_atom_id FE _atom_site.label_comp_id FE _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 52.712 _atom_site.Cartn_y 188.087 _atom_site.Cartn_z 205.711 _atom_site.occupancy 0.75 _atom_site.B_iso_or_equiv 41.77 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id FE _atom_site.auth_comp_id FE _atom_site.auth_seq_id 201 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 1188 _model_server_stats.encode_time_ms 15 _model_server_stats.element_count 1 #