data_6GOD # _model_server_result.job_id MVpne9ddX9WLrQk_hMmXbg _model_server_result.datetime_utc '2024-11-25 01:33:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6god # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":204}' # _entry.id 6GOD # _exptl.entry_id 6GOD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6GOD _cell.length_a 78.76 _cell.length_b 78.76 _cell.length_c 77.18 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6GOD _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLY 10 A GLY 10 1_555 E MG MG . A MG 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.506 ? metalc ? metalc2 A OG SER 17 A SER 17 1_555 B MG MG . A MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? metalc ? metalc3 A OG1 THR 35 A THR 35 1_555 B MG MG . A MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc4 A O ALA 59 A ALA 59 1_555 E MG MG . A MG 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? metalc ? metalc5 A O GLY 60 A GLY 60 1_555 E MG MG . A MG 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? metalc ? metalc6 A OH TYR 96 A TYR 96 1_555 E MG MG . A MG 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? metalc ? metalc7 B MG MG . A MG 201 1_555 C O2G GNP . A GNP 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? metalc ? metalc8 B MG MG . A MG 201 1_555 C O1B GNP . A GNP 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? metalc ? metalc9 B MG MG . A MG 201 1_555 F O HOH . A HOH 326 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? metalc ? metalc10 B MG MG . A MG 201 1_555 F O HOH . A HOH 332 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.942 ? metalc ? metalc11 E MG MG . A MG 204 1_555 F O HOH . A HOH 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? metalc ? metalc12 E MG MG . A MG 204 1_555 F O HOH . A HOH 341 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.373 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6GOD _atom_sites.fract_transf_matrix[1][1] 0.012697 _atom_sites.fract_transf_matrix[1][2] 0.007331 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014661 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012957 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 201 202 MG MG . C 3 GNP A 1 202 201 GNP GNP . D 4 GOL A 1 203 203 GOL GOL . E 2 MG A 1 204 97 MG MG . F 5 HOH A 1 301 82 HOH HOH . F 5 HOH A 2 302 1 HOH HOH . F 5 HOH A 3 303 10 HOH HOH . F 5 HOH A 4 304 74 HOH HOH . F 5 HOH A 5 305 70 HOH HOH . F 5 HOH A 6 306 40 HOH HOH . F 5 HOH A 7 307 48 HOH HOH . F 5 HOH A 8 308 19 HOH HOH . F 5 HOH A 9 309 2 HOH HOH . F 5 HOH A 10 310 11 HOH HOH . F 5 HOH A 11 311 18 HOH HOH . F 5 HOH A 12 312 30 HOH HOH . F 5 HOH A 13 313 35 HOH HOH . F 5 HOH A 14 314 7 HOH HOH . F 5 HOH A 15 315 17 HOH HOH . F 5 HOH A 16 316 36 HOH HOH . F 5 HOH A 17 317 15 HOH HOH . F 5 HOH A 18 318 53 HOH HOH . F 5 HOH A 19 319 95 HOH HOH . F 5 HOH A 20 320 5 HOH HOH . F 5 HOH A 21 321 64 HOH HOH . F 5 HOH A 22 322 12 HOH HOH . F 5 HOH A 23 323 71 HOH HOH . F 5 HOH A 24 324 43 HOH HOH . F 5 HOH A 25 325 27 HOH HOH . F 5 HOH A 26 326 8 HOH HOH . F 5 HOH A 27 327 22 HOH HOH . F 5 HOH A 28 328 32 HOH HOH . F 5 HOH A 29 329 76 HOH HOH . F 5 HOH A 30 330 6 HOH HOH . F 5 HOH A 31 331 54 HOH HOH . F 5 HOH A 32 332 3 HOH HOH . F 5 HOH A 33 333 23 HOH HOH . F 5 HOH A 34 334 1 HOH HOH . F 5 HOH A 35 335 24 HOH HOH . F 5 HOH A 36 336 25 HOH HOH . F 5 HOH A 37 337 45 HOH HOH . F 5 HOH A 38 338 52 HOH HOH . F 5 HOH A 39 339 44 HOH HOH . F 5 HOH A 40 340 20 HOH HOH . F 5 HOH A 41 341 2 HOH HOH . F 5 HOH A 42 342 9 HOH HOH . F 5 HOH A 43 343 5 HOH HOH . F 5 HOH A 44 344 56 HOH HOH . F 5 HOH A 45 345 57 HOH HOH . F 5 HOH A 46 346 4 HOH HOH . F 5 HOH A 47 347 33 HOH HOH . F 5 HOH A 48 348 68 HOH HOH . F 5 HOH A 49 349 83 HOH HOH . F 5 HOH A 50 350 72 HOH HOH . F 5 HOH A 51 351 92 HOH HOH . F 5 HOH A 52 352 65 HOH HOH . F 5 HOH A 53 353 14 HOH HOH . F 5 HOH A 54 354 31 HOH HOH . F 5 HOH A 55 355 37 HOH HOH . F 5 HOH A 56 356 90 HOH HOH . F 5 HOH A 57 357 21 HOH HOH . F 5 HOH A 58 358 42 HOH HOH . F 5 HOH A 59 359 86 HOH HOH . F 5 HOH A 60 360 63 HOH HOH . F 5 HOH A 61 361 91 HOH HOH . F 5 HOH A 62 362 4 HOH HOH . F 5 HOH A 63 363 16 HOH HOH . F 5 HOH A 64 364 84 HOH HOH . F 5 HOH A 65 365 39 HOH HOH . F 5 HOH A 66 366 26 HOH HOH . F 5 HOH A 67 367 73 HOH HOH . F 5 HOH A 68 368 96 HOH HOH . F 5 HOH A 69 369 75 HOH HOH . F 5 HOH A 70 370 29 HOH HOH . F 5 HOH A 71 371 38 HOH HOH . F 5 HOH A 72 372 51 HOH HOH . F 5 HOH A 73 373 50 HOH HOH . F 5 HOH A 74 374 13 HOH HOH . F 5 HOH A 75 375 85 HOH HOH . F 5 HOH A 76 376 41 HOH HOH . F 5 HOH A 77 377 3 HOH HOH . F 5 HOH A 78 378 69 HOH HOH . F 5 HOH A 79 379 78 HOH HOH . F 5 HOH A 80 380 81 HOH HOH . F 5 HOH A 81 381 79 HOH HOH . F 5 HOH A 82 382 58 HOH HOH . F 5 HOH A 83 383 61 HOH HOH . F 5 HOH A 84 384 49 HOH HOH . F 5 HOH A 85 385 28 HOH HOH . F 5 HOH A 86 386 80 HOH HOH . F 5 HOH A 87 387 47 HOH HOH . F 5 HOH A 88 388 55 HOH HOH . F 5 HOH A 89 389 94 HOH HOH . F 5 HOH A 90 390 34 HOH HOH . F 5 HOH A 91 391 87 HOH HOH . F 5 HOH A 92 392 88 HOH HOH . F 5 HOH A 93 393 93 HOH HOH . F 5 HOH A 94 394 62 HOH HOH . F 5 HOH A 95 395 89 HOH HOH . F 5 HOH A 96 396 60 HOH HOH . F 5 HOH A 97 397 59 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 2 _atom_site.Cartn_x -12.152 _atom_site.Cartn_y -6.653 _atom_site.Cartn_z 18.489 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 28.33 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 204 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #