data_6GQX
#
_model_server_result.job_id            wmsFgOGOOV7a1lJqQHpmHQ 
_model_server_result.datetime_utc      '2024-11-02 12:26:20' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6gqx 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":203}' 
#
_entry.id    6GQX 
#
_exptl.entry_id    6GQX 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              363.473 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '[4-[[2-methoxy-4-(3-methoxyphenyl)phenyl]amino]phenyl]methyl-dimethyl-azanium' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6GQX 
_cell.length_a            63.187 
_cell.length_b            118.032 
_cell.length_c            156.371 
_cell.Z_PDB               20 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6GQX 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
? monomeric 1 author_defined_assembly 5 
? monomeric 1 author_defined_assembly 6 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,G,H,I,S 1 1 
B,J,K,L,T 2 1 
C,M,N,O,U 3 1 
D,P,V 4 1 
E,Q,W 5 1 
F,R,X 6 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 I N N 
? 5 L N N 
? 5 O N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG SER 21 A SER 17 1_555 G MG MG . A MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? 
metalc ? metalc2 A OG1 THR 39 A THR 35 1_555 G MG MG . A MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? 
metalc ? metalc3 G MG MG . A MG 201 1_555 H O2B GNP . A GNP 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? 
metalc ? metalc4 G MG MG . A MG 201 1_555 H O2G GNP . A GNP 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
metalc ? metalc5 G MG MG . A MG 201 1_555 S O HOH . A HOH 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? 
metalc ? metalc6 G MG MG . A MG 201 1_555 S O HOH . A HOH 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.997 ? 
metalc ? metalc7 B OG SER 20 B SER 17 1_555 J MG MG . B MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? 
metalc ? metalc8 B OG1 THR 38 B THR 35 1_555 J MG MG . B MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? 
metalc ? metalc9 J MG MG . B MG 201 1_555 K O2B GNP . B GNP 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.962 ? 
metalc ? metalc10 J MG MG . B MG 201 1_555 K O2G GNP . B GNP 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.988 ? 
metalc ? metalc11 J MG MG . B MG 201 1_555 T O HOH . B HOH 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? 
metalc ? metalc12 J MG MG . B MG 201 1_555 T O HOH . B HOH 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? 
metalc ? metalc13 C OG SER 21 C SER 17 1_555 M MG MG . C MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? 
metalc ? metalc14 C OG1 THR 39 C THR 35 1_555 M MG MG . C MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? 
metalc ? metalc15 M MG MG . C MG 201 1_555 N O1G GNP . C GNP 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? 
metalc ? metalc16 M MG MG . C MG 201 1_555 N O1B GNP . C GNP 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.776 ? 
metalc ? metalc17 M MG MG . C MG 201 1_555 U O HOH . C HOH 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? 
metalc ? metalc18 M MG MG . C MG 201 1_555 U O HOH . C HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? 
#
_chem_comp.formula           'C23 H27 N2 O2 1' 
_chem_comp.formula_weight    363.473 
_chem_comp.id                F8K 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '[4-[[2-methoxy-4-(3-methoxyphenyl)phenyl]amino]phenyl]methyl-dimethyl-azanium' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C3 C2 F8K doub 83 n y 
C3 C4 F8K sing 84 n y 
C2 C1 F8K sing 85 n y 
O13 C4 F8K sing 86 n n 
O13 C14 F8K sing 87 n n 
C4 C5 F8K doub 88 n y 
C1 C6 F8K doub 89 n y 
C5 C6 F8K sing 90 n y 
C6 C7 F8K sing 91 n n 
C8 C7 F8K doub 92 n y 
C8 C9 F8K sing 93 n y 
C7 C12 F8K sing 94 n y 
C9 C10 F8K doub 95 n y 
C12 C11 F8K doub 96 n y 
C10 C11 F8K sing 97 n y 
C10 N17 F8K sing 98 n n 
C20 C19 F8K doub 99 n y 
C20 C21 F8K sing 100 n y 
C11 O15 F8K sing 101 n n 
C19 C18 F8K sing 102 n y 
C24 C21 F8K sing 103 n n 
C24 N25 F8K sing 104 n n 
C21 C22 F8K doub 105 n y 
C18 N17 F8K sing 106 n n 
C18 C23 F8K doub 107 n y 
C22 C23 F8K sing 108 n y 
C27 N25 F8K sing 109 n n 
O15 C16 F8K sing 110 n n 
N25 C26 F8K sing 111 n n 
C1 H1 F8K sing 112 n n 
C2 H2 F8K sing 113 n n 
C3 H3 F8K sing 114 n n 
C5 H4 F8K sing 115 n n 
C8 H5 F8K sing 116 n n 
C9 H6 F8K sing 117 n n 
C12 H7 F8K sing 118 n n 
C14 H8 F8K sing 119 n n 
C14 H9 F8K sing 120 n n 
C14 H10 F8K sing 121 n n 
C16 H11 F8K sing 122 n n 
C16 H12 F8K sing 123 n n 
C16 H13 F8K sing 124 n n 
N17 H14 F8K sing 125 n n 
C19 H15 F8K sing 126 n n 
C20 H16 F8K sing 127 n n 
C22 H17 F8K sing 128 n n 
C23 H18 F8K sing 129 n n 
C24 H19 F8K sing 130 n n 
C24 H20 F8K sing 131 n n 
N25 H21 F8K sing 132 n n 
C26 H22 F8K sing 133 n n 
C26 H23 F8K sing 134 n n 
C26 H24 F8K sing 135 n n 
C27 H25 F8K sing 136 n n 
C27 H26 F8K sing 137 n n 
C27 H27 F8K sing 138 n n 
#
_atom_sites.entry_id                     6GQX 
_atom_sites.fract_transf_matrix[1][1]    0.015826 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008472 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006395 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 3 MG A 1 201 202 MG MG . 
H 4 GNP A 1 202 201 GNP GNP . 
I 5 F8K A 1 203 203 F8K Ch2 . 
J 3 MG B 1 201 202 MG MG . 
K 4 GNP B 1 202 201 GNP GNP . 
L 5 F8K B 1 203 203 F8K Ch2 . 
M 3 MG C 1 201 202 MG MG . 
N 4 GNP C 1 202 201 GNP GNP . 
O 5 F8K C 1 203 203 F8K Ch2 . 
P 4 GNP D 1 201 201 GNP GNP . 
Q 4 GNP E 1 201 201 GNP GNP . 
R 4 GNP F 1 201 201 GNP GNP . 
S 6 HOH A 1 301 87 HOH HOH . 
S 6 HOH A 2 302 38 HOH HOH . 
S 6 HOH A 3 303 79 HOH HOH . 
S 6 HOH A 4 304 62 HOH HOH . 
S 6 HOH A 5 305 29 HOH HOH . 
S 6 HOH A 6 306 9 HOH HOH . 
S 6 HOH A 7 307 92 HOH HOH . 
S 6 HOH A 8 308 5 HOH HOH . 
S 6 HOH A 9 309 18 HOH HOH . 
S 6 HOH A 10 310 15 HOH HOH . 
S 6 HOH A 11 311 44 HOH HOH . 
S 6 HOH A 12 312 12 HOH HOH . 
S 6 HOH A 13 313 39 HOH HOH . 
S 6 HOH A 14 314 8 HOH HOH . 
S 6 HOH A 15 315 91 HOH HOH . 
S 6 HOH A 16 316 10 HOH HOH . 
S 6 HOH A 17 317 56 HOH HOH . 
S 6 HOH A 18 318 20 HOH HOH . 
S 6 HOH A 19 319 51 HOH HOH . 
S 6 HOH A 20 320 23 HOH HOH . 
S 6 HOH A 21 321 63 HOH HOH . 
S 6 HOH A 22 322 58 HOH HOH . 
S 6 HOH A 23 323 50 HOH HOH . 
S 6 HOH A 24 324 41 HOH HOH . 
S 6 HOH A 25 325 86 HOH HOH . 
S 6 HOH A 26 326 83 HOH HOH . 
S 6 HOH A 27 327 90 HOH HOH . 
S 6 HOH A 28 328 88 HOH HOH . 
S 6 HOH A 29 329 21 HOH HOH . 
S 6 HOH A 30 330 82 HOH HOH . 
T 6 HOH B 1 301 64 HOH HOH . 
T 6 HOH B 2 302 67 HOH HOH . 
T 6 HOH B 3 303 61 HOH HOH . 
T 6 HOH B 4 304 31 HOH HOH . 
T 6 HOH B 5 305 94 HOH HOH . 
T 6 HOH B 6 306 59 HOH HOH . 
T 6 HOH B 7 307 60 HOH HOH . 
T 6 HOH B 8 308 32 HOH HOH . 
T 6 HOH B 9 309 34 HOH HOH . 
T 6 HOH B 10 310 3 HOH HOH . 
T 6 HOH B 11 311 85 HOH HOH . 
T 6 HOH B 12 312 19 HOH HOH . 
T 6 HOH B 13 313 11 HOH HOH . 
T 6 HOH B 14 314 80 HOH HOH . 
T 6 HOH B 15 315 22 HOH HOH . 
T 6 HOH B 16 316 24 HOH HOH . 
T 6 HOH B 17 317 17 HOH HOH . 
T 6 HOH B 18 318 1 HOH HOH . 
T 6 HOH B 19 319 95 HOH HOH . 
T 6 HOH B 20 320 13 HOH HOH . 
T 6 HOH B 21 321 69 HOH HOH . 
T 6 HOH B 22 322 6 HOH HOH . 
T 6 HOH B 23 323 78 HOH HOH . 
T 6 HOH B 24 324 72 HOH HOH . 
T 6 HOH B 25 325 73 HOH HOH . 
T 6 HOH B 26 326 30 HOH HOH . 
T 6 HOH B 27 327 52 HOH HOH . 
T 6 HOH B 28 328 45 HOH HOH . 
U 6 HOH C 1 301 66 HOH HOH . 
U 6 HOH C 2 302 65 HOH HOH . 
U 6 HOH C 3 303 48 HOH HOH . 
U 6 HOH C 4 304 74 HOH HOH . 
U 6 HOH C 5 305 33 HOH HOH . 
U 6 HOH C 6 306 75 HOH HOH . 
U 6 HOH C 7 307 36 HOH HOH . 
U 6 HOH C 8 308 49 HOH HOH . 
U 6 HOH C 9 309 43 HOH HOH . 
U 6 HOH C 10 310 89 HOH HOH . 
V 6 HOH D 1 301 68 HOH HOH . 
V 6 HOH D 2 302 40 HOH HOH . 
V 6 HOH D 3 303 7 HOH HOH . 
V 6 HOH D 4 304 84 HOH HOH . 
V 6 HOH D 5 305 46 HOH HOH . 
V 6 HOH D 6 306 26 HOH HOH . 
V 6 HOH D 7 307 27 HOH HOH . 
V 6 HOH D 8 308 47 HOH HOH . 
V 6 HOH D 9 309 55 HOH HOH . 
V 6 HOH D 10 310 53 HOH HOH . 
W 6 HOH E 1 301 96 HOH HOH . 
W 6 HOH E 2 302 71 HOH HOH . 
W 6 HOH E 3 303 81 HOH HOH . 
W 6 HOH E 4 304 14 HOH HOH . 
W 6 HOH E 5 305 57 HOH HOH . 
W 6 HOH E 6 306 37 HOH HOH . 
W 6 HOH E 7 307 77 HOH HOH . 
X 6 HOH F 1 301 76 HOH HOH . 
X 6 HOH F 2 302 42 HOH HOH . 
X 6 HOH F 3 303 54 HOH HOH . 
X 6 HOH F 4 304 2 HOH HOH . 
X 6 HOH F 5 305 93 HOH HOH . 
X 6 HOH F 6 306 28 HOH HOH . 
X 6 HOH F 7 307 16 HOH HOH . 
X 6 HOH F 8 308 25 HOH HOH . 
X 6 HOH F 9 309 35 HOH HOH . 
X 6 HOH F 10 310 70 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 F8K . . . L 5 30.559 98.941 26.184 1 42.2 ? C1 F8K 203 B 1 
HETATM 2 C C2 F8K . . . L 5 29.379 99.435 25.669 1 40.41 ? C2 F8K 203 B 1 
HETATM 3 C C3 F8K . . . L 5 28.247 98.624 25.599 1 45.08 ? C3 F8K 203 B 1 
HETATM 4 C C4 F8K . . . L 5 28.319 97.296 26.042 1 45.47 ? C4 F8K 203 B 1 
HETATM 5 C C5 F8K . . . L 5 29.509 96.801 26.561 1 46.18 ? C5 F8K 203 B 1 
HETATM 6 C C6 F8K . . . L 5 30.64 97.624 26.652 1 51.93 ? C6 F8K 203 B 1 
HETATM 7 C C7 F8K . . . L 5 31.889 97.1 27.285 1 55.79 ? C7 F8K 203 B 1 
HETATM 8 C C8 F8K . . . L 5 33.128 97.164 26.635 1 59.09 ? C8 F8K 203 B 1 
HETATM 9 C C9 F8K . . . L 5 34.281 96.648 27.212 1 64.09 ? C9 F8K 203 B 1 
HETATM 10 C C10 F8K . . . L 5 34.218 96.022 28.459 1 66.21 ? C10 F8K 203 B 1 
HETATM 11 C C11 F8K . . . L 5 32.958 95.957 29.126 1 67.5 ? C11 F8K 203 B 1 
HETATM 12 C C12 F8K . . . L 5 31.826 96.496 28.542 1 58.74 ? C12 F8K 203 B 1 
HETATM 13 O O13 F8K . . . L 5 27.122 96.624 25.862 1 48.68 ? O13 F8K 203 B 1 
HETATM 14 C C14 F8K . . . L 5 26.977 95.248 26.29 1 42.85 ? C14 F8K 203 B 1 
HETATM 15 O O15 F8K . . . L 5 32.971 95.298 30.325 1 79.89 ? O15 F8K 203 B 1 
HETATM 16 C C16 F8K . . . L 5 32.338 95.927 31.444 1 76.06 ? C16 F8K 203 B 1 
HETATM 17 N N17 F8K . . . L 5 35.327 95.389 29.089 1 62.39 ? N17 F8K 203 B 1 
HETATM 18 C C18 F8K . . . L 5 36.684 95.197 28.73 1 64.27 ? C18 F8K 203 B 1 
HETATM 19 C C19 F8K . . . L 5 37.585 95.232 29.788 1 67.66 ? C19 F8K 203 B 1 
HETATM 20 C C20 F8K . . . L 5 38.935 95.025 29.564 1 73.01 ? C20 F8K 203 B 1 
HETATM 21 C C21 F8K . . . L 5 39.417 94.748 28.293 1 68.97 ? C21 F8K 203 B 1 
HETATM 22 C C22 F8K . . . L 5 38.512 94.726 27.238 1 62.66 ? C22 F8K 203 B 1 
HETATM 23 C C23 F8K . . . L 5 37.159 94.941 27.45 1 55.06 ? C23 F8K 203 B 1 
HETATM 24 C C24 F8K . . . L 5 40.86 94.341 28.092 1 80.44 ? C24 F8K 203 B 1 
HETATM 25 N N25 F8K . . . L 5 41.092 92.894 28.298 1 88.81 ? N25 F8K 203 B 1 
HETATM 26 C C26 F8K . . . L 5 42.412 92.637 28.895 1 84 ? C26 F8K 203 B 1 
HETATM 27 C C27 F8K . . . L 5 40.931 92.136 27.048 1 88.1 ? C27 F8K 203 B 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           336 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           27 
#