data_6GOB # _model_server_result.job_id g-pALHIRhzXVINf4piR5_g _model_server_result.datetime_utc '2024-10-18 12:31:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6gob # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":204}' # _entry.id 6GOB # _exptl.entry_id 6GOB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.005 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITRATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6GOB _cell.length_a 79.487 _cell.length_b 79.487 _cell.length_c 37.309 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6GOB _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.986 ? disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc1 A ND1 HIS 15 A HIS 15 1_555 J PD F6Q . A F6Q 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc2 A OD1 ASN 77 A ASN 77 1_555 C PD PD . A PD 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? metalc ? metalc3 A OD2 ASP 87 A ASP 87 1_555 B PD PD . A PD 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.945 ? metalc ? metalc4 A OD1 ASP 101 A ASP 101 1_555 H PD F6Q . A F6Q 207 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.693 ? metalc ? metalc5 A OD1 ASP 101 A ASP 101 1_555 H PD F6Q . A F6Q 207 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.936 ? metalc ? metalc6 B PD PD . A PD 201 1_555 O O HOH . A HOH 373 7_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? metalc ? metalc7 B PD PD . A PD 201 1_555 O O HOH . A HOH 393 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? metalc ? metalc8 C PD PD . A PD 202 1_555 O O HOH . A HOH 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc9 I PD F6Q . A F6Q 208 1_555 O O HOH . A HOH 330 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? metalc ? metalc10 I PD F6Q . A F6Q 208 1_555 O O HOH . A HOH 365 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? # _chem_comp.formula 'N O3 -1' _chem_comp.formula_weight 62.005 _chem_comp.id NO3 _chem_comp.mon_nstd_flag . _chem_comp.name 'NITRATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N O1 NO3 doub 280 n n N O2 NO3 sing 281 n n N O3 NO3 sing 282 n n # _atom_sites.entry_id 6GOB _atom_sites.fract_transf_matrix[1][1] 0.012581 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012581 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026803 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PD A 1 201 5 PD PD . C 2 PD A 1 202 6 PD PD . D 3 NO3 A 1 203 1 NO3 NO3 . E 3 NO3 A 1 204 2 NO3 NO3 . F 4 F6Q A 1 205 1 F6Q XXX . G 4 F6Q A 1 206 2 F6Q XXX . H 4 F6Q A 1 207 3 F6Q XXX . I 4 F6Q A 1 208 4 F6Q XXX . J 4 F6Q A 1 209 5 F6Q XXX . K 5 SO4 A 1 210 1 SO4 SO4 . L 5 SO4 A 1 211 2 SO4 SO4 . M 6 CL A 1 212 7 CL CL . N 6 CL A 1 213 8 CL CL . O 7 HOH A 1 301 125 HOH HOH . O 7 HOH A 2 302 133 HOH HOH . O 7 HOH A 3 303 94 HOH HOH . O 7 HOH A 4 304 64 HOH HOH . O 7 HOH A 5 305 7 HOH HOH . O 7 HOH A 6 306 128 HOH HOH . O 7 HOH A 7 307 37 HOH HOH . O 7 HOH A 8 308 91 HOH HOH . O 7 HOH A 9 309 167 HOH HOH . O 7 HOH A 10 310 24 HOH HOH . O 7 HOH A 11 311 137 HOH HOH . O 7 HOH A 12 312 86 HOH HOH . O 7 HOH A 13 313 144 HOH HOH . O 7 HOH A 14 314 36 HOH HOH . O 7 HOH A 15 315 102 HOH HOH . O 7 HOH A 16 316 93 HOH HOH . O 7 HOH A 17 317 3 HOH HOH . O 7 HOH A 18 318 153 HOH HOH . O 7 HOH A 19 319 19 HOH HOH . O 7 HOH A 20 320 5 HOH HOH . O 7 HOH A 21 321 68 HOH HOH . O 7 HOH A 22 322 140 HOH HOH . O 7 HOH A 23 323 83 HOH HOH . O 7 HOH A 24 324 4 HOH HOH . O 7 HOH A 25 325 1 HOH HOH . O 7 HOH A 26 326 129 HOH HOH . O 7 HOH A 27 327 77 HOH HOH . O 7 HOH A 28 328 56 HOH HOH . O 7 HOH A 29 329 52 HOH HOH . O 7 HOH A 30 330 89 HOH HOH . O 7 HOH A 31 331 48 HOH HOH . O 7 HOH A 32 332 163 HOH HOH . O 7 HOH A 33 333 32 HOH HOH . O 7 HOH A 34 334 39 HOH HOH . O 7 HOH A 35 335 164 HOH HOH . O 7 HOH A 36 336 50 HOH HOH . O 7 HOH A 37 337 34 HOH HOH . O 7 HOH A 38 338 151 HOH HOH . O 7 HOH A 39 339 95 HOH HOH . O 7 HOH A 40 340 43 HOH HOH . O 7 HOH A 41 341 59 HOH HOH . O 7 HOH A 42 342 8 HOH HOH . O 7 HOH A 43 343 98 HOH HOH . O 7 HOH A 44 344 105 HOH HOH . O 7 HOH A 45 345 72 HOH HOH . O 7 HOH A 46 346 101 HOH HOH . O 7 HOH A 47 347 135 HOH HOH . O 7 HOH A 48 348 134 HOH HOH . O 7 HOH A 49 349 16 HOH HOH . O 7 HOH A 50 350 26 HOH HOH . O 7 HOH A 51 351 162 HOH HOH . O 7 HOH A 52 352 38 HOH HOH . O 7 HOH A 53 353 35 HOH HOH . O 7 HOH A 54 354 22 HOH HOH . O 7 HOH A 55 355 113 HOH HOH . O 7 HOH A 56 356 20 HOH HOH . O 7 HOH A 57 357 6 HOH HOH . O 7 HOH A 58 358 138 HOH HOH . O 7 HOH A 59 359 146 HOH HOH . O 7 HOH A 60 360 71 HOH HOH . O 7 HOH A 61 361 108 HOH HOH . O 7 HOH A 62 362 157 HOH HOH . O 7 HOH A 63 363 2 HOH HOH . O 7 HOH A 64 364 47 HOH HOH . O 7 HOH A 65 365 88 HOH HOH . O 7 HOH A 66 366 63 HOH HOH . O 7 HOH A 67 367 126 HOH HOH . O 7 HOH A 68 368 29 HOH HOH . O 7 HOH A 69 369 15 HOH HOH . O 7 HOH A 70 370 165 HOH HOH . O 7 HOH A 71 371 73 HOH HOH . O 7 HOH A 72 372 53 HOH HOH . O 7 HOH A 73 373 121 HOH HOH . O 7 HOH A 74 374 21 HOH HOH . O 7 HOH A 75 375 118 HOH HOH . O 7 HOH A 76 376 9 HOH HOH . O 7 HOH A 77 377 116 HOH HOH . O 7 HOH A 78 378 27 HOH HOH . O 7 HOH A 79 379 44 HOH HOH . O 7 HOH A 80 380 57 HOH HOH . O 7 HOH A 81 381 152 HOH HOH . O 7 HOH A 82 382 143 HOH HOH . O 7 HOH A 83 383 147 HOH HOH . O 7 HOH A 84 384 141 HOH HOH . O 7 HOH A 85 385 75 HOH HOH . O 7 HOH A 86 386 107 HOH HOH . O 7 HOH A 87 387 110 HOH HOH . O 7 HOH A 88 388 12 HOH HOH . O 7 HOH A 89 389 18 HOH HOH . O 7 HOH A 90 390 60 HOH HOH . O 7 HOH A 91 391 122 HOH HOH . O 7 HOH A 92 392 123 HOH HOH . O 7 HOH A 93 393 120 HOH HOH . O 7 HOH A 94 394 66 HOH HOH . O 7 HOH A 95 395 65 HOH HOH . O 7 HOH A 96 396 90 HOH HOH . O 7 HOH A 97 397 67 HOH HOH . O 7 HOH A 98 398 13 HOH HOH . O 7 HOH A 99 399 103 HOH HOH . O 7 HOH A 100 400 132 HOH HOH . O 7 HOH A 101 401 80 HOH HOH . O 7 HOH A 102 402 100 HOH HOH . O 7 HOH A 103 403 28 HOH HOH . O 7 HOH A 104 404 127 HOH HOH . O 7 HOH A 105 405 150 HOH HOH . O 7 HOH A 106 406 119 HOH HOH . O 7 HOH A 107 407 109 HOH HOH . O 7 HOH A 108 408 131 HOH HOH . O 7 HOH A 109 409 76 HOH HOH . O 7 HOH A 110 410 79 HOH HOH . O 7 HOH A 111 411 69 HOH HOH . O 7 HOH A 112 412 145 HOH HOH . O 7 HOH A 113 413 149 HOH HOH . O 7 HOH A 114 414 117 HOH HOH . O 7 HOH A 115 415 166 HOH HOH . O 7 HOH A 116 416 45 HOH HOH . O 7 HOH A 117 417 46 HOH HOH . O 7 HOH A 118 418 130 HOH HOH . O 7 HOH A 119 419 70 HOH HOH . O 7 HOH A 120 420 82 HOH HOH . O 7 HOH A 121 421 92 HOH HOH . O 7 HOH A 122 422 17 HOH HOH . O 7 HOH A 123 423 58 HOH HOH . O 7 HOH A 124 424 148 HOH HOH . O 7 HOH A 125 425 87 HOH HOH . O 7 HOH A 126 426 42 HOH HOH . O 7 HOH A 127 427 96 HOH HOH . O 7 HOH A 128 428 156 HOH HOH . O 7 HOH A 129 429 106 HOH HOH . O 7 HOH A 130 430 111 HOH HOH . O 7 HOH A 131 431 154 HOH HOH . O 7 HOH A 132 432 54 HOH HOH . O 7 HOH A 133 433 40 HOH HOH . O 7 HOH A 134 434 136 HOH HOH . O 7 HOH A 135 435 25 HOH HOH . O 7 HOH A 136 436 155 HOH HOH . O 7 HOH A 137 437 51 HOH HOH . O 7 HOH A 138 438 81 HOH HOH . O 7 HOH A 139 439 142 HOH HOH . O 7 HOH A 140 440 139 HOH HOH . O 7 HOH A 141 441 114 HOH HOH . O 7 HOH A 142 442 84 HOH HOH . O 7 HOH A 143 443 99 HOH HOH . O 7 HOH A 144 444 104 HOH HOH . O 7 HOH A 145 445 97 HOH HOH . O 7 HOH A 146 446 49 HOH HOH . O 7 HOH A 147 447 78 HOH HOH . O 7 HOH A 148 448 159 HOH HOH . O 7 HOH A 149 449 160 HOH HOH . O 7 HOH A 150 450 161 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NO3 . . . E 3 -15.419 -14.842 -18.656 0.5 29.16 ? N NO3 204 A 1 HETATM 2 O O1 NO3 . . . E 3 -15.679 -15.268 -19.77 0.5 32.63 ? O1 NO3 204 A 1 HETATM 3 O O2 NO3 . . . E 3 -16.415 -14.839 -17.673 0.5 27.8 ? O2 NO3 204 A 1 HETATM 4 O O3 NO3 . . . E 3 -14.14 -14.35 -18.377 0.5 32.02 ? O3 NO3 204 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #