data_6GWC # _model_server_result.job_id c1ukmK3rEB13NaiOiUhE7A _model_server_result.datetime_utc '2024-12-23 04:42:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6gwc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":603}' # _entry.id 6GWC # _exptl.entry_id 6GWC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.237 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6GWC _cell.length_a 102.346 _cell.length_b 102.346 _cell.length_c 216.207 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6GWC _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 I N N ? 7 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 D O3G GTP . A GTP 600 1_555 E MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc2 D O2B GTP . A GTP 600 1_555 E MG MG . A MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? metalc ? metalc3 E MG MG . A MG 601 1_555 K O HOH . A HOH 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc4 E MG MG . A MG 601 1_555 K O HOH . A HOH 722 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc5 E MG MG . A MG 601 1_555 K O HOH . A HOH 749 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? metalc ? metalc6 E MG MG . A MG 601 1_555 K O HOH . A HOH 750 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? metalc ? metalc7 G O3G GTP . B GTP 600 1_555 H MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.692 ? metalc ? metalc8 H MG MG . B MG 601 1_555 L O HOH . B HOH 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.782 ? metalc ? metalc9 H MG MG . B MG 601 1_555 L O HOH . B HOH 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? # _chem_comp.formula 'C6 H13 N O4 S' _chem_comp.formula_weight 195.237 _chem_comp.id MES _chem_comp.mon_nstd_flag . _chem_comp.name '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 MES sing 268 n n O1 C6 MES sing 269 n n C2 C3 MES sing 270 n n C2 H21 MES sing 271 n n C2 H22 MES sing 272 n n C3 N4 MES sing 273 n n C3 H31 MES sing 274 n n C3 H32 MES sing 275 n n N4 C5 MES sing 276 n n N4 C7 MES sing 277 n n N4 HN4 MES sing 278 n n C5 C6 MES sing 279 n n C5 H51 MES sing 280 n n C5 H52 MES sing 281 n n C6 H61 MES sing 282 n n C6 H62 MES sing 283 n n C7 C8 MES sing 284 n n C7 H71 MES sing 285 n n C7 H72 MES sing 286 n n C8 S MES sing 287 n n C8 H81 MES sing 288 n n C8 H82 MES sing 289 n n S O1S MES doub 290 n n S O2S MES doub 291 n n S O3S MES sing 292 n n # _atom_sites.entry_id 6GWC _atom_sites.fract_transf_matrix[1][1] 0.009771 _atom_sites.fract_transf_matrix[1][2] 0.005641 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011282 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004625 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 GTP A 1 600 600 GTP GTP . E 5 MG A 1 601 601 MG MG . F 6 PGE A 1 602 602 PGE PGE . G 4 GTP B 1 600 600 GTP GTP . H 5 MG B 1 601 601 MG MG . I 7 MES B 1 602 602 MES MES . J 7 MES B 1 603 603 MES MES . K 8 HOH A 1 701 147 HOH HOH . K 8 HOH A 2 702 151 HOH HOH . K 8 HOH A 3 703 158 HOH HOH . K 8 HOH A 4 704 105 HOH HOH . K 8 HOH A 5 705 156 HOH HOH . K 8 HOH A 6 706 116 HOH HOH . K 8 HOH A 7 707 71 HOH HOH . K 8 HOH A 8 708 121 HOH HOH . K 8 HOH A 9 709 26 HOH HOH . K 8 HOH A 10 710 35 HOH HOH . K 8 HOH A 11 711 57 HOH HOH . K 8 HOH A 12 712 4 HOH HOH . K 8 HOH A 13 713 154 HOH HOH . K 8 HOH A 14 714 66 HOH HOH . K 8 HOH A 15 715 148 HOH HOH . K 8 HOH A 16 716 74 HOH HOH . K 8 HOH A 17 717 72 HOH HOH . K 8 HOH A 18 718 5 HOH HOH . K 8 HOH A 19 719 3 HOH HOH . K 8 HOH A 20 720 19 HOH HOH . K 8 HOH A 21 721 92 HOH HOH . K 8 HOH A 22 722 150 HOH HOH . K 8 HOH A 23 723 6 HOH HOH . K 8 HOH A 24 724 51 HOH HOH . K 8 HOH A 25 725 157 HOH HOH . K 8 HOH A 26 726 16 HOH HOH . K 8 HOH A 27 727 127 HOH HOH . K 8 HOH A 28 728 38 HOH HOH . K 8 HOH A 29 729 173 HOH HOH . K 8 HOH A 30 730 22 HOH HOH . K 8 HOH A 31 731 45 HOH HOH . K 8 HOH A 32 732 28 HOH HOH . K 8 HOH A 33 733 111 HOH HOH . K 8 HOH A 34 734 8 HOH HOH . K 8 HOH A 35 735 65 HOH HOH . K 8 HOH A 36 736 78 HOH HOH . K 8 HOH A 37 737 102 HOH HOH . K 8 HOH A 38 738 162 HOH HOH . K 8 HOH A 39 739 161 HOH HOH . K 8 HOH A 40 740 2 HOH HOH . K 8 HOH A 41 741 113 HOH HOH . K 8 HOH A 42 742 129 HOH HOH . K 8 HOH A 43 743 82 HOH HOH . K 8 HOH A 44 744 133 HOH HOH . K 8 HOH A 45 745 164 HOH HOH . K 8 HOH A 46 746 119 HOH HOH . K 8 HOH A 47 747 21 HOH HOH . K 8 HOH A 48 748 67 HOH HOH . K 8 HOH A 49 749 152 HOH HOH . K 8 HOH A 50 750 149 HOH HOH . K 8 HOH A 51 751 63 HOH HOH . K 8 HOH A 52 752 10 HOH HOH . K 8 HOH A 53 753 50 HOH HOH . K 8 HOH A 54 754 61 HOH HOH . K 8 HOH A 55 755 56 HOH HOH . K 8 HOH A 56 756 103 HOH HOH . K 8 HOH A 57 757 73 HOH HOH . K 8 HOH A 58 758 123 HOH HOH . K 8 HOH A 59 759 76 HOH HOH . K 8 HOH A 60 760 25 HOH HOH . K 8 HOH A 61 761 90 HOH HOH . K 8 HOH A 62 762 53 HOH HOH . K 8 HOH A 63 763 83 HOH HOH . K 8 HOH A 64 764 136 HOH HOH . K 8 HOH A 65 765 39 HOH HOH . K 8 HOH A 66 766 93 HOH HOH . K 8 HOH A 67 767 18 HOH HOH . K 8 HOH A 68 768 176 HOH HOH . K 8 HOH A 69 769 112 HOH HOH . K 8 HOH A 70 770 101 HOH HOH . K 8 HOH A 71 771 174 HOH HOH . K 8 HOH A 72 772 68 HOH HOH . K 8 HOH A 73 773 60 HOH HOH . K 8 HOH A 74 774 27 HOH HOH . K 8 HOH A 75 775 30 HOH HOH . K 8 HOH A 76 776 36 HOH HOH . K 8 HOH A 77 777 110 HOH HOH . K 8 HOH A 78 778 17 HOH HOH . K 8 HOH A 79 779 118 HOH HOH . K 8 HOH A 80 780 23 HOH HOH . K 8 HOH A 81 781 15 HOH HOH . K 8 HOH A 82 782 163 HOH HOH . K 8 HOH A 83 783 106 HOH HOH . K 8 HOH A 84 784 14 HOH HOH . K 8 HOH A 85 785 104 HOH HOH . K 8 HOH A 86 786 172 HOH HOH . K 8 HOH A 87 787 75 HOH HOH . K 8 HOH A 88 788 155 HOH HOH . K 8 HOH A 89 789 41 HOH HOH . K 8 HOH A 90 790 97 HOH HOH . K 8 HOH A 91 791 169 HOH HOH . K 8 HOH A 92 792 89 HOH HOH . K 8 HOH A 93 793 167 HOH HOH . K 8 HOH A 94 794 143 HOH HOH . K 8 HOH A 95 795 43 HOH HOH . K 8 HOH A 96 796 98 HOH HOH . K 8 HOH A 97 797 140 HOH HOH . K 8 HOH A 98 798 100 HOH HOH . K 8 HOH A 99 799 125 HOH HOH . K 8 HOH A 100 800 88 HOH HOH . K 8 HOH A 101 801 159 HOH HOH . K 8 HOH A 102 802 55 HOH HOH . K 8 HOH A 103 803 114 HOH HOH . K 8 HOH A 104 804 86 HOH HOH . K 8 HOH A 105 805 108 HOH HOH . K 8 HOH A 106 806 94 HOH HOH . K 8 HOH A 107 807 96 HOH HOH . K 8 HOH A 108 808 40 HOH HOH . K 8 HOH A 109 809 31 HOH HOH . K 8 HOH A 110 810 80 HOH HOH . K 8 HOH A 111 811 87 HOH HOH . K 8 HOH A 112 812 79 HOH HOH . K 8 HOH A 113 813 32 HOH HOH . K 8 HOH A 114 814 144 HOH HOH . K 8 HOH A 115 815 131 HOH HOH . K 8 HOH A 116 816 138 HOH HOH . L 8 HOH B 1 701 117 HOH HOH . L 8 HOH B 2 702 20 HOH HOH . L 8 HOH B 3 703 153 HOH HOH . L 8 HOH B 4 704 168 HOH HOH . L 8 HOH B 5 705 7 HOH HOH . L 8 HOH B 6 706 1 HOH HOH . L 8 HOH B 7 707 120 HOH HOH . L 8 HOH B 8 708 81 HOH HOH . L 8 HOH B 9 709 44 HOH HOH . L 8 HOH B 10 710 37 HOH HOH . L 8 HOH B 11 711 170 HOH HOH . L 8 HOH B 12 712 142 HOH HOH . L 8 HOH B 13 713 24 HOH HOH . L 8 HOH B 14 714 171 HOH HOH . L 8 HOH B 15 715 49 HOH HOH . L 8 HOH B 16 716 132 HOH HOH . L 8 HOH B 17 717 11 HOH HOH . L 8 HOH B 18 718 146 HOH HOH . L 8 HOH B 19 719 175 HOH HOH . L 8 HOH B 20 720 141 HOH HOH . L 8 HOH B 21 721 91 HOH HOH . L 8 HOH B 22 722 48 HOH HOH . L 8 HOH B 23 723 42 HOH HOH . L 8 HOH B 24 724 34 HOH HOH . L 8 HOH B 25 725 124 HOH HOH . L 8 HOH B 26 726 64 HOH HOH . L 8 HOH B 27 727 109 HOH HOH . L 8 HOH B 28 728 107 HOH HOH . L 8 HOH B 29 729 122 HOH HOH . L 8 HOH B 30 730 69 HOH HOH . L 8 HOH B 31 731 29 HOH HOH . M 8 HOH C 1 301 84 HOH HOH . M 8 HOH C 2 302 58 HOH HOH . M 8 HOH C 3 303 62 HOH HOH . M 8 HOH C 4 304 47 HOH HOH . M 8 HOH C 5 305 137 HOH HOH . M 8 HOH C 6 306 33 HOH HOH . M 8 HOH C 7 307 9 HOH HOH . M 8 HOH C 8 308 139 HOH HOH . M 8 HOH C 9 309 128 HOH HOH . M 8 HOH C 10 310 46 HOH HOH . M 8 HOH C 11 311 85 HOH HOH . M 8 HOH C 12 312 115 HOH HOH . M 8 HOH C 13 313 70 HOH HOH . M 8 HOH C 14 314 160 HOH HOH . M 8 HOH C 15 315 166 HOH HOH . M 8 HOH C 16 316 54 HOH HOH . M 8 HOH C 17 317 12 HOH HOH . M 8 HOH C 18 318 52 HOH HOH . M 8 HOH C 19 319 145 HOH HOH . M 8 HOH C 20 320 13 HOH HOH . M 8 HOH C 21 321 59 HOH HOH . M 8 HOH C 22 322 165 HOH HOH . M 8 HOH C 23 323 135 HOH HOH . M 8 HOH C 24 324 95 HOH HOH . M 8 HOH C 25 325 126 HOH HOH . M 8 HOH C 26 326 77 HOH HOH . M 8 HOH C 27 327 99 HOH HOH . M 8 HOH C 28 328 134 HOH HOH . M 8 HOH C 29 329 130 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 MES . . . J 7 36.749 -28.003 -17.692 1 134.83 ? O1 MES 603 B 1 HETATM 2 C C2 MES . . . J 7 35.572 -27.433 -18.26 1 134.99 ? C2 MES 603 B 1 HETATM 3 C C3 MES . . . J 7 34.449 -27.374 -17.255 1 135.47 ? C3 MES 603 B 1 HETATM 4 N N4 MES . . . J 7 34.161 -28.742 -16.733 1 138.81 ? N4 MES 603 B 1 HETATM 5 C C5 MES . . . J 7 35.412 -29.347 -16.187 1 138.88 ? C5 MES 603 B 1 HETATM 6 C C6 MES . . . J 7 36.492 -29.326 -17.236 1 138.16 ? C6 MES 603 B 1 HETATM 7 C C7 MES . . . J 7 33.066 -28.716 -15.708 1 140.05 ? C7 MES 603 B 1 HETATM 8 C C8 MES . . . J 7 32.415 -30.066 -15.6 1 144.45 ? C8 MES 603 B 1 HETATM 9 S S MES . . . J 7 31.305 -30.074 -14.213 1 140.29 ? S MES 603 B 1 HETATM 10 O O1S MES . . . J 7 30.651 -28.777 -14.205 1 137.7 ? O1S MES 603 B 1 HETATM 11 O O2S MES . . . J 7 30.377 -31.166 -14.449 1 144.24 ? O2S MES 603 B 1 HETATM 12 O O3S MES . . . J 7 32.128 -30.291 -13.036 1 138.76 ? O3S MES 603 B 1 HETATM 13 H H21 MES . . . J 7 35.277 -27.937 -19.178 1 138.01 ? H21 MES 603 B 1 HETATM 14 H H22 MES . . . J 7 35.887 -26.433 -18.553 1 132.58 ? H22 MES 603 B 1 HETATM 15 H H31 MES . . . J 7 34.701 -26.698 -16.438 1 132.93 ? H31 MES 603 B 1 HETATM 16 H H32 MES . . . J 7 33.552 -26.951 -17.704 1 136.4 ? H32 MES 603 B 1 HETATM 17 H HN4 MES . . . J 7 33.851 -29.315 -17.512 1 142.41 ? HN4 MES 603 B 1 HETATM 18 H H51 MES . . . J 7 35.24 -30.366 -15.844 1 142.68 ? H51 MES 603 B 1 HETATM 19 H H52 MES . . . J 7 35.732 -28.805 -15.3 1 137.04 ? H52 MES 603 B 1 HETATM 20 H H61 MES . . . J 7 37.405 -29.815 -16.9 1 139.06 ? H61 MES 603 B 1 HETATM 21 H H62 MES . . . J 7 36.175 -29.863 -18.128 1 141.4 ? H62 MES 603 B 1 HETATM 22 H H71 MES . . . J 7 33.478 -28.423 -14.744 1 138.4 ? H71 MES 603 B 1 HETATM 23 H H72 MES . . . J 7 32.335 -27.951 -15.966 1 139.87 ? H72 MES 603 B 1 HETATM 24 H H81 MES . . . J 7 31.864 -30.349 -16.494 1 149.55 ? H81 MES 603 B 1 HETATM 25 H H82 MES . . . J 7 33.116 -30.889 -15.471 1 148 ? H82 MES 603 B 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 45 _model_server_stats.query_time_ms 424 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 25 #