data_6GTU # _model_server_result.job_id 83prYzp6CmW6ptd_-c5RCA _model_server_result.datetime_utc '2025-02-16 20:25:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6gtu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 6GTU # _exptl.entry_id 6GTU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6GTU _cell.length_a 129.51 _cell.length_b 129.51 _cell.length_c 129.51 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6GTU _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 0 0 129.51 4 'crystal symmetry operation' 4_556 x,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 129.51 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 257 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 255 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 257 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 255 _struct_conn.ptnr2_symmetry 4_556 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.059 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 347 n n C1 C2 PGE sing 348 n n C1 H1 PGE sing 349 n n C1 H12 PGE sing 350 n n O1 HO1 PGE sing 351 n n C2 O2 PGE sing 352 n n C2 H2 PGE sing 353 n n C2 H22 PGE sing 354 n n O2 C3 PGE sing 355 n n C3 C4 PGE sing 356 n n C3 H3 PGE sing 357 n n C3 H32 PGE sing 358 n n C4 O3 PGE sing 359 n n C4 H4 PGE sing 360 n n C4 H42 PGE sing 361 n n O4 C6 PGE sing 362 n n O4 HO4 PGE sing 363 n n C6 C5 PGE sing 364 n n C6 H6 PGE sing 365 n n C6 H62 PGE sing 366 n n C5 O3 PGE sing 367 n n C5 H5 PGE sing 368 n n C5 H52 PGE sing 369 n n # _atom_sites.entry_id 6GTU _atom_sites.fract_transf_matrix[1][1] 0.007721 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007721 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007721 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAD A 1 301 301 NAD NAD . C 3 45N A 1 302 1 45N J7J . D 4 PGE A 1 303 1 PGE PGE . E 5 CL A 1 304 1 CL CL . F 6 HOH A 1 401 28 HOH HOH . F 6 HOH A 2 402 523 HOH HOH . F 6 HOH A 3 403 403 HOH HOH . F 6 HOH A 4 404 433 HOH HOH . F 6 HOH A 5 405 407 HOH HOH . F 6 HOH A 6 406 421 HOH HOH . F 6 HOH A 7 407 2 HOH HOH . F 6 HOH A 8 408 489 HOH HOH . F 6 HOH A 9 409 410 HOH HOH . F 6 HOH A 10 410 435 HOH HOH . F 6 HOH A 11 411 420 HOH HOH . F 6 HOH A 12 412 500 HOH HOH . F 6 HOH A 13 413 415 HOH HOH . F 6 HOH A 14 414 6 HOH HOH . F 6 HOH A 15 415 3 HOH HOH . F 6 HOH A 16 416 437 HOH HOH . F 6 HOH A 17 417 427 HOH HOH . F 6 HOH A 18 418 445 HOH HOH . F 6 HOH A 19 419 27 HOH HOH . F 6 HOH A 20 420 22 HOH HOH . F 6 HOH A 21 421 439 HOH HOH . F 6 HOH A 22 422 16 HOH HOH . F 6 HOH A 23 423 408 HOH HOH . F 6 HOH A 24 424 424 HOH HOH . F 6 HOH A 25 425 25 HOH HOH . F 6 HOH A 26 426 507 HOH HOH . F 6 HOH A 27 427 412 HOH HOH . F 6 HOH A 28 428 14 HOH HOH . F 6 HOH A 29 429 430 HOH HOH . F 6 HOH A 30 430 12 HOH HOH . F 6 HOH A 31 431 448 HOH HOH . F 6 HOH A 32 432 454 HOH HOH . F 6 HOH A 33 433 425 HOH HOH . F 6 HOH A 34 434 431 HOH HOH . F 6 HOH A 35 435 423 HOH HOH . F 6 HOH A 36 436 442 HOH HOH . F 6 HOH A 37 437 422 HOH HOH . F 6 HOH A 38 438 440 HOH HOH . F 6 HOH A 39 439 453 HOH HOH . F 6 HOH A 40 440 7 HOH HOH . F 6 HOH A 41 441 29 HOH HOH . F 6 HOH A 42 442 447 HOH HOH . F 6 HOH A 43 443 515 HOH HOH . F 6 HOH A 44 444 438 HOH HOH . F 6 HOH A 45 445 30 HOH HOH . F 6 HOH A 46 446 504 HOH HOH . F 6 HOH A 47 447 452 HOH HOH . F 6 HOH A 48 448 436 HOH HOH . F 6 HOH A 49 449 463 HOH HOH . F 6 HOH A 50 450 449 HOH HOH . F 6 HOH A 51 451 10 HOH HOH . F 6 HOH A 52 452 476 HOH HOH . F 6 HOH A 53 453 475 HOH HOH . F 6 HOH A 54 454 457 HOH HOH . F 6 HOH A 55 455 469 HOH HOH . F 6 HOH A 56 456 521 HOH HOH . F 6 HOH A 57 457 513 HOH HOH . F 6 HOH A 58 458 466 HOH HOH . F 6 HOH A 59 459 24 HOH HOH . F 6 HOH A 60 460 519 HOH HOH . F 6 HOH A 61 461 17 HOH HOH . F 6 HOH A 62 462 462 HOH HOH . F 6 HOH A 63 463 23 HOH HOH . F 6 HOH A 64 464 506 HOH HOH . F 6 HOH A 65 465 491 HOH HOH . F 6 HOH A 66 466 495 HOH HOH . F 6 HOH A 67 467 511 HOH HOH . F 6 HOH A 68 468 477 HOH HOH . F 6 HOH A 69 469 518 HOH HOH . F 6 HOH A 70 470 503 HOH HOH . F 6 HOH A 71 471 486 HOH HOH . F 6 HOH A 72 472 490 HOH HOH . F 6 HOH A 73 473 517 HOH HOH . F 6 HOH A 74 474 499 HOH HOH . F 6 HOH A 75 475 493 HOH HOH . F 6 HOH A 76 476 11 HOH HOH . F 6 HOH A 77 477 524 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . D 4 -31.768 14.611 50.402 1 82.41 ? C1 PGE 303 A 1 HETATM 2 O O1 PGE . . . D 4 -32.55 13.665 51.11 1 87.86 ? O1 PGE 303 A 1 HETATM 3 C C2 PGE . . . D 4 -30.436 14.045 50.038 1 76.44 ? C2 PGE 303 A 1 HETATM 4 O O2 PGE . . . D 4 -29.481 15.09 49.947 1 69.41 ? O2 PGE 303 A 1 HETATM 5 C C3 PGE . . . D 4 -28.359 14.882 50.791 1 61.47 ? C3 PGE 303 A 1 HETATM 6 C C4 PGE . . . D 4 -27.857 16.194 51.284 1 64.53 ? C4 PGE 303 A 1 HETATM 7 O O4 PGE . . . D 4 -26.247 19.084 53.969 1 64.33 ? O4 PGE 303 A 1 HETATM 8 C C6 PGE . . . D 4 -26.131 18.157 52.914 1 55.61 ? C6 PGE 303 A 1 HETATM 9 C C5 PGE . . . D 4 -26.754 16.855 53.274 1 59.23 ? C5 PGE 303 A 1 HETATM 10 O O3 PGE . . . D 4 -26.743 15.996 52.14 1 65.56 ? O3 PGE 303 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 10 #