data_6GOJ # _model_server_result.job_id iQWqa7zZsVNULjw7jJBSAg _model_server_result.datetime_utc '2024-12-13 10:22:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6goj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 6GOJ # _exptl.entry_id 6GOJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.005 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITRATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6GOJ _cell.length_a 78.108 _cell.length_b 78.108 _cell.length_c 37.172 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6GOJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? metalc ? metalc1 A NH2 ARG 14 A ARG 14 1_555 C PT PT . A PT 202 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.45 ? metalc ? metalc2 A ND1 HIS 15 A HIS 15 1_555 B PT PT . A PT 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? metalc ? metalc3 A NE2 HIS 15 A HIS 15 1_555 C PT PT . A PT 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.552 ? metalc ? metalc4 B PT PT . A PT 201 1_555 H O HOH . A HOH 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? metalc ? metalc5 B PT PT . A PT 201 1_555 H O HOH . A HOH 405 7_554 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? # _chem_comp.formula 'N O3 -1' _chem_comp.formula_weight 62.005 _chem_comp.id NO3 _chem_comp.mon_nstd_flag . _chem_comp.name 'NITRATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N O1 NO3 doub 237 n n N O2 NO3 sing 238 n n N O3 NO3 sing 239 n n # _atom_sites.entry_id 6GOJ _atom_sites.fract_transf_matrix[1][1] 0.012803 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012803 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026902 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PT A 1 201 1 PT PT . C 2 PT A 1 202 2 PT PT . D 3 NO3 A 1 203 1 NO3 NO3 . E 3 NO3 A 1 204 2 NO3 NO3 . F 4 CL A 1 205 1 CL CL . G 4 CL A 1 206 2 CL CL . H 5 HOH A 1 301 10 HOH HOH . H 5 HOH A 2 302 114 HOH HOH . H 5 HOH A 3 303 13 HOH HOH . H 5 HOH A 4 304 43 HOH HOH . H 5 HOH A 5 305 101 HOH HOH . H 5 HOH A 6 306 44 HOH HOH . H 5 HOH A 7 307 6 HOH HOH . H 5 HOH A 8 308 49 HOH HOH . H 5 HOH A 9 309 30 HOH HOH . H 5 HOH A 10 310 47 HOH HOH . H 5 HOH A 11 311 57 HOH HOH . H 5 HOH A 12 312 105 HOH HOH . H 5 HOH A 13 313 27 HOH HOH . H 5 HOH A 14 314 116 HOH HOH . H 5 HOH A 15 315 16 HOH HOH . H 5 HOH A 16 316 118 HOH HOH . H 5 HOH A 17 317 81 HOH HOH . H 5 HOH A 18 318 91 HOH HOH . H 5 HOH A 19 319 20 HOH HOH . H 5 HOH A 20 320 90 HOH HOH . H 5 HOH A 21 321 119 HOH HOH . H 5 HOH A 22 322 55 HOH HOH . H 5 HOH A 23 323 23 HOH HOH . H 5 HOH A 24 324 108 HOH HOH . H 5 HOH A 25 325 4 HOH HOH . H 5 HOH A 26 326 22 HOH HOH . H 5 HOH A 27 327 92 HOH HOH . H 5 HOH A 28 328 31 HOH HOH . H 5 HOH A 29 329 110 HOH HOH . H 5 HOH A 30 330 38 HOH HOH . H 5 HOH A 31 331 14 HOH HOH . H 5 HOH A 32 332 52 HOH HOH . H 5 HOH A 33 333 21 HOH HOH . H 5 HOH A 34 334 50 HOH HOH . H 5 HOH A 35 335 34 HOH HOH . H 5 HOH A 36 336 86 HOH HOH . H 5 HOH A 37 337 17 HOH HOH . H 5 HOH A 38 338 82 HOH HOH . H 5 HOH A 39 339 28 HOH HOH . H 5 HOH A 40 340 106 HOH HOH . H 5 HOH A 41 341 54 HOH HOH . H 5 HOH A 42 342 9 HOH HOH . H 5 HOH A 43 343 117 HOH HOH . H 5 HOH A 44 344 120 HOH HOH . H 5 HOH A 45 345 46 HOH HOH . H 5 HOH A 46 346 29 HOH HOH . H 5 HOH A 47 347 37 HOH HOH . H 5 HOH A 48 348 98 HOH HOH . H 5 HOH A 49 349 36 HOH HOH . H 5 HOH A 50 350 58 HOH HOH . H 5 HOH A 51 351 60 HOH HOH . H 5 HOH A 52 352 102 HOH HOH . H 5 HOH A 53 353 115 HOH HOH . H 5 HOH A 54 354 33 HOH HOH . H 5 HOH A 55 355 32 HOH HOH . H 5 HOH A 56 356 12 HOH HOH . H 5 HOH A 57 357 75 HOH HOH . H 5 HOH A 58 358 84 HOH HOH . H 5 HOH A 59 359 18 HOH HOH . H 5 HOH A 60 360 15 HOH HOH . H 5 HOH A 61 361 103 HOH HOH . H 5 HOH A 62 362 79 HOH HOH . H 5 HOH A 63 363 24 HOH HOH . H 5 HOH A 64 364 11 HOH HOH . H 5 HOH A 65 365 35 HOH HOH . H 5 HOH A 66 366 19 HOH HOH . H 5 HOH A 67 367 5 HOH HOH . H 5 HOH A 68 368 65 HOH HOH . H 5 HOH A 69 369 51 HOH HOH . H 5 HOH A 70 370 100 HOH HOH . H 5 HOH A 71 371 112 HOH HOH . H 5 HOH A 72 372 39 HOH HOH . H 5 HOH A 73 373 78 HOH HOH . H 5 HOH A 74 374 64 HOH HOH . H 5 HOH A 75 375 72 HOH HOH . H 5 HOH A 76 376 2 HOH HOH . H 5 HOH A 77 377 63 HOH HOH . H 5 HOH A 78 378 45 HOH HOH . H 5 HOH A 79 379 93 HOH HOH . H 5 HOH A 80 380 42 HOH HOH . H 5 HOH A 81 381 40 HOH HOH . H 5 HOH A 82 382 71 HOH HOH . H 5 HOH A 83 383 77 HOH HOH . H 5 HOH A 84 384 76 HOH HOH . H 5 HOH A 85 385 26 HOH HOH . H 5 HOH A 86 386 96 HOH HOH . H 5 HOH A 87 387 62 HOH HOH . H 5 HOH A 88 388 107 HOH HOH . H 5 HOH A 89 389 113 HOH HOH . H 5 HOH A 90 390 53 HOH HOH . H 5 HOH A 91 391 73 HOH HOH . H 5 HOH A 92 392 59 HOH HOH . H 5 HOH A 93 393 74 HOH HOH . H 5 HOH A 94 394 25 HOH HOH . H 5 HOH A 95 395 89 HOH HOH . H 5 HOH A 96 396 94 HOH HOH . H 5 HOH A 97 397 66 HOH HOH . H 5 HOH A 98 398 61 HOH HOH . H 5 HOH A 99 399 83 HOH HOH . H 5 HOH A 100 400 80 HOH HOH . H 5 HOH A 101 401 41 HOH HOH . H 5 HOH A 102 402 8 HOH HOH . H 5 HOH A 103 403 56 HOH HOH . H 5 HOH A 104 404 88 HOH HOH . H 5 HOH A 105 405 111 HOH HOH . H 5 HOH A 106 406 104 HOH HOH . H 5 HOH A 107 407 68 HOH HOH . H 5 HOH A 108 408 109 HOH HOH . H 5 HOH A 109 409 87 HOH HOH . H 5 HOH A 110 410 97 HOH HOH . H 5 HOH A 111 411 121 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NO3 . . . D 3 -11.617 -10.948 -0.14 0.4 53.87 ? N NO3 203 A 1 HETATM 2 O O1 NO3 . . . D 3 -11.479 -12.158 -0.056 0.4 54.6 ? O1 NO3 203 A 1 HETATM 3 O O2 NO3 . . . D 3 -12.904 -10.395 -0.239 0.4 53.17 ? O2 NO3 203 A 1 HETATM 4 O O3 NO3 . . . D 3 -10.487 -10.12 -0.135 0.4 51.68 ? O3 NO3 203 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #