data_6GL3 # _model_server_result.job_id ujWlobXoMCoU8shQ96Hw3g _model_server_result.datetime_utc '2025-03-04 07:52:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6gl3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":801}' # _entry.id 6GL3 # _exptl.entry_id 6GL3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 410.473 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3~{S})-4-(6-azanyl-1-methyl-pyrazolo[3,4-d]pyrimidin-4-yl)-~{N}-(4-methoxy-2-methyl-phenyl)-3-methyl-piperazine-1-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6GL3 _cell.length_a 64.468 _cell.length_b 69.484 _cell.length_c 172.84 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6GL3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D 1 1 B 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H26 N8 O2' _chem_comp.formula_weight 410.473 _chem_comp.id EMW _chem_comp.mon_nstd_flag . _chem_comp.name (3~{S})-4-(6-azanyl-1-methyl-pyrazolo[3,4-d]pyrimidin-4-yl)-~{N}-(4-methoxy-2-methyl-phenyl)-3-methyl-piperazine-1-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N26 N27 EMW sing 83 n y N26 C25 EMW doub 84 n y C28 N27 EMW sing 85 n n N27 C23 EMW sing 86 n y C25 C24 EMW sing 87 n y C23 C24 EMW doub 88 n y C23 N22 EMW sing 89 n y C24 C18 EMW sing 90 n y C14 C12 EMW sing 91 n n N22 C20 EMW doub 92 n y C18 N15 EMW sing 93 n n C18 N19 EMW doub 94 n y C12 N15 EMW sing 95 n n C12 C11 EMW sing 96 n n N15 C16 EMW sing 97 n n C20 N19 EMW sing 98 n y C20 N21 EMW sing 99 n n C16 C17 EMW sing 100 n n C30 C29 EMW sing 101 n n C11 N10 EMW sing 102 n n N10 C17 EMW sing 103 n n N10 C8 EMW sing 104 n n C29 C31 EMW doub 105 n y C29 C6 EMW sing 106 n y N7 C8 EMW sing 107 n n N7 C6 EMW sing 108 n n C8 O9 EMW doub 109 n n C31 C3 EMW sing 110 n y C6 C5 EMW doub 111 n y C3 O2 EMW sing 112 n n C3 C4 EMW doub 113 n y C5 C4 EMW sing 114 n y O2 C1 EMW sing 115 n n C1 H1 EMW sing 116 n n C1 H2 EMW sing 117 n n C1 H3 EMW sing 118 n n C4 H4 EMW sing 119 n n C5 H5 EMW sing 120 n n C11 H6 EMW sing 121 n n C11 H7 EMW sing 122 n n C12 H8 EMW sing 123 n n C16 H9 EMW sing 124 n n C16 H10 EMW sing 125 n n C17 H11 EMW sing 126 n n C17 H12 EMW sing 127 n n C30 H13 EMW sing 128 n n C30 H14 EMW sing 129 n n C30 H15 EMW sing 130 n n C31 H16 EMW sing 131 n n N7 H17 EMW sing 132 n n C14 H18 EMW sing 133 n n C14 H19 EMW sing 134 n n C14 H20 EMW sing 135 n n N21 H21 EMW sing 136 n n N21 H22 EMW sing 137 n n C25 H23 EMW sing 138 n n C28 H24 EMW sing 139 n n C28 H25 EMW sing 140 n n C28 H26 EMW sing 141 n n # _atom_sites.entry_id 6GL3 _atom_sites.fract_transf_matrix[1][1] 0.015512 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014392 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005786 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EMW A 1 801 1 EMW INX . D 3 HOH A 1 901 17 HOH HOH . D 3 HOH A 2 902 26 HOH HOH . D 3 HOH A 3 903 15 HOH HOH . D 3 HOH A 4 904 40 HOH HOH . D 3 HOH A 5 905 50 HOH HOH . D 3 HOH A 6 906 1 HOH HOH . D 3 HOH A 7 907 11 HOH HOH . D 3 HOH A 8 908 79 HOH HOH . D 3 HOH A 9 909 24 HOH HOH . D 3 HOH A 10 910 44 HOH HOH . D 3 HOH A 11 911 3 HOH HOH . D 3 HOH A 12 912 9 HOH HOH . D 3 HOH A 13 913 18 HOH HOH . D 3 HOH A 14 914 8 HOH HOH . D 3 HOH A 15 915 16 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EMW . . . C 2 -47.174 -7.143 8.405 1 60.27 ? C1 EMW 801 A 1 HETATM 2 C C3 EMW . . . C 2 -45.644 -8.693 7.424 1 45.08 ? C3 EMW 801 A 1 HETATM 3 C C4 EMW . . . C 2 -44.763 -9.531 8.091 1 46.99 ? C4 EMW 801 A 1 HETATM 4 C C5 EMW . . . C 2 -43.511 -9.794 7.573 1 37.76 ? C5 EMW 801 A 1 HETATM 5 C C6 EMW . . . C 2 -43.093 -9.248 6.337 1 41.05 ? C6 EMW 801 A 1 HETATM 6 C C8 EMW . . . C 2 -41.084 -10.7 5.868 1 29.46 ? C8 EMW 801 A 1 HETATM 7 O O9 EMW . . . C 2 -41.555 -11.677 6.432 1 28.78 ? O9 EMW 801 A 1 HETATM 8 N N10 EMW . . . C 2 -39.822 -10.841 5.323 1 33.47 ? N10 EMW 801 A 1 HETATM 9 C C11 EMW . . . C 2 -39.139 -9.751 4.579 1 30.13 ? C11 EMW 801 A 1 HETATM 10 C C12 EMW . . . C 2 -38.815 -10.244 3.171 1 27.1 ? C12 EMW 801 A 1 HETATM 11 C C16 EMW . . . C 2 -38.425 -12.529 4.081 1 28.44 ? C16 EMW 801 A 1 HETATM 12 C C17 EMW . . . C 2 -38.994 -12.095 5.435 1 25.72 ? C17 EMW 801 A 1 HETATM 13 C C18 EMW . . . C 2 -36.472 -11.218 3.073 1 25.7 ? C18 EMW 801 A 1 HETATM 14 N N22 EMW . . . C 2 -33.712 -11.247 2.777 1 31.19 ? N22 EMW 801 A 1 HETATM 15 C C23 EMW . . . C 2 -34.421 -10.408 2 1 33.4 ? C23 EMW 801 A 1 HETATM 16 C C24 EMW . . . C 2 -35.843 -10.346 2.106 1 26.52 ? C24 EMW 801 A 1 HETATM 17 C C30 EMW . . . C 2 -43.667 -7.721 4.319 1 35.81 ? C30 EMW 801 A 1 HETATM 18 C C31 EMW . . . C 2 -45.255 -8.124 6.205 1 39.81 ? C31 EMW 801 A 1 HETATM 19 O O2 EMW . . . C 2 -46.866 -8.471 7.985 1 44.64 ? O2 EMW 801 A 1 HETATM 20 N N7 EMW . . . C 2 -41.808 -9.523 5.795 1 30.39 ? N7 EMW 801 A 1 HETATM 21 C C14 EMW . . . C 2 -40.059 -10.59 2.339 1 29.62 ? C14 EMW 801 A 1 HETATM 22 N N15 EMW . . . C 2 -37.845 -11.338 3.384 1 28.57 ? N15 EMW 801 A 1 HETATM 23 N N19 EMW . . . C 2 -35.649 -12.001 3.776 1 25.97 ? N19 EMW 801 A 1 HETATM 24 C C20 EMW . . . C 2 -34.334 -12.036 3.642 1 28 ? C20 EMW 801 A 1 HETATM 25 N N21 EMW . . . C 2 -33.631 -12.923 4.435 1 29.41 ? N21 EMW 801 A 1 HETATM 26 C C25 EMW . . . C 2 -36.225 -9.361 1.15 1 29.06 ? C25 EMW 801 A 1 HETATM 27 N N26 EMW . . . C 2 -35.18 -8.877 0.552 1 32.55 ? N26 EMW 801 A 1 HETATM 28 N N27 EMW . . . C 2 -34.054 -9.515 1.047 1 34.02 ? N27 EMW 801 A 1 HETATM 29 C C28 EMW . . . C 2 -32.695 -9.234 0.635 1 37.86 ? C28 EMW 801 A 1 HETATM 30 C C29 EMW . . . C 2 -43.992 -8.384 5.65 1 40.62 ? C29 EMW 801 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 30 #