data_6GSP
#
_model_server_result.job_id            zTMKXi6_My6C9QCsTmrMgA 
_model_server_result.datetime_utc      '2024-11-22 18:56:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6gsp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":105}' 
#
_entry.id    6GSP 
#
_exptl.entry_id    6GSP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              363.221 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "GUANOSINE-3'-MONOPHOSPHATE" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6GSP 
_cell.length_a            48.35 
_cell.length_b            51.11 
_cell.length_c            40.54 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6GSP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 2 A CYS 2 1_555 A SG CYS 10 A CYS 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf2 A SG CYS 6 A CYS 6 1_555 A SG CYS 103 A CYS 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
metalc ? metalc1 A OD1 ASP 15 A ASP 15 1_555 B CA CA . A CA 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.582 ? 
metalc ? metalc2 A OD2 ASP 15 A ASP 15 1_555 B CA CA . A CA 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? 
metalc ? metalc3 B CA CA . A CA 107 1_555 D O HOH . A HOH 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? 
metalc ? metalc4 B CA CA . A CA 107 1_555 D O HOH . A HOH 141 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.281 ? 
metalc ? metalc5 B CA CA . A CA 107 1_555 D O HOH . A HOH 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.237 ? 
#
_chem_comp.formula           'C10 H14 N5 O8 P' 
_chem_comp.formula_weight    363.221 
_chem_comp.id                3GP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "GUANOSINE-3'-MONOPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1P 3GP doub 1 n n 
P O2P 3GP sing 2 n n 
P O3P 3GP sing 3 n n 
P O3' 3GP sing 4 n n 
O2P HOP2 3GP sing 5 n n 
O3P HOP3 3GP sing 6 n n 
O5' C5' 3GP sing 7 n n 
O5' HO5' 3GP sing 8 n n 
C5' C4' 3GP sing 9 n n 
C5' "H5'1" 3GP sing 10 n n 
C5' "H5'2" 3GP sing 11 n n 
C4' O4' 3GP sing 12 n n 
C4' C3' 3GP sing 13 n n 
C4' H4' 3GP sing 14 n n 
O4' C1' 3GP sing 15 n n 
C3' O3' 3GP sing 16 n n 
C3' C2' 3GP sing 17 n n 
C3' H3' 3GP sing 18 n n 
C2' O2' 3GP sing 19 n n 
C2' C1' 3GP sing 20 n n 
C2' H2' 3GP sing 21 n n 
O2' HO2' 3GP sing 22 n n 
C1' N9 3GP sing 23 n n 
C1' H1' 3GP sing 24 n n 
N9 C8 3GP sing 25 n y 
N9 C4 3GP sing 26 n y 
C8 N7 3GP doub 27 n y 
C8 H8 3GP sing 28 n n 
N7 C5 3GP sing 29 n y 
C5 C6 3GP sing 30 n n 
C5 C4 3GP doub 31 n y 
C6 O6 3GP doub 32 n n 
C6 N1 3GP sing 33 n n 
N1 C2 3GP sing 34 n n 
N1 HN1 3GP sing 35 n n 
C2 N2 3GP sing 36 n n 
C2 N3 3GP doub 37 n n 
N2 HN21 3GP sing 38 n n 
N2 HN22 3GP sing 39 n n 
N3 C4 3GP sing 40 n n 
#
_atom_sites.entry_id                     6GSP 
_atom_sites.fract_transf_matrix[1][1]    0.020683 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019566 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.024667 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CA A 1 107 107 CA CA . 
C 3 3GP A 1 105 105 3GP 3GP . 
D 4 HOH A 1 108 107 HOH HOH . 
D 4 HOH A 2 109 108 HOH HOH . 
D 4 HOH A 3 110 109 HOH HOH . 
D 4 HOH A 4 111 110 HOH HOH . 
D 4 HOH A 5 112 111 HOH HOH . 
D 4 HOH A 6 113 112 HOH HOH . 
D 4 HOH A 7 114 113 HOH HOH . 
D 4 HOH A 8 115 114 HOH HOH . 
D 4 HOH A 9 116 115 HOH HOH . 
D 4 HOH A 10 117 116 HOH HOH . 
D 4 HOH A 11 118 117 HOH HOH . 
D 4 HOH A 12 119 118 HOH HOH . 
D 4 HOH A 13 120 119 HOH HOH . 
D 4 HOH A 14 121 120 HOH HOH . 
D 4 HOH A 15 122 121 HOH HOH . 
D 4 HOH A 16 123 122 HOH HOH . 
D 4 HOH A 17 124 123 HOH HOH . 
D 4 HOH A 18 125 124 HOH HOH . 
D 4 HOH A 19 126 125 HOH HOH . 
D 4 HOH A 20 127 126 HOH HOH . 
D 4 HOH A 21 128 127 HOH HOH . 
D 4 HOH A 22 129 128 HOH HOH . 
D 4 HOH A 23 130 129 HOH HOH . 
D 4 HOH A 24 131 130 HOH HOH . 
D 4 HOH A 25 132 131 HOH HOH . 
D 4 HOH A 26 133 132 HOH HOH . 
D 4 HOH A 27 134 133 HOH HOH . 
D 4 HOH A 28 135 134 HOH HOH . 
D 4 HOH A 29 136 135 HOH HOH . 
D 4 HOH A 30 137 136 HOH HOH . 
D 4 HOH A 31 138 137 HOH HOH . 
D 4 HOH A 32 139 138 HOH HOH . 
D 4 HOH A 33 140 139 HOH HOH . 
D 4 HOH A 34 141 140 HOH HOH . 
D 4 HOH A 35 142 141 HOH HOH . 
D 4 HOH A 36 143 142 HOH HOH . 
D 4 HOH A 37 144 143 HOH HOH . 
D 4 HOH A 38 145 144 HOH HOH . 
D 4 HOH A 39 146 145 HOH HOH . 
D 4 HOH A 40 147 146 HOH HOH . 
D 4 HOH A 41 148 147 HOH HOH . 
D 4 HOH A 42 149 148 HOH HOH . 
D 4 HOH A 43 150 149 HOH HOH . 
D 4 HOH A 44 151 150 HOH HOH . 
D 4 HOH A 45 152 151 HOH HOH . 
D 4 HOH A 46 153 152 HOH HOH . 
D 4 HOH A 47 154 153 HOH HOH . 
D 4 HOH A 48 155 154 HOH HOH . 
D 4 HOH A 49 156 155 HOH HOH . 
D 4 HOH A 50 157 156 HOH HOH . 
D 4 HOH A 51 158 157 HOH HOH . 
D 4 HOH A 52 159 158 HOH HOH . 
D 4 HOH A 53 160 159 HOH HOH . 
D 4 HOH A 54 161 160 HOH HOH . 
D 4 HOH A 55 162 161 HOH HOH . 
D 4 HOH A 56 163 162 HOH HOH . 
D 4 HOH A 57 164 163 HOH HOH . 
D 4 HOH A 58 165 164 HOH HOH . 
D 4 HOH A 59 166 165 HOH HOH . 
D 4 HOH A 60 167 166 HOH HOH . 
D 4 HOH A 61 168 167 HOH HOH . 
D 4 HOH A 62 169 168 HOH HOH . 
D 4 HOH A 63 170 169 HOH HOH . 
D 4 HOH A 64 171 170 HOH HOH . 
D 4 HOH A 65 172 171 HOH HOH . 
D 4 HOH A 66 173 172 HOH HOH . 
D 4 HOH A 67 174 173 HOH HOH . 
D 4 HOH A 68 175 174 HOH HOH . 
D 4 HOH A 69 176 175 HOH HOH . 
D 4 HOH A 70 177 176 HOH HOH . 
D 4 HOH A 71 178 177 HOH HOH . 
D 4 HOH A 72 179 178 HOH HOH . 
D 4 HOH A 73 180 179 HOH HOH . 
D 4 HOH A 74 181 180 HOH HOH . 
D 4 HOH A 75 182 181 HOH HOH . 
D 4 HOH A 76 183 182 HOH HOH . 
D 4 HOH A 77 184 183 HOH HOH . 
D 4 HOH A 78 185 184 HOH HOH . 
D 4 HOH A 79 186 185 HOH HOH . 
D 4 HOH A 80 187 186 HOH HOH . 
D 4 HOH A 81 188 187 HOH HOH . 
D 4 HOH A 82 189 188 HOH HOH . 
D 4 HOH A 83 190 189 HOH HOH . 
D 4 HOH A 84 191 190 HOH HOH . 
D 4 HOH A 85 192 191 HOH HOH . 
D 4 HOH A 86 193 192 HOH HOH . 
D 4 HOH A 87 194 193 HOH HOH . 
D 4 HOH A 88 195 194 HOH HOH . 
D 4 HOH A 89 196 195 HOH HOH . 
D 4 HOH A 90 197 196 HOH HOH . 
D 4 HOH A 91 198 197 HOH HOH . 
D 4 HOH A 92 199 198 HOH HOH . 
D 4 HOH A 93 200 199 HOH HOH . 
D 4 HOH A 94 201 200 HOH HOH . 
D 4 HOH A 95 202 201 HOH HOH . 
D 4 HOH A 96 203 202 HOH HOH . 
D 4 HOH A 97 204 203 HOH HOH . 
D 4 HOH A 98 205 204 HOH HOH . 
D 4 HOH A 99 206 205 HOH HOH . 
D 4 HOH A 100 207 206 HOH HOH . 
D 4 HOH A 101 208 207 HOH HOH . 
D 4 HOH A 102 209 208 HOH HOH . 
D 4 HOH A 103 210 209 HOH HOH . 
D 4 HOH A 104 211 210 HOH HOH . 
D 4 HOH A 105 212 211 HOH HOH . 
D 4 HOH A 106 213 212 HOH HOH . 
D 4 HOH A 107 214 213 HOH HOH . 
D 4 HOH A 108 215 214 HOH HOH . 
D 4 HOH A 109 216 215 HOH HOH . 
D 4 HOH A 110 217 216 HOH HOH . 
D 4 HOH A 111 218 217 HOH HOH . 
D 4 HOH A 112 219 218 HOH HOH . 
D 4 HOH A 113 220 219 HOH HOH . 
D 4 HOH A 114 221 220 HOH HOH . 
D 4 HOH A 115 222 221 HOH HOH . 
D 4 HOH A 116 223 222 HOH HOH . 
D 4 HOH A 117 224 223 HOH HOH . 
D 4 HOH A 118 225 224 HOH HOH . 
D 4 HOH A 119 226 225 HOH HOH . 
D 4 HOH A 120 227 226 HOH HOH . 
D 4 HOH A 121 228 227 HOH HOH . 
D 4 HOH A 122 229 228 HOH HOH . 
D 4 HOH A 123 230 229 HOH HOH . 
D 4 HOH A 124 231 230 HOH HOH . 
D 4 HOH A 125 232 231 HOH HOH . 
D 4 HOH A 126 233 232 HOH HOH . 
D 4 HOH A 127 234 233 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P 3GP . . . C 3 21.03 37.954 19.466 1 46.48 ? P 3GP 105 A 1 
HETATM 2 O O1P 3GP . . . C 3 22.161 37.766 18.529 1 45.82 ? O1P 3GP 105 A 1 
HETATM 3 O O2P 3GP . . . C 3 21.223 39.189 20.245 1 45.51 ? O2P 3GP 105 A 1 
HETATM 4 O O3P 3GP . . . C 3 19.691 37.936 18.825 1 46.12 ? O3P 3GP 105 A 1 
HETATM 5 O O5' 3GP . . . C 3 20.056 37.261 23.155 1 40.82 ? O5' 3GP 105 A 1 
HETATM 6 C C5' 3GP . . . C 3 20.094 35.849 23.354 1 39.14 ? C5' 3GP 105 A 1 
HETATM 7 C C4' 3GP . . . C 3 20.626 35.143 22.144 1 39.4 ? C4' 3GP 105 A 1 
HETATM 8 O O4' 3GP . . . C 3 20.174 33.804 22.119 1 37.15 ? O4' 3GP 105 A 1 
HETATM 9 C C3' 3GP . . . C 3 20.08 35.819 20.93 1 41.4 ? C3' 3GP 105 A 1 
HETATM 10 O O3' 3GP . . . C 3 21.134 36.528 20.3 1 40.78 ? O3' 3GP 105 A 1 
HETATM 11 C C2' 3GP . . . C 3 19.599 34.743 20.068 1 39.6 ? C2' 3GP 105 A 1 
HETATM 12 O O2' 3GP . . . C 3 20.469 34.534 18.993 1 40.74 ? O2' 3GP 105 A 1 
HETATM 13 C C1' 3GP . . . C 3 19.563 33.501 20.877 1 37.53 ? C1' 3GP 105 A 1 
HETATM 14 N N9 3GP . . . C 3 18.135 33.109 20.91 1 32.95 ? N9 3GP 105 A 1 
HETATM 15 C C8 3GP . . . C 3 17.556 31.996 20.34 1 30.62 ? C8 3GP 105 A 1 
HETATM 16 N N7 3GP . . . C 3 16.273 31.938 20.485 1 27.99 ? N7 3GP 105 A 1 
HETATM 17 C C5 3GP . . . C 3 15.964 33.079 21.197 1 27.89 ? C5 3GP 105 A 1 
HETATM 18 C C6 3GP . . . C 3 14.71 33.539 21.641 1 28.02 ? C6 3GP 105 A 1 
HETATM 19 O O6 3GP . . . C 3 13.654 32.958 21.433 1 26.83 ? O6 3GP 105 A 1 
HETATM 20 N N1 3GP . . . C 3 14.794 34.747 22.337 1 28.49 ? N1 3GP 105 A 1 
HETATM 21 C C2 3GP . . . C 3 15.982 35.437 22.58 1 29.4 ? C2 3GP 105 A 1 
HETATM 22 N N2 3GP . . . C 3 15.887 36.561 23.313 1 29.01 ? N2 3GP 105 A 1 
HETATM 23 N N3 3GP . . . C 3 17.187 34.992 22.145 1 28.68 ? N3 3GP 105 A 1 
HETATM 24 C C4 3GP . . . C 3 17.093 33.815 21.469 1 29.94 ? C4 3GP 105 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           271 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           24 
#