data_6GTR # _model_server_result.job_id uyz8Uq5KLIMNhW2uhmCkCw _model_server_result.datetime_utc '2025-01-26 00:33:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6gtr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":201}' # _entry.id 6GTR # _exptl.entry_id 6GTR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 809.571 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETYL COENZYME *A' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6GTR _cell.length_a 87.88 _cell.length_b 87.88 _cell.length_c 125.61 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6GTR _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,H,J 1 1 B,D,G,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O LEU 105 A LEU 101 1_555 F MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.49 ? metalc ? metalc2 E O4A ACO . A ACO 201 1_555 F MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.985 ? # _chem_comp.formula 'C23 H38 N7 O17 P3 S' _chem_comp.formula_weight 809.571 _chem_comp.id ACO _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETYL COENZYME *A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A ACO sing 1 n y N1A C6A ACO doub 2 n y C2A N3A ACO doub 3 n y C2A H2A ACO sing 4 n n N3A C4A ACO sing 5 n y C4A C5A ACO doub 6 n y C4A N9A ACO sing 7 n y C5A C6A ACO sing 8 n y C5A N7A ACO sing 9 n y C6A N6A ACO sing 10 n n N6A H61A ACO sing 11 n n N6A H62A ACO sing 12 n n N7A C8A ACO doub 13 n y C8A N9A ACO sing 14 n y C8A H8A ACO sing 15 n n N9A C1B ACO sing 16 n n C1B C2B ACO sing 17 n n C1B O4B ACO sing 18 n n C1B H1B ACO sing 19 n n C2B O2B ACO sing 20 n n C2B C3B ACO sing 21 n n C2B H2B ACO sing 22 n n O2B HO2A ACO sing 23 n n C3B O3B ACO sing 24 n n C3B C4B ACO sing 25 n n C3B H3B ACO sing 26 n n O3B P3B ACO sing 27 n n P3B O7A ACO doub 28 n n P3B O8A ACO sing 29 n n P3B O9A ACO sing 30 n n O8A HOA8 ACO sing 31 n n O9A HOA9 ACO sing 32 n n C4B O4B ACO sing 33 n n C4B C5B ACO sing 34 n n C4B H4B ACO sing 35 n n C5B O5B ACO sing 36 n n C5B H51A ACO sing 37 n n C5B H52A ACO sing 38 n n O5B P1A ACO sing 39 n n P1A O1A ACO doub 40 n n P1A O2A ACO sing 41 n n P1A O3A ACO sing 42 n n O2A HOA2 ACO sing 43 n n O3A P2A ACO sing 44 n n P2A O4A ACO doub 45 n n P2A O5A ACO sing 46 n n P2A O6A ACO sing 47 n n O5A HOA5 ACO sing 48 n n O6A CCP ACO sing 49 n n CBP CCP ACO sing 50 n n CBP CDP ACO sing 51 n n CBP CEP ACO sing 52 n n CBP CAP ACO sing 53 n n CCP H121 ACO sing 54 n n CCP H122 ACO sing 55 n n CDP H131 ACO sing 56 n n CDP H132 ACO sing 57 n n CDP H133 ACO sing 58 n n CEP H141 ACO sing 59 n n CEP H142 ACO sing 60 n n CEP H143 ACO sing 61 n n CAP OAP ACO sing 62 n n CAP C9P ACO sing 63 n n CAP H10 ACO sing 64 n n OAP HO1 ACO sing 65 n n C9P O9P ACO doub 66 n n C9P N8P ACO sing 67 n n N8P C7P ACO sing 68 n n N8P HN8 ACO sing 69 n n C7P C6P ACO sing 70 n n C7P H71 ACO sing 71 n n C7P H72 ACO sing 72 n n C6P C5P ACO sing 73 n n C6P H61 ACO sing 74 n n C6P H62 ACO sing 75 n n C5P O5P ACO doub 76 n n C5P N4P ACO sing 77 n n N4P C3P ACO sing 78 n n N4P HN4 ACO sing 79 n n C3P C2P ACO sing 80 n n C3P H31 ACO sing 81 n n C3P H32 ACO sing 82 n n C2P S1P ACO sing 83 n n C2P H21 ACO sing 84 n n C2P H22 ACO sing 85 n n S1P C ACO sing 86 n n C O ACO doub 87 n n C CH3 ACO sing 88 n n CH3 HH31 ACO sing 89 n n CH3 HH32 ACO sing 90 n n CH3 HH33 ACO sing 91 n n # _atom_sites.entry_id 6GTR _atom_sites.fract_transf_matrix[1][1] 0.011379 _atom_sites.fract_transf_matrix[1][2] 0.00657 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01314 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007961 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ACO A 1 201 1 ACO ACO . F 4 MG A 1 202 1 MG MG . G 5 GOL B 1 201 1 GOL GOL . H 6 HOH A 1 301 15 HOH HOH . H 6 HOH A 2 302 14 HOH HOH . H 6 HOH A 3 303 12 HOH HOH . H 6 HOH A 4 304 13 HOH HOH . H 6 HOH A 5 305 4 HOH HOH . H 6 HOH A 6 306 3 HOH HOH . H 6 HOH A 7 307 33 HOH HOH . H 6 HOH A 8 308 28 HOH HOH . H 6 HOH A 9 309 19 HOH HOH . I 6 HOH B 1 301 18 HOH HOH . I 6 HOH B 2 302 24 HOH HOH . I 6 HOH B 3 303 29 HOH HOH . I 6 HOH B 4 304 5 HOH HOH . I 6 HOH B 5 305 30 HOH HOH . I 6 HOH B 6 306 23 HOH HOH . I 6 HOH B 7 307 2 HOH HOH . I 6 HOH B 8 308 26 HOH HOH . I 6 HOH B 9 309 16 HOH HOH . I 6 HOH B 10 310 7 HOH HOH . I 6 HOH B 11 311 1 HOH HOH . I 6 HOH B 12 312 25 HOH HOH . I 6 HOH B 13 313 32 HOH HOH . I 6 HOH B 14 314 31 HOH HOH . I 6 HOH B 15 315 6 HOH HOH . I 6 HOH B 16 316 34 HOH HOH . I 6 HOH B 17 317 8 HOH HOH . I 6 HOH B 18 318 21 HOH HOH . J 6 HOH C 1 101 27 HOH HOH . K 6 HOH D 1 101 10 HOH HOH . K 6 HOH D 2 102 20 HOH HOH . K 6 HOH D 3 103 22 HOH HOH . K 6 HOH D 4 104 9 HOH HOH . K 6 HOH D 5 105 11 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A ACO . . . E 3 -14.289 48.169 -35.542 0.8 116.46 ? N1A ACO 201 A 1 HETATM 2 C C2A ACO . . . E 3 -13.08 47.667 -35.852 0.8 116.75 ? C2A ACO 201 A 1 HETATM 3 N N3A ACO . . . E 3 -12.165 47.303 -34.936 0.8 116.8 ? N3A ACO 201 A 1 HETATM 4 C C4A ACO . . . E 3 -12.42 47.428 -33.611 0.8 116.77 ? C4A ACO 201 A 1 HETATM 5 C C5A ACO . . . E 3 -13.721 47.97 -33.191 0.8 116.39 ? C5A ACO 201 A 1 HETATM 6 C C6A ACO . . . E 3 -14.677 48.348 -34.259 0.5 115.99 ? C6A ACO 201 A 1 HETATM 7 N N6A ACO . . . E 3 -15.897 48.855 -33.961 0.5 115.23 ? N6A ACO 201 A 1 HETATM 8 N N7A ACO . . . E 3 -13.714 47.986 -31.846 0.5 116.42 ? N7A ACO 201 A 1 HETATM 9 C C8A ACO . . . E 3 -12.514 47.498 -31.439 0.5 116.63 ? C8A ACO 201 A 1 HETATM 10 N N9A ACO . . . E 3 -11.744 47.165 -32.491 0.5 117.13 ? N9A ACO 201 A 1 HETATM 11 C C1B ACO . . . E 3 -10.372 46.602 -32.418 0.8 117.95 ? C1B ACO 201 A 1 HETATM 12 C C2B ACO . . . E 3 -9.989 46.359 -30.966 0.8 117.91 ? C2B ACO 201 A 1 HETATM 13 O O2B ACO . . . E 3 -8.96 47.279 -30.573 0.8 117.25 ? O2B ACO 201 A 1 HETATM 14 C C3B ACO . . . E 3 -9.546 44.904 -30.884 0.8 118.04 ? C3B ACO 201 A 1 HETATM 15 O O3B ACO . . . E 3 -8.167 44.767 -30.542 0.8 118.81 ? O3B ACO 201 A 1 HETATM 16 P P3B ACO . . . E 3 -7.563 43.332 -30.133 0.8 118.89 ? P3B ACO 201 A 1 HETATM 17 O O7A ACO . . . E 3 -6.232 43.665 -29.503 0.5 119.63 ? O7A ACO 201 A 1 HETATM 18 O O8A ACO . . . E 3 -8.583 42.768 -29.174 0.5 118.11 -1 O8A ACO 201 A 1 HETATM 19 O O9A ACO . . . E 3 -7.463 42.591 -31.445 0.5 118.74 ? O9A ACO 201 A 1 HETATM 20 C C4B ACO . . . E 3 -9.789 44.312 -32.264 0.8 116.49 ? C4B ACO 201 A 1 HETATM 21 O O4B ACO . . . E 3 -10.325 45.344 -33.097 0.8 117.7 ? O4B ACO 201 A 1 HETATM 22 C C5B ACO . . . E 3 -10.76 43.14 -32.203 0.8 113.28 ? C5B ACO 201 A 1 HETATM 23 O O5B ACO . . . E 3 -11.825 43.45 -31.306 0.8 110.5 ? O5B ACO 201 A 1 HETATM 24 P P1A ACO . . . E 3 -11.88 42.784 -29.841 0.8 107.8 ? P1A ACO 201 A 1 HETATM 25 O O1A ACO . . . E 3 -11.164 43.701 -28.878 0.8 107.91 -1 O1A ACO 201 A 1 HETATM 26 O O2A ACO . . . E 3 -13.305 42.367 -29.566 0.8 106.03 ? O2A ACO 201 A 1 HETATM 27 O O3A ACO . . . E 3 -10.992 41.454 -30.025 0.8 108.5 ? O3A ACO 201 A 1 HETATM 28 P P2A ACO . . . E 3 -11.501 40.253 -30.97 0.8 107.76 ? P2A ACO 201 A 1 HETATM 29 O O4A ACO . . . E 3 -13.01 40.227 -30.929 0.8 106.98 -1 O4A ACO 201 A 1 HETATM 30 O O5A ACO . . . E 3 -10.785 40.357 -32.295 0.8 108.31 ? O5A ACO 201 A 1 HETATM 31 O O6A ACO . . . E 3 -10.954 38.947 -30.203 0.5 104.42 ? O6A ACO 201 A 1 HETATM 32 C CBP ACO . . . E 3 -9.373 37.584 -29.005 0.8 97.73 ? CBP ACO 201 A 1 HETATM 33 C CCP ACO . . . E 3 -9.7 38.977 -29.525 0.8 101.27 ? CCP ACO 201 A 1 HETATM 34 C CDP ACO . . . E 3 -7.884 37.479 -28.706 0.8 97.6 ? CDP ACO 201 A 1 HETATM 35 C CEP ACO . . . E 3 -9.77 36.54 -30.039 0.8 97.17 ? CEP ACO 201 A 1 HETATM 36 C CAP ACO . . . E 3 -10.157 37.336 -27.723 0.8 94.22 ? CAP ACO 201 A 1 HETATM 37 O OAP ACO . . . E 3 -11.549 37.199 -28.033 0.8 92.97 ? OAP ACO 201 A 1 HETATM 38 C C9P ACO . . . E 3 -9.665 36.078 -27.071 0.8 92.09 ? C9P ACO 201 A 1 HETATM 39 O O9P ACO . . . E 3 -8.996 36.13 -26.052 0.8 90.63 ? O9P ACO 201 A 1 HETATM 40 N N8P ACO . . . E 3 -9.997 34.934 -27.662 0.8 91.55 ? N8P ACO 201 A 1 HETATM 41 C C7P ACO . . . E 3 -9.969 33.674 -26.944 0.8 92 ? C7P ACO 201 A 1 HETATM 42 C C6P ACO . . . E 3 -8.818 32.785 -27.398 0.8 92.79 ? C6P ACO 201 A 1 HETATM 43 C C5P ACO . . . E 3 -8.817 32.692 -28.906 0.8 93.47 ? C5P ACO 201 A 1 HETATM 44 O O5P ACO . . . E 3 -9.854 32.826 -29.535 0.8 93.56 ? O5P ACO 201 A 1 HETATM 45 N N4P ACO . . . E 3 -7.643 32.459 -29.485 0.8 94.21 ? N4P ACO 201 A 1 HETATM 46 C C3P ACO . . . E 3 -7.519 32.34 -30.925 0.8 95.26 ? C3P ACO 201 A 1 HETATM 47 C C2P ACO . . . E 3 -6.571 31.217 -31.325 0.8 96.71 ? C2P ACO 201 A 1 HETATM 48 S S1P ACO . . . E 3 -5.519 31.77 -32.626 0.8 97.65 ? S1P ACO 201 A 1 HETATM 49 C C ACO . . . E 3 -4.096 31.965 -31.784 0.8 98.07 ? C ACO 201 A 1 HETATM 50 O O ACO . . . E 3 -3.051 32.066 -32.404 0.8 98.37 ? O ACO 201 A 1 HETATM 51 C CH3 ACO . . . E 3 -4.139 32.01 -30.285 0.8 97.18 ? CH3 ACO 201 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 337 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 51 #