data_6GS4 # _model_server_result.job_id 1weoiHxEqvo99GA21anp6w _model_server_result.datetime_utc '2024-11-04 22:44:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6gs4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":602}' # _entry.id 6GS4 # _exptl.entry_id 6GS4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 510.615 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECYL-BETA-D-MALTOSIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6GS4 _cell.length_a 54.94 _cell.length_b 120.19 _cell.length_c 163.67 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6GS4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 22 _struct_conn.ptnr1_auth_asym_id H _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 22 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 96 _struct_conn.ptnr2_auth_asym_id H _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 96 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.034 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C24 H46 O11' _chem_comp.formula_weight 510.615 _chem_comp.id LMT _chem_comp.mon_nstd_flag . _chem_comp.name DODECYL-BETA-D-MALTOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1B C2B LMT sing 242 n n C1B O1B LMT sing 243 n n C1B O5B LMT sing 244 n n C1B H1B LMT sing 245 n n C2B C3B LMT sing 246 n n C2B O2B LMT sing 247 n n C2B H2B LMT sing 248 n n C3B C4B LMT sing 249 n n C3B O3B LMT sing 250 n n C3B H3B LMT sing 251 n n C4B C5B LMT sing 252 n n C4B O4' LMT sing 253 n n C4B H4B LMT sing 254 n n C5B C6B LMT sing 255 n n C5B O5B LMT sing 256 n n C5B H5B LMT sing 257 n n C6B O6B LMT sing 258 n n C6B "H6'2" LMT sing 259 n n C6B "H6'1" LMT sing 260 n n O1B C4' LMT sing 261 n n O2B H2O1 LMT sing 262 n n O3B H3O1 LMT sing 263 n n O4' H4O1 LMT sing 264 n n O6B H6B LMT sing 265 n n C1' C2' LMT sing 266 n n C1' O1' LMT sing 267 n n C1' O5' LMT sing 268 n n C1' H1' LMT sing 269 n n C2' C3' LMT sing 270 n n C2' O2' LMT sing 271 n n C2' H2' LMT sing 272 n n C3' C4' LMT sing 273 n n C3' O3' LMT sing 274 n n C3' H3' LMT sing 275 n n C4' C5' LMT sing 276 n n C4' H4' LMT sing 277 n n C5' C6' LMT sing 278 n n C5' O5' LMT sing 279 n n C5' H5' LMT sing 280 n n C6' O6' LMT sing 281 n n C6' H6D LMT sing 282 n n C6' H6E LMT sing 283 n n O1' C1 LMT sing 284 n n O2' H2O2 LMT sing 285 n n O3' H3O2 LMT sing 286 n n O6' H6' LMT sing 287 n n C1 C2 LMT sing 288 n n C1 H12 LMT sing 289 n n C1 H11 LMT sing 290 n n C2 C3 LMT sing 291 n n C2 H22 LMT sing 292 n n C2 H21 LMT sing 293 n n C3 C4 LMT sing 294 n n C3 H32 LMT sing 295 n n C3 H31 LMT sing 296 n n C4 C5 LMT sing 297 n n C4 H42 LMT sing 298 n n C4 H41 LMT sing 299 n n C5 C6 LMT sing 300 n n C5 H52 LMT sing 301 n n C5 H51 LMT sing 302 n n C6 C7 LMT sing 303 n n C6 H62 LMT sing 304 n n C6 H61 LMT sing 305 n n C7 C8 LMT sing 306 n n C7 H72 LMT sing 307 n n C7 H71 LMT sing 308 n n C8 C9 LMT sing 309 n n C8 H82 LMT sing 310 n n C8 H81 LMT sing 311 n n C9 C10 LMT sing 312 n n C9 H92 LMT sing 313 n n C9 H91 LMT sing 314 n n C10 C11 LMT sing 315 n n C10 H102 LMT sing 316 n n C10 H101 LMT sing 317 n n C11 C12 LMT sing 318 n n C11 H112 LMT sing 319 n n C11 H111 LMT sing 320 n n C12 H123 LMT sing 321 n n C12 H122 LMT sing 322 n n C12 H121 LMT sing 323 n n # _atom_sites.entry_id 6GS4 _atom_sites.fract_transf_matrix[1][1] 0.018202 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00832 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00611 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 F9E A 1 601 1 F9E LIG . D 4 LMT A 1 602 2 LMT LMT . E 5 HOH A 1 701 4 HOH HOH . E 5 HOH A 2 702 2 HOH HOH . E 5 HOH A 3 703 3 HOH HOH . E 5 HOH A 4 704 1 HOH HOH . F 5 HOH H 1 201 5 HOH HOH . F 5 HOH H 2 202 7 HOH HOH . F 5 HOH H 3 203 6 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1B LMT . . . D 4 -35.38 11.918 32.317 1 159.14 ? C1B LMT 602 A 1 HETATM 2 C C2B LMT . . . D 4 -36.105 12.694 33.499 1 159.25 ? C2B LMT 602 A 1 HETATM 3 C C3B LMT . . . D 4 -36.195 14.195 33.155 1 158.22 ? C3B LMT 602 A 1 HETATM 4 C C4B LMT . . . D 4 -36.418 14.382 31.621 1 159.36 ? C4B LMT 602 A 1 HETATM 5 C C5B LMT . . . D 4 -36.995 13.096 30.971 1 158.81 ? C5B LMT 602 A 1 HETATM 6 C C6B LMT . . . D 4 -37.379 13.363 29.519 1 154 ? C6B LMT 602 A 1 HETATM 7 O O1B LMT . . . D 4 -35.121 10.501 32.526 1 153.75 ? O1B LMT 602 A 1 HETATM 8 O O2B LMT . . . D 4 -37.422 12.285 33.778 1 159.92 ? O2B LMT 602 A 1 HETATM 9 O O3B LMT . . . D 4 -34.967 14.811 33.405 1 156.38 ? O3B LMT 602 A 1 HETATM 10 O O4' LMT . . . D 4 -37.421 15.342 31.469 1 159.59 ? O4' LMT 602 A 1 HETATM 11 O O5B LMT . . . D 4 -36.022 12.06 31.045 1 161.34 ? O5B LMT 602 A 1 HETATM 12 O O6B LMT . . . D 4 -37.57 12.116 28.917 1 150.83 ? O6B LMT 602 A 1 HETATM 13 C C1' LMT . . . D 4 -37.229 7.208 33.145 1 143.84 ? C1' LMT 602 A 1 HETATM 14 C C2' LMT . . . D 4 -38.179 8.334 32.844 1 145.49 ? C2' LMT 602 A 1 HETATM 15 C C3' LMT . . . D 4 -37.297 9.452 32.286 1 144.52 ? C3' LMT 602 A 1 HETATM 16 C C4' LMT . . . D 4 -36.095 9.764 33.265 1 148.4 ? C4' LMT 602 A 1 HETATM 17 C C5' LMT . . . D 4 -35.439 8.427 33.7 1 148.48 ? C5' LMT 602 A 1 HETATM 18 C C6' LMT . . . D 4 -34.391 8.691 34.778 1 146.12 ? C6' LMT 602 A 1 HETATM 19 O O1' LMT . . . D 4 -37.986 6.125 33.595 1 134.55 ? O1' LMT 602 A 1 HETATM 20 O O2' LMT . . . D 4 -39.007 7.989 31.774 1 148.01 ? O2' LMT 602 A 1 HETATM 21 O O3' LMT . . . D 4 -38.129 10.567 32.265 1 141.72 ? O3' LMT 602 A 1 HETATM 22 O O5' LMT . . . D 4 -36.469 7.636 34.235 1 150.34 ? O5' LMT 602 A 1 HETATM 23 O O6' LMT . . . D 4 -35.077 9.282 35.846 1 146.37 ? O6' LMT 602 A 1 HETATM 24 C C1 LMT . . . D 4 -37.161 4.982 33.61 1 125.57 ? C1 LMT 602 A 1 HETATM 25 C C2 LMT . . . D 4 -36.78 4.638 32.177 1 119.4 ? C2 LMT 602 A 1 HETATM 26 C C3 LMT . . . D 4 -37.913 3.788 31.614 1 117.14 ? C3 LMT 602 A 1 HETATM 27 C C4 LMT . . . D 4 -38.209 2.638 32.565 1 116.25 ? C4 LMT 602 A 1 HETATM 28 C C5 LMT . . . D 4 -38.34 1.347 31.787 1 115.76 ? C5 LMT 602 A 1 HETATM 29 C C6 LMT . . . D 4 -37.036 0.572 31.822 1 117.04 ? C6 LMT 602 A 1 HETATM 30 C C7 LMT . . . D 4 -37.259 -0.681 32.65 1 116.96 ? C7 LMT 602 A 1 HETATM 31 C C8 LMT . . . D 4 -36.577 -1.864 31.991 1 115.15 ? C8 LMT 602 A 1 HETATM 32 C C9 LMT . . . D 4 -37.277 -3.151 32.388 1 113.95 ? C9 LMT 602 A 1 HETATM 33 C C10 LMT . . . D 4 -36.675 -3.725 33.658 1 112.83 ? C10 LMT 602 A 1 HETATM 34 C C11 LMT . . . D 4 -36.307 -5.187 33.447 1 109.89 ? C11 LMT 602 A 1 HETATM 35 C C12 LMT . . . D 4 -36.426 -5.956 34.747 1 106.6 ? C12 LMT 602 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 254 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 35 #