data_6GPV # _model_server_result.job_id FZgmJdLggFOlBTkShtu_0A _model_server_result.datetime_utc '2024-11-24 00:02:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6gpv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1002}' # _entry.id 6GPV # _exptl.entry_id 6GPV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6GPV _cell.length_a 40.5 _cell.length_b 40.5 _cell.length_c 133.76 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6GPV _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ASN 72 A ASN 72 1_555 A N F7Q 73 A F7Q 73 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.328 ? covale ? covale2 A C F7Q 73 A F7Q 73 1_555 A N THR 74 A THR 74 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale3 A C PHE 80 A PHE 80 1_555 A N NFK 81 A NFK 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.316 ? covale ? covale4 A C NFK 81 A NFK 81 1_555 A N ASN 82 A ASN 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale5 A C LEU 84 A LEU 84 1_555 A N HOO 85 A HOO 85 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.341 ? covale ? covale6 A C LEU 84 A LEU 84 1_555 A N OHI 85 A OHI 85 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.341 ? covale ? covale7 A C HOO 85 A HOO 85 1_555 A N LEU 86 A LEU 86 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.349 ? covale ? covale8 A C OHI 85 A OHI 85 1_555 A N LEU 86 A LEU 86 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.349 ? metalc ? metalc1 C MG MG . A MG 1002 1_555 F O HOH . A HOH 1104 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.07 ? metalc ? metalc2 C MG MG . A MG 1002 1_555 F O HOH . A HOH 1114 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.366 ? metalc ? metalc3 C MG MG . A MG 1002 1_555 F O HOH . A HOH 1116 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.074 ? metalc ? metalc4 C MG MG . A MG 1002 1_555 F O HOH . A HOH 1212 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.007 ? metalc ? metalc5 C MG MG . A MG 1002 1_555 F O HOH . A HOH 1216 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.048 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6GPV _atom_sites.fract_transf_matrix[1][1] 0.024691 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024691 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007476 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMN A 1 1001 1001 FMN FMN . C 3 MG A 1 1002 1 MG MG . D 4 CL A 1 1003 1002 CL CL . E 5 LUM A 1 1004 1 LUM LUM . F 6 HOH A 1 1101 123 HOH HOH . F 6 HOH A 2 1102 55 HOH HOH . F 6 HOH A 3 1103 120 HOH HOH . F 6 HOH A 4 1104 25 HOH HOH . F 6 HOH A 5 1105 38 HOH HOH . F 6 HOH A 6 1106 40 HOH HOH . F 6 HOH A 7 1107 78 HOH HOH . F 6 HOH A 8 1108 61 HOH HOH . F 6 HOH A 9 1109 107 HOH HOH . F 6 HOH A 10 1110 98 HOH HOH . F 6 HOH A 11 1111 114 HOH HOH . F 6 HOH A 12 1112 125 HOH HOH . F 6 HOH A 13 1113 124 HOH HOH . F 6 HOH A 14 1114 17 HOH HOH . F 6 HOH A 15 1115 70 HOH HOH . F 6 HOH A 16 1116 6 HOH HOH . F 6 HOH A 17 1117 100 HOH HOH . F 6 HOH A 18 1118 69 HOH HOH . F 6 HOH A 19 1119 33 HOH HOH . F 6 HOH A 20 1120 44 HOH HOH . F 6 HOH A 21 1121 109 HOH HOH . F 6 HOH A 22 1122 116 HOH HOH . F 6 HOH A 23 1123 64 HOH HOH . F 6 HOH A 24 1124 46 HOH HOH . F 6 HOH A 25 1125 14 HOH HOH . F 6 HOH A 26 1126 26 HOH HOH . F 6 HOH A 27 1127 22 HOH HOH . F 6 HOH A 28 1128 126 HOH HOH . F 6 HOH A 29 1129 21 HOH HOH . F 6 HOH A 30 1130 54 HOH HOH . F 6 HOH A 31 1131 73 HOH HOH . F 6 HOH A 32 1132 92 HOH HOH . F 6 HOH A 33 1133 8 HOH HOH . F 6 HOH A 34 1134 5 HOH HOH . F 6 HOH A 35 1135 18 HOH HOH . F 6 HOH A 36 1136 30 HOH HOH . F 6 HOH A 37 1137 67 HOH HOH . F 6 HOH A 38 1138 96 HOH HOH . F 6 HOH A 39 1139 19 HOH HOH . F 6 HOH A 40 1140 20 HOH HOH . F 6 HOH A 41 1141 117 HOH HOH . F 6 HOH A 42 1142 52 HOH HOH . F 6 HOH A 43 1143 122 HOH HOH . F 6 HOH A 44 1144 62 HOH HOH . F 6 HOH A 45 1145 4 HOH HOH . F 6 HOH A 46 1146 71 HOH HOH . F 6 HOH A 47 1147 59 HOH HOH . F 6 HOH A 48 1148 95 HOH HOH . F 6 HOH A 49 1149 84 HOH HOH . F 6 HOH A 50 1150 9 HOH HOH . F 6 HOH A 51 1151 29 HOH HOH . F 6 HOH A 52 1152 90 HOH HOH . F 6 HOH A 53 1153 103 HOH HOH . F 6 HOH A 54 1154 10 HOH HOH . F 6 HOH A 55 1155 51 HOH HOH . F 6 HOH A 56 1156 93 HOH HOH . F 6 HOH A 57 1157 45 HOH HOH . F 6 HOH A 58 1158 68 HOH HOH . F 6 HOH A 59 1159 1 HOH HOH . F 6 HOH A 60 1160 108 HOH HOH . F 6 HOH A 61 1161 57 HOH HOH . F 6 HOH A 62 1162 104 HOH HOH . F 6 HOH A 63 1163 43 HOH HOH . F 6 HOH A 64 1164 24 HOH HOH . F 6 HOH A 65 1165 36 HOH HOH . F 6 HOH A 66 1166 41 HOH HOH . F 6 HOH A 67 1167 15 HOH HOH . F 6 HOH A 68 1168 49 HOH HOH . F 6 HOH A 69 1169 3 HOH HOH . F 6 HOH A 70 1170 106 HOH HOH . F 6 HOH A 71 1171 7 HOH HOH . F 6 HOH A 72 1172 53 HOH HOH . F 6 HOH A 73 1173 11 HOH HOH . F 6 HOH A 74 1174 85 HOH HOH . F 6 HOH A 75 1175 115 HOH HOH . F 6 HOH A 76 1176 60 HOH HOH . F 6 HOH A 77 1177 12 HOH HOH . F 6 HOH A 78 1178 37 HOH HOH . F 6 HOH A 79 1179 112 HOH HOH . F 6 HOH A 80 1180 47 HOH HOH . F 6 HOH A 81 1181 119 HOH HOH . F 6 HOH A 82 1182 58 HOH HOH . F 6 HOH A 83 1183 74 HOH HOH . F 6 HOH A 84 1184 48 HOH HOH . F 6 HOH A 85 1185 65 HOH HOH . F 6 HOH A 86 1186 31 HOH HOH . F 6 HOH A 87 1187 2 HOH HOH . F 6 HOH A 88 1188 13 HOH HOH . F 6 HOH A 89 1189 102 HOH HOH . F 6 HOH A 90 1190 34 HOH HOH . F 6 HOH A 91 1191 99 HOH HOH . F 6 HOH A 92 1192 28 HOH HOH . F 6 HOH A 93 1193 77 HOH HOH . F 6 HOH A 94 1194 42 HOH HOH . F 6 HOH A 95 1195 66 HOH HOH . F 6 HOH A 96 1196 39 HOH HOH . F 6 HOH A 97 1197 88 HOH HOH . F 6 HOH A 98 1198 97 HOH HOH . F 6 HOH A 99 1199 105 HOH HOH . F 6 HOH A 100 1200 23 HOH HOH . F 6 HOH A 101 1201 16 HOH HOH . F 6 HOH A 102 1202 89 HOH HOH . F 6 HOH A 103 1203 82 HOH HOH . F 6 HOH A 104 1204 63 HOH HOH . F 6 HOH A 105 1205 111 HOH HOH . F 6 HOH A 106 1206 72 HOH HOH . F 6 HOH A 107 1207 50 HOH HOH . F 6 HOH A 108 1208 35 HOH HOH . F 6 HOH A 109 1209 87 HOH HOH . F 6 HOH A 110 1210 80 HOH HOH . F 6 HOH A 111 1211 56 HOH HOH . F 6 HOH A 112 1212 27 HOH HOH . F 6 HOH A 113 1213 81 HOH HOH . F 6 HOH A 114 1214 110 HOH HOH . F 6 HOH A 115 1215 118 HOH HOH . F 6 HOH A 116 1216 32 HOH HOH . F 6 HOH A 117 1217 86 HOH HOH . F 6 HOH A 118 1218 79 HOH HOH . F 6 HOH A 119 1219 113 HOH HOH . F 6 HOH A 120 1220 101 HOH HOH . F 6 HOH A 121 1221 83 HOH HOH . F 6 HOH A 122 1222 121 HOH HOH . F 6 HOH A 123 1223 75 HOH HOH . F 6 HOH A 124 1224 76 HOH HOH . F 6 HOH A 125 1225 91 HOH HOH . F 6 HOH A 126 1226 94 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id A _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -10.109 _atom_site.Cartn_y -7.62 _atom_site.Cartn_z -8.855 _atom_site.occupancy 0.75 _atom_site.B_iso_or_equiv 37.39 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 1002 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #