data_6GOI # _model_server_result.job_id v2nwqA6k4yguRqTY9jw5Yg _model_server_result.datetime_utc '2024-12-12 09:41:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6goi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":404}' # _entry.id 6GOI # _exptl.entry_id 6GOI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.005 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITRATE ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6GOI _cell.length_a 78.443 _cell.length_b 78.443 _cell.length_c 37.385 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6GOI _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? metalc ? metalc1 A NE2 HIS 15 A HIS 15 1_555 H PD PD . A PD 407 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.151 ? metalc ? metalc2 A ND1 HIS 15 A HIS 15 1_555 I PD PD . A PD 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? metalc ? metalc3 I PD PD . A PD 408 1_555 L S DMS . A DMS 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? metalc ? metalc4 I PD PD . A PD 408 1_555 L O DMS . A DMS 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.513 ? # _chem_comp.formula 'N O3 -1' _chem_comp.formula_weight 62.005 _chem_comp.id NO3 _chem_comp.mon_nstd_flag . _chem_comp.name 'NITRATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N O1 NO3 doub 246 n n N O2 NO3 sing 247 n n N O3 NO3 sing 248 n n # _atom_sites.entry_id 6GOI _atom_sites.fract_transf_matrix[1][1] 0.012748 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012748 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026749 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NO3 A 1 401 401 NO3 NO3 . C 2 NO3 A 1 402 408 NO3 NO3 . D 2 NO3 A 1 403 404 NO3 NO3 . E 2 NO3 A 1 404 405 NO3 NO3 . F 2 NO3 A 1 405 406 NO3 NO3 . G 2 NO3 A 1 406 407 NO3 NO3 . H 3 PD A 1 407 1 PD PD . I 3 PD A 1 408 2 PD PD . J 4 CL A 1 409 1 CL CL . K 4 CL A 1 410 2 CL CL . L 5 DMS A 1 411 1 DMS DMS . M 5 DMS A 1 412 2 DMS DMS . N 6 HOH A 1 501 59 HOH HOH . N 6 HOH A 2 502 2 HOH HOH . N 6 HOH A 3 503 13 HOH HOH . N 6 HOH A 4 504 35 HOH HOH . N 6 HOH A 5 505 3 HOH HOH . N 6 HOH A 6 506 113 HOH HOH . N 6 HOH A 7 507 62 HOH HOH . N 6 HOH A 8 508 132 HOH HOH . N 6 HOH A 9 509 54 HOH HOH . N 6 HOH A 10 510 135 HOH HOH . N 6 HOH A 11 511 111 HOH HOH . N 6 HOH A 12 512 79 HOH HOH . N 6 HOH A 13 513 96 HOH HOH . N 6 HOH A 14 514 41 HOH HOH . N 6 HOH A 15 515 51 HOH HOH . N 6 HOH A 16 516 95 HOH HOH . N 6 HOH A 17 517 42 HOH HOH . N 6 HOH A 18 518 134 HOH HOH . N 6 HOH A 19 519 43 HOH HOH . N 6 HOH A 20 520 26 HOH HOH . N 6 HOH A 21 521 17 HOH HOH . N 6 HOH A 22 522 29 HOH HOH . N 6 HOH A 23 523 19 HOH HOH . N 6 HOH A 24 524 34 HOH HOH . N 6 HOH A 25 525 14 HOH HOH . N 6 HOH A 26 526 24 HOH HOH . N 6 HOH A 27 527 7 HOH HOH . N 6 HOH A 28 528 22 HOH HOH . N 6 HOH A 29 529 49 HOH HOH . N 6 HOH A 30 530 97 HOH HOH . N 6 HOH A 31 531 11 HOH HOH . N 6 HOH A 32 532 103 HOH HOH . N 6 HOH A 33 533 30 HOH HOH . N 6 HOH A 34 534 27 HOH HOH . N 6 HOH A 35 535 32 HOH HOH . N 6 HOH A 36 536 100 HOH HOH . N 6 HOH A 37 537 75 HOH HOH . N 6 HOH A 38 538 66 HOH HOH . N 6 HOH A 39 539 88 HOH HOH . N 6 HOH A 40 540 12 HOH HOH . N 6 HOH A 41 541 136 HOH HOH . N 6 HOH A 42 542 65 HOH HOH . N 6 HOH A 43 543 108 HOH HOH . N 6 HOH A 44 544 56 HOH HOH . N 6 HOH A 45 545 37 HOH HOH . N 6 HOH A 46 546 69 HOH HOH . N 6 HOH A 47 547 6 HOH HOH . N 6 HOH A 48 548 68 HOH HOH . N 6 HOH A 49 549 23 HOH HOH . N 6 HOH A 50 550 36 HOH HOH . N 6 HOH A 51 551 8 HOH HOH . N 6 HOH A 52 552 87 HOH HOH . N 6 HOH A 53 553 39 HOH HOH . N 6 HOH A 54 554 72 HOH HOH . N 6 HOH A 55 555 45 HOH HOH . N 6 HOH A 56 556 63 HOH HOH . N 6 HOH A 57 557 5 HOH HOH . N 6 HOH A 58 558 44 HOH HOH . N 6 HOH A 59 559 61 HOH HOH . N 6 HOH A 60 560 102 HOH HOH . N 6 HOH A 61 561 101 HOH HOH . N 6 HOH A 62 562 80 HOH HOH . N 6 HOH A 63 563 124 HOH HOH . N 6 HOH A 64 564 109 HOH HOH . N 6 HOH A 65 565 15 HOH HOH . N 6 HOH A 66 566 78 HOH HOH . N 6 HOH A 67 567 28 HOH HOH . N 6 HOH A 68 568 91 HOH HOH . N 6 HOH A 69 569 4 HOH HOH . N 6 HOH A 70 570 46 HOH HOH . N 6 HOH A 71 571 38 HOH HOH . N 6 HOH A 72 572 70 HOH HOH . N 6 HOH A 73 573 71 HOH HOH . N 6 HOH A 74 574 81 HOH HOH . N 6 HOH A 75 575 53 HOH HOH . N 6 HOH A 76 576 64 HOH HOH . N 6 HOH A 77 577 16 HOH HOH . N 6 HOH A 78 578 92 HOH HOH . N 6 HOH A 79 579 60 HOH HOH . N 6 HOH A 80 580 131 HOH HOH . N 6 HOH A 81 581 89 HOH HOH . N 6 HOH A 82 582 133 HOH HOH . N 6 HOH A 83 583 112 HOH HOH . N 6 HOH A 84 584 98 HOH HOH . N 6 HOH A 85 585 47 HOH HOH . N 6 HOH A 86 586 84 HOH HOH . N 6 HOH A 87 587 25 HOH HOH . N 6 HOH A 88 588 76 HOH HOH . N 6 HOH A 89 589 90 HOH HOH . N 6 HOH A 90 590 40 HOH HOH . N 6 HOH A 91 591 58 HOH HOH . N 6 HOH A 92 592 104 HOH HOH . N 6 HOH A 93 593 83 HOH HOH . N 6 HOH A 94 594 55 HOH HOH . N 6 HOH A 95 595 33 HOH HOH . N 6 HOH A 96 596 106 HOH HOH . N 6 HOH A 97 597 115 HOH HOH . N 6 HOH A 98 598 67 HOH HOH . N 6 HOH A 99 599 94 HOH HOH . N 6 HOH A 100 600 73 HOH HOH . N 6 HOH A 101 601 107 HOH HOH . N 6 HOH A 102 602 110 HOH HOH . N 6 HOH A 103 603 74 HOH HOH . N 6 HOH A 104 604 137 HOH HOH . N 6 HOH A 105 605 52 HOH HOH . N 6 HOH A 106 606 50 HOH HOH . N 6 HOH A 107 607 82 HOH HOH . N 6 HOH A 108 608 77 HOH HOH . N 6 HOH A 109 609 57 HOH HOH . N 6 HOH A 110 610 138 HOH HOH . N 6 HOH A 111 611 86 HOH HOH . N 6 HOH A 112 612 85 HOH HOH . N 6 HOH A 113 613 105 HOH HOH . N 6 HOH A 114 614 99 HOH HOH . N 6 HOH A 115 615 114 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NO3 . . . E 2 -23.351 0.291 -24.217 1 40.5 ? N NO3 404 A 1 HETATM 2 O O1 NO3 . . . E 2 -23.271 -0.919 -24.341 1 41.47 ? O1 NO3 404 A 1 HETATM 3 O O2 NO3 . . . E 2 -22.203 1.123 -24.208 1 48.72 ? O2 NO3 404 A 1 HETATM 4 O O3 NO3 . . . E 2 -24.598 0.865 -24.081 1 39.57 ? O3 NO3 404 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 394 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 4 #