data_6GW4 # _model_server_result.job_id 3MKQvZ8x2A4P-5a4Ubj0Fw _model_server_result.datetime_utc '2024-10-13 08:18:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6gw4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":602}' # _entry.id 6GW4 # _exptl.entry_id 6GW4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6GW4 _cell.length_a 81.24 _cell.length_b 81.24 _cell.length_c 223.91 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6GW4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 161 n n C1 C2 EDO sing 162 n n C1 H11 EDO sing 163 n n C1 H12 EDO sing 164 n n O1 HO1 EDO sing 165 n n C2 O2 EDO sing 166 n n C2 H21 EDO sing 167 n n C2 H22 EDO sing 168 n n O2 HO2 EDO sing 169 n n # _atom_sites.entry_id 6GW4 _atom_sites.fract_transf_matrix[1][1] 0.012309 _atom_sites.fract_transf_matrix[1][2] 0.007107 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014213 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004466 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CHO A 1 600 600 CHO CHO . C 3 EDO A 1 601 601 EDO EDO . D 3 EDO A 1 602 602 EDO EDO . E 3 EDO A 1 603 603 EDO EDO . F 3 EDO A 1 604 604 EDO EDO . G 4 HOH A 1 701 755 HOH HOH . G 4 HOH A 2 702 757 HOH HOH . G 4 HOH A 3 703 717 HOH HOH . G 4 HOH A 4 704 793 HOH HOH . G 4 HOH A 5 705 760 HOH HOH . G 4 HOH A 6 706 723 HOH HOH . G 4 HOH A 7 707 754 HOH HOH . G 4 HOH A 8 708 758 HOH HOH . G 4 HOH A 9 709 741 HOH HOH . G 4 HOH A 10 710 772 HOH HOH . G 4 HOH A 11 711 743 HOH HOH . G 4 HOH A 12 712 771 HOH HOH . G 4 HOH A 13 713 750 HOH HOH . G 4 HOH A 14 714 773 HOH HOH . G 4 HOH A 15 715 711 HOH HOH . G 4 HOH A 16 716 761 HOH HOH . G 4 HOH A 17 717 726 HOH HOH . G 4 HOH A 18 718 708 HOH HOH . G 4 HOH A 19 719 727 HOH HOH . G 4 HOH A 20 720 705 HOH HOH . G 4 HOH A 21 721 775 HOH HOH . G 4 HOH A 22 722 702 HOH HOH . G 4 HOH A 23 723 712 HOH HOH . G 4 HOH A 24 724 722 HOH HOH . G 4 HOH A 25 725 746 HOH HOH . G 4 HOH A 26 726 792 HOH HOH . G 4 HOH A 27 727 732 HOH HOH . G 4 HOH A 28 728 745 HOH HOH . G 4 HOH A 29 729 703 HOH HOH . G 4 HOH A 30 730 713 HOH HOH . G 4 HOH A 31 731 753 HOH HOH . G 4 HOH A 32 732 707 HOH HOH . G 4 HOH A 33 733 704 HOH HOH . G 4 HOH A 34 734 747 HOH HOH . G 4 HOH A 35 735 770 HOH HOH . G 4 HOH A 36 736 718 HOH HOH . G 4 HOH A 37 737 776 HOH HOH . G 4 HOH A 38 738 779 HOH HOH . G 4 HOH A 39 739 701 HOH HOH . G 4 HOH A 40 740 744 HOH HOH . G 4 HOH A 41 741 756 HOH HOH . G 4 HOH A 42 742 768 HOH HOH . G 4 HOH A 43 743 700 HOH HOH . G 4 HOH A 44 744 789 HOH HOH . G 4 HOH A 45 745 749 HOH HOH . G 4 HOH A 46 746 716 HOH HOH . G 4 HOH A 47 747 777 HOH HOH . G 4 HOH A 48 748 734 HOH HOH . G 4 HOH A 49 749 794 HOH HOH . G 4 HOH A 50 750 752 HOH HOH . G 4 HOH A 51 751 733 HOH HOH . G 4 HOH A 52 752 736 HOH HOH . G 4 HOH A 53 753 774 HOH HOH . G 4 HOH A 54 754 706 HOH HOH . G 4 HOH A 55 755 729 HOH HOH . G 4 HOH A 56 756 739 HOH HOH . G 4 HOH A 57 757 735 HOH HOH . G 4 HOH A 58 758 710 HOH HOH . G 4 HOH A 59 759 784 HOH HOH . G 4 HOH A 60 760 762 HOH HOH . G 4 HOH A 61 761 780 HOH HOH . G 4 HOH A 62 762 759 HOH HOH . G 4 HOH A 63 763 751 HOH HOH . G 4 HOH A 64 764 765 HOH HOH . G 4 HOH A 65 765 783 HOH HOH . G 4 HOH A 66 766 785 HOH HOH . G 4 HOH A 67 767 787 HOH HOH . G 4 HOH A 68 768 737 HOH HOH . G 4 HOH A 69 769 766 HOH HOH . G 4 HOH A 70 770 786 HOH HOH . G 4 HOH A 71 771 709 HOH HOH . G 4 HOH A 72 772 738 HOH HOH . G 4 HOH A 73 773 748 HOH HOH . G 4 HOH A 74 774 725 HOH HOH . G 4 HOH A 75 775 730 HOH HOH . G 4 HOH A 76 776 764 HOH HOH . G 4 HOH A 77 777 781 HOH HOH . G 4 HOH A 78 778 782 HOH HOH . G 4 HOH A 79 779 797 HOH HOH . G 4 HOH A 80 780 778 HOH HOH . G 4 HOH A 81 781 728 HOH HOH . G 4 HOH A 82 782 742 HOH HOH . G 4 HOH A 83 783 767 HOH HOH . G 4 HOH A 84 784 791 HOH HOH . G 4 HOH A 85 785 790 HOH HOH . G 4 HOH A 86 786 788 HOH HOH . G 4 HOH A 87 787 769 HOH HOH . G 4 HOH A 88 788 714 HOH HOH . G 4 HOH A 89 789 715 HOH HOH . G 4 HOH A 90 790 795 HOH HOH . G 4 HOH A 91 791 763 HOH HOH . G 4 HOH A 92 792 724 HOH HOH . G 4 HOH A 93 793 720 HOH HOH . G 4 HOH A 94 794 796 HOH HOH . G 4 HOH A 95 795 719 HOH HOH . G 4 HOH A 96 796 731 HOH HOH . G 4 HOH A 97 797 721 HOH HOH . G 4 HOH A 98 798 740 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 3 32.098 -43.168 -12.017 1 53.82 ? C1 EDO 602 A 1 HETATM 2 O O1 EDO . . . D 3 30.753 -42.701 -11.855 1 56.03 ? O1 EDO 602 A 1 HETATM 3 C C2 EDO . . . D 3 32.984 -42.545 -10.946 1 51.04 ? C2 EDO 602 A 1 HETATM 4 O O2 EDO . . . D 3 34.357 -42.828 -11.235 1 53.39 ? O2 EDO 602 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #