data_6GV0 # _model_server_result.job_id zw3ECVM7xw2MT8v3qdpFAA _model_server_result.datetime_utc '2024-11-05 00:19:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6gv0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":101}' # _entry.id 6GV0 # _exptl.entry_id 6GV0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6GV0 _cell.length_a 82.44 _cell.length_b 82.44 _cell.length_c 33.65 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6GV0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 G CYS 6 1_555 A SG CYS 11 G CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? disulf ? disulf2 A SG CYS 7 G CYS 7 1_555 B SG CYS 7 B CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf3 A SG CYS 20 G CYS 20 1_555 B SG CYS 19 B CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf4 C SG CYS 6 I CYS 6 1_555 C SG CYS 11 I CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf5 C SG CYS 7 I CYS 7 1_555 D SG CYS 7 D CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? disulf ? disulf6 C SG CYS 20 I CYS 20 1_555 D SG CYS 19 D CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? metalc ? metalc1 B NE2 HIS 10 B HIS 10 1_555 E ZN ZN . B ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? metalc ? metalc2 B NE2 HIS 10 B HIS 10 1_555 E ZN ZN . B ZN 101 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? metalc ? metalc3 E ZN ZN . B ZN 101 1_555 J O HOH . B HOH 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? metalc ? metalc4 E ZN ZN . B ZN 101 1_555 J O HOH . B HOH 219 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? metalc ? metalc5 D NE2 HIS 10 D HIS 10 1_555 F ZN ZN . D ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? metalc ? metalc6 D NE2 HIS 10 D HIS 10 1_555 F ZN ZN . D ZN 101 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? metalc ? metalc7 F ZN ZN . D ZN 101 1_555 L O HOH . D HOH 225 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.982 ? metalc ? metalc8 F ZN ZN . D ZN 101 1_555 L O HOH . D HOH 225 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.982 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6GV0 _atom_sites.fract_transf_matrix[1][1] 0.01213 _atom_sites.fract_transf_matrix[1][2] 0.007003 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014007 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.029718 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ZN B 1 101 1 ZN ZN . F 3 ZN D 1 101 2 ZN ZN . G 4 FMT D 1 102 1 FMT FMT . H 4 FMT D 1 103 3 FMT FMT . I 5 HOH G 1 101 89 HOH HOH . I 5 HOH G 2 102 28 HOH HOH . I 5 HOH G 3 103 102 HOH HOH . I 5 HOH G 4 104 101 HOH HOH . I 5 HOH G 5 105 94 HOH HOH . I 5 HOH G 6 106 67 HOH HOH . I 5 HOH G 7 107 104 HOH HOH . I 5 HOH G 8 108 38 HOH HOH . I 5 HOH G 9 109 57 HOH HOH . I 5 HOH G 10 110 41 HOH HOH . I 5 HOH G 11 111 92 HOH HOH . I 5 HOH G 12 112 53 HOH HOH . J 5 HOH B 1 201 106 HOH HOH . J 5 HOH B 2 202 36 HOH HOH . J 5 HOH B 3 203 35 HOH HOH . J 5 HOH B 4 204 32 HOH HOH . J 5 HOH B 5 205 20 HOH HOH . J 5 HOH B 6 206 7 HOH HOH . J 5 HOH B 7 207 50 HOH HOH . J 5 HOH B 8 208 10 HOH HOH . J 5 HOH B 9 209 17 HOH HOH . J 5 HOH B 10 210 24 HOH HOH . J 5 HOH B 11 211 37 HOH HOH . J 5 HOH B 12 212 13 HOH HOH . J 5 HOH B 13 213 1 HOH HOH . J 5 HOH B 14 214 23 HOH HOH . J 5 HOH B 15 215 49 HOH HOH . J 5 HOH B 16 216 19 HOH HOH . J 5 HOH B 17 217 54 HOH HOH . J 5 HOH B 18 218 12 HOH HOH . J 5 HOH B 19 219 100 HOH HOH . J 5 HOH B 20 220 51 HOH HOH . K 5 HOH I 1 101 16 HOH HOH . K 5 HOH I 2 102 96 HOH HOH . K 5 HOH I 3 103 9 HOH HOH . K 5 HOH I 4 104 11 HOH HOH . K 5 HOH I 5 105 4 HOH HOH . K 5 HOH I 6 106 47 HOH HOH . K 5 HOH I 7 107 65 HOH HOH . K 5 HOH I 8 108 60 HOH HOH . K 5 HOH I 9 109 44 HOH HOH . K 5 HOH I 10 110 48 HOH HOH . K 5 HOH I 11 111 105 HOH HOH . K 5 HOH I 12 112 91 HOH HOH . K 5 HOH I 13 113 107 HOH HOH . K 5 HOH I 14 114 46 HOH HOH . L 5 HOH D 1 201 64 HOH HOH . L 5 HOH D 2 202 29 HOH HOH . L 5 HOH D 3 203 5 HOH HOH . L 5 HOH D 4 204 30 HOH HOH . L 5 HOH D 5 205 31 HOH HOH . L 5 HOH D 6 206 6 HOH HOH . L 5 HOH D 7 207 85 HOH HOH . L 5 HOH D 8 208 3 HOH HOH . L 5 HOH D 9 209 22 HOH HOH . L 5 HOH D 10 210 8 HOH HOH . L 5 HOH D 11 211 14 HOH HOH . L 5 HOH D 12 212 2 HOH HOH . L 5 HOH D 13 213 25 HOH HOH . L 5 HOH D 14 214 90 HOH HOH . L 5 HOH D 15 215 27 HOH HOH . L 5 HOH D 16 216 18 HOH HOH . L 5 HOH D 17 217 15 HOH HOH . L 5 HOH D 18 218 26 HOH HOH . L 5 HOH D 19 219 33 HOH HOH . L 5 HOH D 20 220 34 HOH HOH . L 5 HOH D 21 221 45 HOH HOH . L 5 HOH D 22 222 103 HOH HOH . L 5 HOH D 23 223 70 HOH HOH . L 5 HOH D 24 224 39 HOH HOH . L 5 HOH D 25 225 95 HOH HOH . L 5 HOH D 26 226 82 HOH HOH . L 5 HOH D 27 227 58 HOH HOH . L 5 HOH D 28 228 42 HOH HOH . L 5 HOH D 29 229 62 HOH HOH . L 5 HOH D 30 230 40 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x 0 _atom_site.Cartn_y 0 _atom_site.Cartn_z 17.713 _atom_site.occupancy 0.15 _atom_site.B_iso_or_equiv 23.24 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 101 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #