data_6GU6 # _model_server_result.job_id LaVLRBAPoKOlL-Xyn0-pQA _model_server_result.datetime_utc '2024-11-23 00:30:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6gu6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 6GU6 # _exptl.entry_id 6GU6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 397.494 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-[({3-ethyl-5-[(2S)-2-(2-hydroxyethyl)piperidin-1-yl]pyrazolo[1,5-a]pyrimidin-7-yl}amino)methyl]-1-hydroxypyridinium _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6GU6 _cell.length_a 93.704 _cell.length_b 97.232 _cell.length_c 108.564 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6GU6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H29 N6 O2 1' _chem_comp.formula_weight 397.494 _chem_comp.id 1QK _chem_comp.mon_nstd_flag . _chem_comp.name 3-[({3-ethyl-5-[(2S)-2-(2-hydroxyethyl)piperidin-1-yl]pyrazolo[1,5-a]pyrimidin-7-yl}amino)methyl]-1-hydroxypyridinium _chem_comp.type non-polymer _chem_comp.pdbx_synonyms DINACICLIB # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C02 C01 1QK sing 1 n n C02 C03 1QK sing 2 n n C04 C03 1QK sing 3 n y C04 N05 1QK doub 4 n y C03 C07 1QK doub 5 n y N05 N06 1QK sing 6 n y C07 N06 1QK sing 7 n y C07 N08 1QK sing 8 n y O29 C28 1QK sing 9 n n N06 C11 1QK sing 10 n y C28 C27 1QK sing 11 n n N08 C09 1QK doub 12 n y C11 N12 1QK sing 13 n n C11 C10 1QK doub 14 n y N12 C13 1QK sing 15 n n C09 C10 1QK sing 16 n y C09 N21 1QK sing 17 n n C27 C26 1QK sing 18 n n C26 N21 1QK sing 19 n n C26 C25 1QK sing 20 n n N21 C22 1QK sing 21 n n C13 C14 1QK sing 22 n n C15 C14 1QK doub 23 n y C15 C16 1QK sing 24 n y C25 C24 1QK sing 25 n n C14 C19 1QK sing 26 n y C16 C17 1QK doub 27 n y C22 C23 1QK sing 28 n n C24 C23 1QK sing 29 n n C19 N18 1QK doub 30 n y C17 N18 1QK sing 31 n y N18 O20 1QK sing 32 n n C10 H1 1QK sing 33 n n N12 H2 1QK sing 34 n n C13 H3 1QK sing 35 n n C13 H4 1QK sing 36 n n C15 H5 1QK sing 37 n n C17 H6 1QK sing 38 n n C22 H7 1QK sing 39 n n C22 H8 1QK sing 40 n n C24 H9 1QK sing 41 n n C24 H10 1QK sing 42 n n C26 H11 1QK sing 43 n n C28 H12 1QK sing 44 n n C28 H13 1QK sing 45 n n C01 H14 1QK sing 46 n n C01 H15 1QK sing 47 n n C01 H16 1QK sing 48 n n C02 H17 1QK sing 49 n n C02 H18 1QK sing 50 n n C04 H19 1QK sing 51 n n C16 H20 1QK sing 52 n n C19 H21 1QK sing 53 n n O20 H22 1QK sing 54 n n C23 H23 1QK sing 55 n n C23 H24 1QK sing 56 n n C25 H25 1QK sing 57 n n C25 H26 1QK sing 58 n n C27 H27 1QK sing 59 n n C27 H28 1QK sing 60 n n O29 H29 1QK sing 61 n n # _atom_sites.entry_id 6GU6 _atom_sites.fract_transf_matrix[1][1] 0.010672 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010285 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009211 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 1QK A 1 301 1 1QK DRG . D 4 HOH A 1 401 79 HOH HOH . D 4 HOH A 2 402 19 HOH HOH . D 4 HOH A 3 403 71 HOH HOH . D 4 HOH A 4 404 63 HOH HOH . D 4 HOH A 5 405 82 HOH HOH . D 4 HOH A 6 406 47 HOH HOH . D 4 HOH A 7 407 75 HOH HOH . D 4 HOH A 8 408 66 HOH HOH . D 4 HOH A 9 409 24 HOH HOH . D 4 HOH A 10 410 73 HOH HOH . D 4 HOH A 11 411 2 HOH HOH . D 4 HOH A 12 412 7 HOH HOH . D 4 HOH A 13 413 13 HOH HOH . D 4 HOH A 14 414 54 HOH HOH . D 4 HOH A 15 415 6 HOH HOH . D 4 HOH A 16 416 34 HOH HOH . D 4 HOH A 17 417 20 HOH HOH . D 4 HOH A 18 418 18 HOH HOH . D 4 HOH A 19 419 85 HOH HOH . D 4 HOH A 20 420 28 HOH HOH . D 4 HOH A 21 421 72 HOH HOH . D 4 HOH A 22 422 17 HOH HOH . D 4 HOH A 23 423 9 HOH HOH . D 4 HOH A 24 424 40 HOH HOH . D 4 HOH A 25 425 38 HOH HOH . D 4 HOH A 26 426 3 HOH HOH . D 4 HOH A 27 427 14 HOH HOH . D 4 HOH A 28 428 55 HOH HOH . D 4 HOH A 29 429 56 HOH HOH . D 4 HOH A 30 430 57 HOH HOH . D 4 HOH A 31 431 12 HOH HOH . D 4 HOH A 32 432 59 HOH HOH . D 4 HOH A 33 433 11 HOH HOH . D 4 HOH A 34 434 50 HOH HOH . D 4 HOH A 35 435 39 HOH HOH . D 4 HOH A 36 436 10 HOH HOH . D 4 HOH A 37 437 67 HOH HOH . D 4 HOH A 38 438 62 HOH HOH . D 4 HOH A 39 439 60 HOH HOH . D 4 HOH A 40 440 25 HOH HOH . D 4 HOH A 41 441 69 HOH HOH . D 4 HOH A 42 442 35 HOH HOH . D 4 HOH A 43 443 64 HOH HOH . D 4 HOH A 44 444 52 HOH HOH . D 4 HOH A 45 445 23 HOH HOH . D 4 HOH A 46 446 30 HOH HOH . D 4 HOH A 47 447 16 HOH HOH . D 4 HOH A 48 448 22 HOH HOH . D 4 HOH A 49 449 5 HOH HOH . D 4 HOH A 50 450 70 HOH HOH . D 4 HOH A 51 451 78 HOH HOH . D 4 HOH A 52 452 29 HOH HOH . D 4 HOH A 53 453 68 HOH HOH . D 4 HOH A 54 454 86 HOH HOH . D 4 HOH A 55 455 41 HOH HOH . D 4 HOH A 56 456 37 HOH HOH . D 4 HOH A 57 457 33 HOH HOH . D 4 HOH A 58 458 36 HOH HOH . D 4 HOH A 59 459 4 HOH HOH . D 4 HOH A 60 460 42 HOH HOH . D 4 HOH A 61 461 43 HOH HOH . D 4 HOH A 62 462 1 HOH HOH . D 4 HOH A 63 463 21 HOH HOH . D 4 HOH A 64 464 45 HOH HOH . D 4 HOH A 65 465 83 HOH HOH . D 4 HOH A 66 466 61 HOH HOH . D 4 HOH A 67 467 26 HOH HOH . D 4 HOH A 68 468 51 HOH HOH . D 4 HOH A 69 469 48 HOH HOH . D 4 HOH A 70 470 49 HOH HOH . D 4 HOH A 71 471 58 HOH HOH . D 4 HOH A 72 472 44 HOH HOH . D 4 HOH A 73 473 77 HOH HOH . D 4 HOH A 74 474 76 HOH HOH . D 4 HOH A 75 475 74 HOH HOH . D 4 HOH A 76 476 53 HOH HOH . D 4 HOH A 77 477 80 HOH HOH . D 4 HOH A 78 478 81 HOH HOH . E 4 HOH B 1 101 31 HOH HOH . E 4 HOH B 2 102 32 HOH HOH . E 4 HOH B 3 103 15 HOH HOH . E 4 HOH B 4 104 27 HOH HOH . E 4 HOH B 5 105 46 HOH HOH . E 4 HOH B 6 106 8 HOH HOH . E 4 HOH B 7 107 65 HOH HOH . E 4 HOH B 8 108 84 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 1QK . . . C 3 23.804 22.123 -1.332 1 35.73 ? C10 1QK 301 A 1 HETATM 2 N N12 1QK . . . C 3 23.683 24.523 -1.784 1 41.68 ? N12 1QK 301 A 1 HETATM 3 C C13 1QK . . . C 3 24.984 24.85 -1.239 1 51.29 ? C13 1QK 301 A 1 HETATM 4 C C15 1QK . . . C 3 27.066 23.629 -1.947 1 70 ? C15 1QK 301 A 1 HETATM 5 C C17 1QK . . . C 3 28.441 24.475 -3.708 1 75.38 ? C17 1QK 301 A 1 HETATM 6 C C22 1QK . . . C 3 25.192 19.847 -0.295 1 41.08 ? C22 1QK 301 A 1 HETATM 7 C C24 1QK . . . C 3 25.664 17.786 -1.525 1 41.98 ? C24 1QK 301 A 1 HETATM 8 C C26 1QK . . . C 3 23.255 18.394 -1.024 1 41.78 ? C26 1QK 301 A 1 HETATM 9 C C28 1QK . . . C 3 21.133 17.901 0.26 1 48.67 ? C28 1QK 301 A 1 HETATM 10 C C01 1QK . . . C 3 17.877 20.808 -2.038 1 41.75 ? C01 1QK 301 A 1 HETATM 11 C C02 1QK . . . C 3 19.004 20.942 -3.048 1 35.31 ? C02 1QK 301 A 1 HETATM 12 C C03 1QK . . . C 3 20.004 22.025 -2.767 1 32.48 ? C03 1QK 301 A 1 HETATM 13 C C04 1QK . . . C 3 19.899 23.383 -2.981 1 35.68 ? C04 1QK 301 A 1 HETATM 14 N N05 1QK . . . C 3 21.02 24.04 -2.685 1 35.2 ? N05 1QK 301 A 1 HETATM 15 N N06 1QK . . . C 3 21.868 23.067 -2.226 1 34.52 ? N06 1QK 301 A 1 HETATM 16 C C07 1QK . . . C 3 21.282 21.809 -2.272 1 33.55 ? C07 1QK 301 A 1 HETATM 17 N N08 1QK . . . C 3 21.933 20.7 -1.849 1 33.27 ? N08 1QK 301 A 1 HETATM 18 C C09 1QK . . . C 3 23.197 20.858 -1.383 1 37.91 ? C09 1QK 301 A 1 HETATM 19 C C11 1QK . . . C 3 23.132 23.258 -1.767 1 38.71 ? C11 1QK 301 A 1 HETATM 20 C C14 1QK . . . C 3 26.156 24.651 -2.171 1 59.64 ? C14 1QK 301 A 1 HETATM 21 C C16 1QK . . . C 3 28.214 23.547 -2.723 1 72.57 ? C16 1QK 301 A 1 HETATM 22 N N18 1QK . . . C 3 27.541 25.452 -3.935 1 75.7 ? N18 1QK 301 A 1 HETATM 23 C C19 1QK . . . C 3 26.387 25.51 -3.228 1 67.74 ? C19 1QK 301 A 1 HETATM 24 O O20 1QK . . . C 3 27.792 26.356 -4.859 1 87.33 ? O20 1QK 301 A 1 HETATM 25 N N21 1QK . . . C 3 23.876 19.739 -0.946 1 38.95 ? N21 1QK 301 A 1 HETATM 26 C C23 1QK . . . C 3 25.901 18.523 -0.251 1 41.33 ? C23 1QK 301 A 1 HETATM 27 C C25 1QK . . . C 3 24.214 17.34 -1.571 1 45.49 ? C25 1QK 301 A 1 HETATM 28 C C27 1QK . . . C 3 22.637 18.012 0.324 1 43.5 ? C27 1QK 301 A 1 HETATM 29 O O29 1QK . . . C 3 20.509 19.093 -0.203 1 45.67 ? O29 1QK 301 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 213 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 29 #