data_6GWU # _model_server_result.job_id AMk3SG-6WVvv7eIkm9Hx0w _model_server_result.datetime_utc '2024-11-22 17:36:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6gwu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":303}' # _entry.id 6GWU # _exptl.entry_id 6GWU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BETA-MERCAPTOETHANOL _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6GWU _cell.length_a 69.363 _cell.length_b 90.28 _cell.length_c 167.105 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6GWU _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 G N N ? 3 M N N ? 3 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 51 A CYS 76 1_555 E ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? metalc ? metalc2 A NE2 HIS 106 A HIS 131 1_555 E ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? metalc ? metalc3 A SG CYS 109 A CYS 134 1_555 E ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc4 E ZN ZN . A ZN 301 1_555 G S2 BME . A BME 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? metalc ? metalc5 F S2 BME . A BME 302 1_555 J ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.502 ? metalc ? metalc6 B SG CYS 51 B CYS 76 1_555 J ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? metalc ? metalc7 B NE2 HIS 106 B HIS 131 1_555 J ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? metalc ? metalc8 B SG CYS 109 B CYS 134 1_555 J ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc9 C SG CYS 51 C CYS 76 1_555 L ZN ZN . C ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? metalc ? metalc10 C NE2 HIS 106 C HIS 131 1_555 L ZN ZN . C ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.5 ? metalc ? metalc11 C SG CYS 109 C CYS 134 1_555 L ZN ZN . C ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? metalc ? metalc12 L ZN ZN . C ZN 301 1_555 M S2 BME . C BME 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.904 ? metalc ? metalc13 D SG CYS 51 D CYS 76 1_555 N ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? metalc ? metalc14 D NE2 HIS 106 D HIS 131 1_555 N ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc15 D SG CYS 109 D CYS 134 1_555 N ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc16 N ZN ZN . D ZN 301 1_555 O S2 BME . D BME 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.842 ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id BME _chem_comp.mon_nstd_flag . _chem_comp.name BETA-MERCAPTOETHANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BME sing 70 n n C1 O1 BME sing 71 n n C1 H11 BME sing 72 n n C1 H12 BME sing 73 n n C2 S2 BME sing 74 n n C2 H21 BME sing 75 n n C2 H22 BME sing 76 n n O1 HO1 BME sing 77 n n S2 HS2 BME sing 78 n n # _atom_sites.entry_id 6GWU _atom_sites.fract_transf_matrix[1][1] 0.014417 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011077 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005984 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 ZN A 1 301 301 ZN ZN . F 3 BME A 1 302 2 BME BME . G 3 BME A 1 303 5 BME BME . H 4 PEG A 1 304 1 PEG PEG . I 4 PEG A 1 305 2 PEG PEG . J 2 ZN B 1 301 301 ZN ZN . K 5 PGE B 1 302 1 PGE PGE . L 2 ZN C 1 301 301 ZN ZN . M 3 BME C 1 302 4 BME BME . N 2 ZN D 1 301 301 ZN ZN . O 3 BME D 1 302 3 BME BME . P 6 HOH A 1 401 22 HOH HOH . P 6 HOH A 2 402 26 HOH HOH . P 6 HOH A 3 403 18 HOH HOH . P 6 HOH A 4 404 15 HOH HOH . P 6 HOH A 5 405 24 HOH HOH . P 6 HOH A 6 406 32 HOH HOH . P 6 HOH A 7 407 10 HOH HOH . P 6 HOH A 8 408 35 HOH HOH . P 6 HOH A 9 409 4 HOH HOH . P 6 HOH A 10 410 14 HOH HOH . P 6 HOH A 11 411 28 HOH HOH . P 6 HOH A 12 412 36 HOH HOH . P 6 HOH A 13 413 8 HOH HOH . P 6 HOH A 14 414 29 HOH HOH . Q 6 HOH B 1 401 20 HOH HOH . Q 6 HOH B 2 402 21 HOH HOH . Q 6 HOH B 3 403 16 HOH HOH . Q 6 HOH B 4 404 11 HOH HOH . Q 6 HOH B 5 405 13 HOH HOH . Q 6 HOH B 6 406 7 HOH HOH . Q 6 HOH B 7 407 38 HOH HOH . Q 6 HOH B 8 408 31 HOH HOH . Q 6 HOH B 9 409 30 HOH HOH . Q 6 HOH B 10 410 39 HOH HOH . Q 6 HOH B 11 411 6 HOH HOH . R 6 HOH C 1 401 25 HOH HOH . R 6 HOH C 2 402 33 HOH HOH . R 6 HOH C 3 403 37 HOH HOH . R 6 HOH C 4 404 12 HOH HOH . R 6 HOH C 5 405 27 HOH HOH . S 6 HOH D 1 401 19 HOH HOH . S 6 HOH D 2 402 34 HOH HOH . S 6 HOH D 3 403 17 HOH HOH . S 6 HOH D 4 404 9 HOH HOH . S 6 HOH D 5 405 23 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BME . . . G 3 -27.026 10.151 -36.097 1 69.28 ? C1 BME 303 A 1 HETATM 2 C C2 BME . . . G 3 -26.454 8.834 -35.703 1 57.11 ? C2 BME 303 A 1 HETATM 3 O O1 BME . . . G 3 -27.638 10.665 -34.929 1 65.65 ? O1 BME 303 A 1 HETATM 4 S S2 BME . . . G 3 -27.819 8.112 -34.795 1 65.01 ? S2 BME 303 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 4 #