data_6GLI # _model_server_result.job_id zFtusvuyjNruUMWeHXouKA _model_server_result.datetime_utc '2024-11-08 15:01:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6gli # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 6GLI # _exptl.entry_id 6GLI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 171.199 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-phenylpyrimidin-2-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6GLI _cell.length_a 36.246 _cell.length_b 60.275 _cell.length_c 66.208 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6GLI _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H9 N3' _chem_comp.formula_weight 171.199 _chem_comp.id F3E _chem_comp.mon_nstd_flag . _chem_comp.name 4-phenylpyrimidin-2-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N03 C04 F3E doub 83 n y N03 C02 F3E sing 84 n y C04 C05 F3E sing 85 n y N01 C02 F3E sing 86 n n C02 N13 F3E doub 87 n y C05 C06 F3E doub 88 n y N13 C06 F3E sing 89 n y C06 C07 F3E sing 90 n n C07 C08 F3E doub 91 n y C07 C12 F3E sing 92 n y C08 C09 F3E sing 93 n y C12 C11 F3E doub 94 n y C09 C10 F3E doub 95 n y C11 C10 F3E sing 96 n y C10 H1 F3E sing 97 n n C04 H2 F3E sing 98 n n C05 H3 F3E sing 99 n n C08 H4 F3E sing 100 n n C09 H5 F3E sing 101 n n C11 H6 F3E sing 102 n n C12 H7 F3E sing 103 n n N01 H8 F3E sing 104 n n N01 H9 F3E sing 105 n n # _atom_sites.entry_id 6GLI _atom_sites.fract_transf_matrix[1][1] 0.027589 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016591 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015104 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 F3E A 1 201 1 F3E LIG . C 3 HOH A 1 301 198 HOH HOH . C 3 HOH A 2 302 207 HOH HOH . C 3 HOH A 3 303 166 HOH HOH . C 3 HOH A 4 304 12 HOH HOH . C 3 HOH A 5 305 118 HOH HOH . C 3 HOH A 6 306 211 HOH HOH . C 3 HOH A 7 307 67 HOH HOH . C 3 HOH A 8 308 147 HOH HOH . C 3 HOH A 9 309 94 HOH HOH . C 3 HOH A 10 310 21 HOH HOH . C 3 HOH A 11 311 17 HOH HOH . C 3 HOH A 12 312 31 HOH HOH . C 3 HOH A 13 313 194 HOH HOH . C 3 HOH A 14 314 128 HOH HOH . C 3 HOH A 15 315 84 HOH HOH . C 3 HOH A 16 316 135 HOH HOH . C 3 HOH A 17 317 52 HOH HOH . C 3 HOH A 18 318 39 HOH HOH . C 3 HOH A 19 319 62 HOH HOH . C 3 HOH A 20 320 228 HOH HOH . C 3 HOH A 21 321 95 HOH HOH . C 3 HOH A 22 322 24 HOH HOH . C 3 HOH A 23 323 37 HOH HOH . C 3 HOH A 24 324 75 HOH HOH . C 3 HOH A 25 325 38 HOH HOH . C 3 HOH A 26 326 203 HOH HOH . C 3 HOH A 27 327 1 HOH HOH . C 3 HOH A 28 328 20 HOH HOH . C 3 HOH A 29 329 226 HOH HOH . C 3 HOH A 30 330 91 HOH HOH . C 3 HOH A 31 331 139 HOH HOH . C 3 HOH A 32 332 15 HOH HOH . C 3 HOH A 33 333 117 HOH HOH . C 3 HOH A 34 334 172 HOH HOH . C 3 HOH A 35 335 204 HOH HOH . C 3 HOH A 36 336 88 HOH HOH . C 3 HOH A 37 337 16 HOH HOH . C 3 HOH A 38 338 87 HOH HOH . C 3 HOH A 39 339 22 HOH HOH . C 3 HOH A 40 340 169 HOH HOH . C 3 HOH A 41 341 76 HOH HOH . C 3 HOH A 42 342 119 HOH HOH . C 3 HOH A 43 343 47 HOH HOH . C 3 HOH A 44 344 127 HOH HOH . C 3 HOH A 45 345 186 HOH HOH . C 3 HOH A 46 346 97 HOH HOH . C 3 HOH A 47 347 114 HOH HOH . C 3 HOH A 48 348 19 HOH HOH . C 3 HOH A 49 349 74 HOH HOH . C 3 HOH A 50 350 165 HOH HOH . C 3 HOH A 51 351 149 HOH HOH . C 3 HOH A 52 352 105 HOH HOH . C 3 HOH A 53 353 112 HOH HOH . C 3 HOH A 54 354 58 HOH HOH . C 3 HOH A 55 355 108 HOH HOH . C 3 HOH A 56 356 126 HOH HOH . C 3 HOH A 57 357 28 HOH HOH . C 3 HOH A 58 358 14 HOH HOH . C 3 HOH A 59 359 9 HOH HOH . C 3 HOH A 60 360 123 HOH HOH . C 3 HOH A 61 361 55 HOH HOH . C 3 HOH A 62 362 146 HOH HOH . C 3 HOH A 63 363 170 HOH HOH . C 3 HOH A 64 364 81 HOH HOH . C 3 HOH A 65 365 104 HOH HOH . C 3 HOH A 66 366 70 HOH HOH . C 3 HOH A 67 367 5 HOH HOH . C 3 HOH A 68 368 195 HOH HOH . C 3 HOH A 69 369 35 HOH HOH . C 3 HOH A 70 370 27 HOH HOH . C 3 HOH A 71 371 190 HOH HOH . C 3 HOH A 72 372 56 HOH HOH . C 3 HOH A 73 373 25 HOH HOH . C 3 HOH A 74 374 32 HOH HOH . C 3 HOH A 75 375 11 HOH HOH . C 3 HOH A 76 376 85 HOH HOH . C 3 HOH A 77 377 44 HOH HOH . C 3 HOH A 78 378 51 HOH HOH . C 3 HOH A 79 379 40 HOH HOH . C 3 HOH A 80 380 100 HOH HOH . C 3 HOH A 81 381 54 HOH HOH . C 3 HOH A 82 382 106 HOH HOH . C 3 HOH A 83 383 33 HOH HOH . C 3 HOH A 84 384 10 HOH HOH . C 3 HOH A 85 385 220 HOH HOH . C 3 HOH A 86 386 36 HOH HOH . C 3 HOH A 87 387 69 HOH HOH . C 3 HOH A 88 388 66 HOH HOH . C 3 HOH A 89 389 188 HOH HOH . C 3 HOH A 90 390 101 HOH HOH . C 3 HOH A 91 391 65 HOH HOH . C 3 HOH A 92 392 215 HOH HOH . C 3 HOH A 93 393 133 HOH HOH . C 3 HOH A 94 394 60 HOH HOH . C 3 HOH A 95 395 89 HOH HOH . C 3 HOH A 96 396 103 HOH HOH . C 3 HOH A 97 397 82 HOH HOH . C 3 HOH A 98 398 168 HOH HOH . C 3 HOH A 99 399 192 HOH HOH . C 3 HOH A 100 400 224 HOH HOH . C 3 HOH A 101 401 46 HOH HOH . C 3 HOH A 102 402 138 HOH HOH . C 3 HOH A 103 403 225 HOH HOH . C 3 HOH A 104 404 13 HOH HOH . C 3 HOH A 105 405 156 HOH HOH . C 3 HOH A 106 406 34 HOH HOH . C 3 HOH A 107 407 8 HOH HOH . C 3 HOH A 108 408 221 HOH HOH . C 3 HOH A 109 409 4 HOH HOH . C 3 HOH A 110 410 57 HOH HOH . C 3 HOH A 111 411 189 HOH HOH . C 3 HOH A 112 412 115 HOH HOH . C 3 HOH A 113 413 214 HOH HOH . C 3 HOH A 114 414 41 HOH HOH . C 3 HOH A 115 415 199 HOH HOH . C 3 HOH A 116 416 2 HOH HOH . C 3 HOH A 117 417 26 HOH HOH . C 3 HOH A 118 418 63 HOH HOH . C 3 HOH A 119 419 213 HOH HOH . C 3 HOH A 120 420 102 HOH HOH . C 3 HOH A 121 421 59 HOH HOH . C 3 HOH A 122 422 64 HOH HOH . C 3 HOH A 123 423 208 HOH HOH . C 3 HOH A 124 424 90 HOH HOH . C 3 HOH A 125 425 73 HOH HOH . C 3 HOH A 126 426 29 HOH HOH . C 3 HOH A 127 427 30 HOH HOH . C 3 HOH A 128 428 68 HOH HOH . C 3 HOH A 129 429 18 HOH HOH . C 3 HOH A 130 430 120 HOH HOH . C 3 HOH A 131 431 80 HOH HOH . C 3 HOH A 132 432 7 HOH HOH . C 3 HOH A 133 433 160 HOH HOH . C 3 HOH A 134 434 23 HOH HOH . C 3 HOH A 135 435 229 HOH HOH . C 3 HOH A 136 436 3 HOH HOH . C 3 HOH A 137 437 79 HOH HOH . C 3 HOH A 138 438 222 HOH HOH . C 3 HOH A 139 439 53 HOH HOH . C 3 HOH A 140 440 182 HOH HOH . C 3 HOH A 141 441 131 HOH HOH . C 3 HOH A 142 442 159 HOH HOH . C 3 HOH A 143 443 209 HOH HOH . C 3 HOH A 144 444 176 HOH HOH . C 3 HOH A 145 445 43 HOH HOH . C 3 HOH A 146 446 113 HOH HOH . C 3 HOH A 147 447 155 HOH HOH . C 3 HOH A 148 448 185 HOH HOH . C 3 HOH A 149 449 110 HOH HOH . C 3 HOH A 150 450 151 HOH HOH . C 3 HOH A 151 451 137 HOH HOH . C 3 HOH A 152 452 129 HOH HOH . C 3 HOH A 153 453 130 HOH HOH . C 3 HOH A 154 454 184 HOH HOH . C 3 HOH A 155 455 219 HOH HOH . C 3 HOH A 156 456 150 HOH HOH . C 3 HOH A 157 457 78 HOH HOH . C 3 HOH A 158 458 71 HOH HOH . C 3 HOH A 159 459 116 HOH HOH . C 3 HOH A 160 460 158 HOH HOH . C 3 HOH A 161 461 161 HOH HOH . C 3 HOH A 162 462 210 HOH HOH . C 3 HOH A 163 463 125 HOH HOH . C 3 HOH A 164 464 216 HOH HOH . C 3 HOH A 165 465 144 HOH HOH . C 3 HOH A 166 466 42 HOH HOH . C 3 HOH A 167 467 77 HOH HOH . C 3 HOH A 168 468 83 HOH HOH . C 3 HOH A 169 469 136 HOH HOH . C 3 HOH A 170 470 92 HOH HOH . C 3 HOH A 171 471 201 HOH HOH . C 3 HOH A 172 472 48 HOH HOH . C 3 HOH A 173 473 164 HOH HOH . C 3 HOH A 174 474 61 HOH HOH . C 3 HOH A 175 475 140 HOH HOH . C 3 HOH A 176 476 152 HOH HOH . C 3 HOH A 177 477 45 HOH HOH . C 3 HOH A 178 478 187 HOH HOH . C 3 HOH A 179 479 93 HOH HOH . C 3 HOH A 180 480 183 HOH HOH . C 3 HOH A 181 481 142 HOH HOH . C 3 HOH A 182 482 132 HOH HOH . C 3 HOH A 183 483 148 HOH HOH . C 3 HOH A 184 484 173 HOH HOH . C 3 HOH A 185 485 98 HOH HOH . C 3 HOH A 186 486 197 HOH HOH . C 3 HOH A 187 487 217 HOH HOH . C 3 HOH A 188 488 121 HOH HOH . C 3 HOH A 189 489 145 HOH HOH . C 3 HOH A 190 490 111 HOH HOH . C 3 HOH A 191 491 227 HOH HOH . C 3 HOH A 192 492 72 HOH HOH . C 3 HOH A 193 493 163 HOH HOH . C 3 HOH A 194 494 171 HOH HOH . C 3 HOH A 195 495 99 HOH HOH . C 3 HOH A 196 496 196 HOH HOH . C 3 HOH A 197 497 49 HOH HOH . C 3 HOH A 198 498 193 HOH HOH . C 3 HOH A 199 499 143 HOH HOH . C 3 HOH A 200 500 200 HOH HOH . C 3 HOH A 201 501 206 HOH HOH . C 3 HOH A 202 502 96 HOH HOH . C 3 HOH A 203 503 223 HOH HOH . C 3 HOH A 204 504 167 HOH HOH . C 3 HOH A 205 505 154 HOH HOH . C 3 HOH A 206 506 153 HOH HOH . C 3 HOH A 207 507 218 HOH HOH . C 3 HOH A 208 508 107 HOH HOH . C 3 HOH A 209 509 212 HOH HOH . C 3 HOH A 210 510 202 HOH HOH . C 3 HOH A 211 511 178 HOH HOH . C 3 HOH A 212 512 175 HOH HOH . C 3 HOH A 213 513 205 HOH HOH . C 3 HOH A 214 514 86 HOH HOH . C 3 HOH A 215 515 50 HOH HOH . C 3 HOH A 216 516 157 HOH HOH . C 3 HOH A 217 517 177 HOH HOH . C 3 HOH A 218 518 162 HOH HOH . C 3 HOH A 219 519 179 HOH HOH . C 3 HOH A 220 520 230 HOH HOH . C 3 HOH A 221 521 180 HOH HOH . C 3 HOH A 222 522 181 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 F3E . A . B 2 -13.738 -11.475 10.177 0.5 21.79 ? C10 F3E 201 A 1 HETATM 2 C C10 F3E . B . B 2 -13.624 -11.398 10.196 0.5 21.77 ? C10 F3E 201 A 1 HETATM 3 C C02 F3E . A . B 2 -13.043 -17.23 12.442 0.5 16.09 ? C02 F3E 201 A 1 HETATM 4 C C02 F3E . B . B 2 -14.746 -17.464 10.914 0.5 18.05 ? C02 F3E 201 A 1 HETATM 5 C C04 F3E . A . B 2 -14.716 -17.737 10.939 0.5 15.73 ? C04 F3E 201 A 1 HETATM 6 C C04 F3E . B . B 2 -12.977 -17.358 12.379 0.5 15.7 ? C04 F3E 201 A 1 HETATM 7 C C05 F3E . A . B 2 -14.739 -16.4 10.558 0.5 20.53 ? C05 F3E 201 A 1 HETATM 8 C C05 F3E . B . B 2 -12.879 -16.004 12.082 0.5 21.21 ? C05 F3E 201 A 1 HETATM 9 C C06 F3E . A . B 2 -13.869 -15.517 11.171 0.5 23.81 ? C06 F3E 201 A 1 HETATM 10 C C06 F3E . B . B 2 -13.761 -15.437 11.171 0.5 24.04 ? C06 F3E 201 A 1 HETATM 11 C C07 F3E . A . B 2 -13.841 -14.17 10.832 0.5 19.41 ? C07 F3E 201 A 1 HETATM 12 C C07 F3E . B . B 2 -13.7 -14.089 10.847 0.5 19.25 ? C07 F3E 201 A 1 HETATM 13 C C08 F3E . A . B 2 -14.977 -13.53 10.37 0.5 21.69 ? C08 F3E 201 A 1 HETATM 14 C C08 F3E . B . B 2 -14.847 -13.452 10.403 0.5 21.75 ? C08 F3E 201 A 1 HETATM 15 C C09 F3E . A . B 2 -14.922 -12.181 10.047 0.5 25.26 ? C09 F3E 201 A 1 HETATM 16 C C09 F3E . B . B 2 -14.809 -12.104 10.078 0.5 25.26 ? C09 F3E 201 A 1 HETATM 17 C C11 F3E . A . B 2 -12.603 -12.116 10.64 0.5 17.49 ? C11 F3E 201 A 1 HETATM 18 C C11 F3E . B . B 2 -12.479 -12.035 10.642 0.5 17.48 ? C11 F3E 201 A 1 HETATM 19 C C12 F3E . A . B 2 -12.655 -13.464 10.964 0.5 21.43 ? C12 F3E 201 A 1 HETATM 20 C C12 F3E . B . B 2 -12.513 -13.384 10.967 0.5 21.47 ? C12 F3E 201 A 1 HETATM 21 N N01 F3E . A . B 2 -12.111 -17.662 13.466 0.5 11.09 ? N01 F3E 201 A 1 HETATM 22 N N01 F3E . B . B 2 -15.772 -18.253 10.275 0.5 15.53 ? N01 F3E 201 A 1 HETATM 23 N N03 F3E . A . B 2 -13.852 -18.099 11.873 0.5 17 ? N03 F3E 201 A 1 HETATM 24 N N03 F3E . B . B 2 -13.922 -18.042 11.767 0.5 16.95 ? N03 F3E 201 A 1 HETATM 25 N N13 F3E . A . B 2 -13.044 -15.953 12.107 0.5 20.97 ? N13 F3E 201 A 1 HETATM 26 N N13 F3E . B . B 2 -14.685 -16.182 10.61 0.5 19.49 ? N13 F3E 201 A 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 26 #