data_6GRY # _model_server_result.job_id BCfw03keSSj4FvEv4LeQDg _model_server_result.datetime_utc '2024-11-24 02:47:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6gry # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"V","auth_seq_id":521}' # _entry.id 6GRY # _exptl.entry_id 6GRY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6GRY _cell.length_a 54.579 _cell.length_b 54.579 _cell.length_c 284.112 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6GRY _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall 'P 4nw 2abw' _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 Q N N ? 4 R N N ? 4 S N N ? 4 T N N ? 4 U N N ? 4 V N N # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 233 n n C1 C2 PEG sing 234 n n C1 H11 PEG sing 235 n n C1 H12 PEG sing 236 n n O1 HO1 PEG sing 237 n n C2 O2 PEG sing 238 n n C2 H21 PEG sing 239 n n C2 H22 PEG sing 240 n n O2 C3 PEG sing 241 n n C3 C4 PEG sing 242 n n C3 H31 PEG sing 243 n n C3 H32 PEG sing 244 n n C4 O4 PEG sing 245 n n C4 H41 PEG sing 246 n n C4 H42 PEG sing 247 n n O4 HO4 PEG sing 248 n n # _atom_sites.entry_id 6GRY _atom_sites.fract_transf_matrix[1][1] 0.018322 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018322 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00352 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PG4 A 1 501 1 PG4 PG4 . C 2 PG4 A 1 502 2 PG4 PG4 . D 3 EDO A 1 503 1 EDO EDO . E 3 EDO A 1 504 2 EDO EDO . F 3 EDO A 1 505 4 EDO EDO . G 3 EDO A 1 506 5 EDO EDO . H 3 EDO A 1 507 8 EDO EDO . I 3 EDO A 1 508 9 EDO EDO . J 3 EDO A 1 509 10 EDO EDO . K 3 EDO A 1 510 11 EDO EDO . L 3 EDO A 1 511 12 EDO EDO . M 3 EDO A 1 512 13 EDO EDO . N 3 EDO A 1 513 14 EDO EDO . O 3 EDO A 1 514 15 EDO EDO . P 3 EDO A 1 515 16 EDO EDO . Q 4 PEG A 1 516 1 PEG PEG . R 4 PEG A 1 517 2 PEG PEG . S 4 PEG A 1 518 3 PEG PEG . T 4 PEG A 1 519 4 PEG PEG . U 4 PEG A 1 520 5 PEG PEG . V 4 PEG A 1 521 7 PEG PEG . W 5 PGE A 1 522 1 PGE PGE . X 6 HOH A 1 601 71 HOH HOH . X 6 HOH A 2 602 133 HOH HOH . X 6 HOH A 3 603 181 HOH HOH . X 6 HOH A 4 604 89 HOH HOH . X 6 HOH A 5 605 18 HOH HOH . X 6 HOH A 6 606 178 HOH HOH . X 6 HOH A 7 607 119 HOH HOH . X 6 HOH A 8 608 126 HOH HOH . X 6 HOH A 9 609 104 HOH HOH . X 6 HOH A 10 610 188 HOH HOH . X 6 HOH A 11 611 68 HOH HOH . X 6 HOH A 12 612 189 HOH HOH . X 6 HOH A 13 613 98 HOH HOH . X 6 HOH A 14 614 79 HOH HOH . X 6 HOH A 15 615 97 HOH HOH . X 6 HOH A 16 616 101 HOH HOH . X 6 HOH A 17 617 148 HOH HOH . X 6 HOH A 18 618 118 HOH HOH . X 6 HOH A 19 619 7 HOH HOH . X 6 HOH A 20 620 154 HOH HOH . X 6 HOH A 21 621 155 HOH HOH . X 6 HOH A 22 622 108 HOH HOH . X 6 HOH A 23 623 167 HOH HOH . X 6 HOH A 24 624 21 HOH HOH . X 6 HOH A 25 625 28 HOH HOH . X 6 HOH A 26 626 137 HOH HOH . X 6 HOH A 27 627 200 HOH HOH . X 6 HOH A 28 628 103 HOH HOH . X 6 HOH A 29 629 179 HOH HOH . X 6 HOH A 30 630 11 HOH HOH . X 6 HOH A 31 631 146 HOH HOH . X 6 HOH A 32 632 8 HOH HOH . X 6 HOH A 33 633 180 HOH HOH . X 6 HOH A 34 634 202 HOH HOH . X 6 HOH A 35 635 184 HOH HOH . X 6 HOH A 36 636 74 HOH HOH . X 6 HOH A 37 637 33 HOH HOH . X 6 HOH A 38 638 156 HOH HOH . X 6 HOH A 39 639 13 HOH HOH . X 6 HOH A 40 640 194 HOH HOH . X 6 HOH A 41 641 80 HOH HOH . X 6 HOH A 42 642 26 HOH HOH . X 6 HOH A 43 643 25 HOH HOH . X 6 HOH A 44 644 84 HOH HOH . X 6 HOH A 45 645 99 HOH HOH . X 6 HOH A 46 646 115 HOH HOH . X 6 HOH A 47 647 37 HOH HOH . X 6 HOH A 48 648 69 HOH HOH . X 6 HOH A 49 649 209 HOH HOH . X 6 HOH A 50 650 5 HOH HOH . X 6 HOH A 51 651 67 HOH HOH . X 6 HOH A 52 652 59 HOH HOH . X 6 HOH A 53 653 34 HOH HOH . X 6 HOH A 54 654 48 HOH HOH . X 6 HOH A 55 655 4 HOH HOH . X 6 HOH A 56 656 24 HOH HOH . X 6 HOH A 57 657 113 HOH HOH . X 6 HOH A 58 658 206 HOH HOH . X 6 HOH A 59 659 39 HOH HOH . X 6 HOH A 60 660 49 HOH HOH . X 6 HOH A 61 661 35 HOH HOH . X 6 HOH A 62 662 56 HOH HOH . X 6 HOH A 63 663 31 HOH HOH . X 6 HOH A 64 664 75 HOH HOH . X 6 HOH A 65 665 95 HOH HOH . X 6 HOH A 66 666 50 HOH HOH . X 6 HOH A 67 667 38 HOH HOH . X 6 HOH A 68 668 10 HOH HOH . X 6 HOH A 69 669 55 HOH HOH . X 6 HOH A 70 670 16 HOH HOH . X 6 HOH A 71 671 63 HOH HOH . X 6 HOH A 72 672 81 HOH HOH . X 6 HOH A 73 673 15 HOH HOH . X 6 HOH A 74 674 100 HOH HOH . X 6 HOH A 75 675 1 HOH HOH . X 6 HOH A 76 676 132 HOH HOH . X 6 HOH A 77 677 145 HOH HOH . X 6 HOH A 78 678 46 HOH HOH . X 6 HOH A 79 679 9 HOH HOH . X 6 HOH A 80 680 201 HOH HOH . X 6 HOH A 81 681 128 HOH HOH . X 6 HOH A 82 682 130 HOH HOH . X 6 HOH A 83 683 61 HOH HOH . X 6 HOH A 84 684 22 HOH HOH . X 6 HOH A 85 685 134 HOH HOH . X 6 HOH A 86 686 29 HOH HOH . X 6 HOH A 87 687 195 HOH HOH . X 6 HOH A 88 688 45 HOH HOH . X 6 HOH A 89 689 2 HOH HOH . X 6 HOH A 90 690 20 HOH HOH . X 6 HOH A 91 691 27 HOH HOH . X 6 HOH A 92 692 23 HOH HOH . X 6 HOH A 93 693 47 HOH HOH . X 6 HOH A 94 694 141 HOH HOH . X 6 HOH A 95 695 117 HOH HOH . X 6 HOH A 96 696 107 HOH HOH . X 6 HOH A 97 697 43 HOH HOH . X 6 HOH A 98 698 105 HOH HOH . X 6 HOH A 99 699 144 HOH HOH . X 6 HOH A 100 700 191 HOH HOH . X 6 HOH A 101 701 14 HOH HOH . X 6 HOH A 102 702 90 HOH HOH . X 6 HOH A 103 703 73 HOH HOH . X 6 HOH A 104 704 40 HOH HOH . X 6 HOH A 105 705 102 HOH HOH . X 6 HOH A 106 706 122 HOH HOH . X 6 HOH A 107 707 196 HOH HOH . X 6 HOH A 108 708 111 HOH HOH . X 6 HOH A 109 709 57 HOH HOH . X 6 HOH A 110 710 3 HOH HOH . X 6 HOH A 111 711 60 HOH HOH . X 6 HOH A 112 712 53 HOH HOH . X 6 HOH A 113 713 182 HOH HOH . X 6 HOH A 114 714 54 HOH HOH . X 6 HOH A 115 715 36 HOH HOH . X 6 HOH A 116 716 19 HOH HOH . X 6 HOH A 117 717 6 HOH HOH . X 6 HOH A 118 718 121 HOH HOH . X 6 HOH A 119 719 64 HOH HOH . X 6 HOH A 120 720 217 HOH HOH . X 6 HOH A 121 721 82 HOH HOH . X 6 HOH A 122 722 208 HOH HOH . X 6 HOH A 123 723 94 HOH HOH . X 6 HOH A 124 724 72 HOH HOH . X 6 HOH A 125 725 177 HOH HOH . X 6 HOH A 126 726 76 HOH HOH . X 6 HOH A 127 727 87 HOH HOH . X 6 HOH A 128 728 85 HOH HOH . X 6 HOH A 129 729 96 HOH HOH . X 6 HOH A 130 730 41 HOH HOH . X 6 HOH A 131 731 142 HOH HOH . X 6 HOH A 132 732 17 HOH HOH . X 6 HOH A 133 733 65 HOH HOH . X 6 HOH A 134 734 91 HOH HOH . X 6 HOH A 135 735 92 HOH HOH . X 6 HOH A 136 736 158 HOH HOH . X 6 HOH A 137 737 109 HOH HOH . X 6 HOH A 138 738 138 HOH HOH . X 6 HOH A 139 739 150 HOH HOH . X 6 HOH A 140 740 159 HOH HOH . X 6 HOH A 141 741 66 HOH HOH . X 6 HOH A 142 742 51 HOH HOH . X 6 HOH A 143 743 211 HOH HOH . X 6 HOH A 144 744 183 HOH HOH . X 6 HOH A 145 745 165 HOH HOH . X 6 HOH A 146 746 136 HOH HOH . X 6 HOH A 147 747 143 HOH HOH . X 6 HOH A 148 748 12 HOH HOH . X 6 HOH A 149 749 169 HOH HOH . X 6 HOH A 150 750 131 HOH HOH . X 6 HOH A 151 751 186 HOH HOH . X 6 HOH A 152 752 83 HOH HOH . X 6 HOH A 153 753 151 HOH HOH . X 6 HOH A 154 754 106 HOH HOH . X 6 HOH A 155 755 147 HOH HOH . X 6 HOH A 156 756 203 HOH HOH . X 6 HOH A 157 757 88 HOH HOH . X 6 HOH A 158 758 219 HOH HOH . X 6 HOH A 159 759 163 HOH HOH . X 6 HOH A 160 760 170 HOH HOH . X 6 HOH A 161 761 120 HOH HOH . X 6 HOH A 162 762 123 HOH HOH . X 6 HOH A 163 763 215 HOH HOH . X 6 HOH A 164 764 212 HOH HOH . X 6 HOH A 165 765 205 HOH HOH . X 6 HOH A 166 766 32 HOH HOH . X 6 HOH A 167 767 77 HOH HOH . X 6 HOH A 168 768 135 HOH HOH . X 6 HOH A 169 769 152 HOH HOH . X 6 HOH A 170 770 187 HOH HOH . X 6 HOH A 171 771 222 HOH HOH . X 6 HOH A 172 772 116 HOH HOH . X 6 HOH A 173 773 210 HOH HOH . X 6 HOH A 174 774 164 HOH HOH . X 6 HOH A 175 775 172 HOH HOH . X 6 HOH A 176 776 125 HOH HOH . X 6 HOH A 177 777 157 HOH HOH . X 6 HOH A 178 778 220 HOH HOH . X 6 HOH A 179 779 62 HOH HOH . X 6 HOH A 180 780 168 HOH HOH . X 6 HOH A 181 781 174 HOH HOH . X 6 HOH A 182 782 192 HOH HOH . X 6 HOH A 183 783 185 HOH HOH . X 6 HOH A 184 784 112 HOH HOH . X 6 HOH A 185 785 176 HOH HOH . X 6 HOH A 186 786 110 HOH HOH . X 6 HOH A 187 787 149 HOH HOH . X 6 HOH A 188 788 30 HOH HOH . X 6 HOH A 189 789 218 HOH HOH . X 6 HOH A 190 790 190 HOH HOH . X 6 HOH A 191 791 114 HOH HOH . X 6 HOH A 192 792 44 HOH HOH . X 6 HOH A 193 793 153 HOH HOH . X 6 HOH A 194 794 166 HOH HOH . X 6 HOH A 195 795 58 HOH HOH . X 6 HOH A 196 796 161 HOH HOH . X 6 HOH A 197 797 204 HOH HOH . X 6 HOH A 198 798 221 HOH HOH . X 6 HOH A 199 799 173 HOH HOH . X 6 HOH A 200 800 139 HOH HOH . X 6 HOH A 201 801 193 HOH HOH . X 6 HOH A 202 802 78 HOH HOH . X 6 HOH A 203 803 175 HOH HOH . X 6 HOH A 204 804 124 HOH HOH . X 6 HOH A 205 805 70 HOH HOH . X 6 HOH A 206 806 129 HOH HOH . X 6 HOH A 207 807 198 HOH HOH . X 6 HOH A 208 808 127 HOH HOH . X 6 HOH A 209 809 214 HOH HOH . X 6 HOH A 210 810 197 HOH HOH . X 6 HOH A 211 811 140 HOH HOH . X 6 HOH A 212 812 86 HOH HOH . X 6 HOH A 213 813 52 HOH HOH . X 6 HOH A 214 814 93 HOH HOH . X 6 HOH A 215 815 199 HOH HOH . X 6 HOH A 216 816 162 HOH HOH . X 6 HOH A 217 817 171 HOH HOH . X 6 HOH A 218 818 42 HOH HOH . X 6 HOH A 219 819 216 HOH HOH . X 6 HOH A 220 820 160 HOH HOH . X 6 HOH A 221 821 207 HOH HOH . X 6 HOH A 222 822 213 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . V 4 -21.233 32.312 113.431 1 81.93 ? C1 PEG 521 A 1 HETATM 2 O O1 PEG . . . V 4 -20.122 33.159 113.314 1 60.25 ? O1 PEG 521 A 1 HETATM 3 C C2 PEG . . . V 4 -21.903 32.119 112.067 1 84.69 ? C2 PEG 521 A 1 HETATM 4 O O2 PEG . . . V 4 -23 31.243 112.173 1 71.6 ? O2 PEG 521 A 1 HETATM 5 C C3 PEG . . . V 4 -24.224 31.816 112.58 1 80.28 ? C3 PEG 521 A 1 HETATM 6 C C4 PEG . . . V 4 -24.527 31.573 114.075 1 76.1 ? C4 PEG 521 A 1 HETATM 7 O O4 PEG . . . V 4 -24.871 30.235 114.383 1 63.4 ? O4 PEG 521 A 1 HETATM 8 H H11 PEG . . . V 4 -21.871 32.703 114.049 1 98.35 ? H11 PEG 521 A 1 HETATM 9 H H12 PEG . . . V 4 -20.944 31.45 113.771 1 98.35 ? H12 PEG 521 A 1 HETATM 10 H HO1 PEG . . . V 4 -20.299 33.785 112.767 1 72.34 ? HO1 PEG 521 A 1 HETATM 11 H H21 PEG . . . V 4 -22.211 32.978 111.738 1 101.67 ? H21 PEG 521 A 1 HETATM 12 H H22 PEG . . . V 4 -21.258 31.75 111.444 1 101.67 ? H22 PEG 521 A 1 HETATM 13 H H31 PEG . . . V 4 -24.94 31.433 112.05 1 96.37 ? H31 PEG 521 A 1 HETATM 14 H H32 PEG . . . V 4 -24.191 32.772 112.419 1 96.37 ? H32 PEG 521 A 1 HETATM 15 H H41 PEG . . . V 4 -25.262 32.149 114.338 1 91.35 ? H41 PEG 521 A 1 HETATM 16 H H42 PEG . . . V 4 -23.743 31.817 114.592 1 91.35 ? H42 PEG 521 A 1 HETATM 17 H HO4 PEG . . . V 4 -25.068 30.176 115.208 1 76.12 ? HO4 PEG 521 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 17 #