data_6GX7
#
_model_server_result.job_id            EuRRrN879Jrb9yGTVa7DNQ 
_model_server_result.datetime_utc      '2024-11-05 09:22:32' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6gx7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"X","auth_seq_id":505}' 
#
_entry.id    6GX7 
#
_exptl.entry_id    6GX7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              150.173 
_entity.id                          10 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'TRIETHYLENE GLYCOL' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          101.49 
_cell.angle_gamma         90 
_cell.entry_id            6GX7 
_cell.length_a            148.06 
_cell.length_b            95.85 
_cell.length_c            158.06 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6GX7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA tetrameric 4 author_and_software_defined_assembly 1 
PISA tetrameric 4 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,G,I,J,K,L,M,N,O,P 1 1 
C,D,F,H,Q,R,S,T,U,V,W,X,Y,Z 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      10 
_struct_asym.id                             X 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE1 GLU 71 A GLU 71 1_555 J MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
metalc ? metalc2 I O2G GTP . A GTP 501 1_555 J MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.44 ? 
metalc ? metalc3 I O1B GTP . A GTP 501 1_555 J MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? 
metalc ? metalc4 L O2G GTP . B GTP 501 1_555 M MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.373 ? 
metalc ? metalc5 L O1B GTP . B GTP 501 1_555 M MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.881 ? 
metalc ? metalc6 C OE1 GLU 71 C GLU 71 1_555 R MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? 
metalc ? metalc7 C OE2 GLU 71 C GLU 71 1_555 R MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.809 ? 
metalc ? metalc8 Q O2G GTP . C GTP 501 1_555 R MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.932 ? 
metalc ? metalc9 Q O1B GTP . C GTP 501 1_555 R MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? 
metalc ? metalc10 T O3G GTP . D GTP 501 1_555 U MG MG . D MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? 
#
_chem_comp.formula           'C6 H14 O4' 
_chem_comp.formula_weight    150.173 
_chem_comp.id                PGE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'TRIETHYLENE GLYCOL' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PGE sing 323 n n 
C1 C2 PGE sing 324 n n 
C1 H1 PGE sing 325 n n 
C1 H12 PGE sing 326 n n 
O1 HO1 PGE sing 327 n n 
C2 O2 PGE sing 328 n n 
C2 H2 PGE sing 329 n n 
C2 H22 PGE sing 330 n n 
O2 C3 PGE sing 331 n n 
C3 C4 PGE sing 332 n n 
C3 H3 PGE sing 333 n n 
C3 H32 PGE sing 334 n n 
C4 O3 PGE sing 335 n n 
C4 H4 PGE sing 336 n n 
C4 H42 PGE sing 337 n n 
O4 C6 PGE sing 338 n n 
O4 HO4 PGE sing 339 n n 
C6 C5 PGE sing 340 n n 
C6 H6 PGE sing 341 n n 
C6 H62 PGE sing 342 n n 
C5 O3 PGE sing 343 n n 
C5 H5 PGE sing 344 n n 
C5 H52 PGE sing 345 n n 
#
_atom_sites.entry_id                     6GX7 
_atom_sites.fract_transf_matrix[1][1]    0.006754 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001373 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010433 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006456 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 5 GTP A 1 501 501 GTP GTP . 
J 6 MG A 1 502 502 MG MG . 
K 7 SO4 A 1 503 507 SO4 SO4 . 
L 5 GTP B 1 501 501 GTP GTP . 
M 6 MG B 1 502 502 MG MG . 
N 8 MES B 1 503 507 MES MES . 
O 8 MES B 1 504 508 MES MES . 
P 9 GOL B 1 505 601 GOL GOL . 
Q 5 GTP C 1 501 501 GTP GTP . 
R 6 MG C 1 502 502 MG MG . 
S 7 SO4 C 1 503 507 SO4 SO4 . 
T 5 GTP D 1 501 501 GTP GTP . 
U 6 MG D 1 502 502 MG MG . 
V 8 MES D 1 503 507 MES MES . 
W 8 MES D 1 504 508 MES MES . 
X 10 PGE D 1 505 509 PGE PGE . 
Y 9 GOL D 1 506 601 GOL GOL . 
Z 9 GOL D 1 507 701 GOL GOL . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PGE . . . X 10 -13.572 4.666 37.034 1 132.89 ? C1 PGE 505 D 1 
HETATM 2 O O1 PGE . . . X 10 -14.032 3.324 37.055 1 129.84 ? O1 PGE 505 D 1 
HETATM 3 C C2 PGE . . . X 10 -12.207 4.773 36.413 1 133.7 ? C2 PGE 505 D 1 
HETATM 4 O O2 PGE . . . X 10 -11.855 6.136 36.197 1 136.98 ? O2 PGE 505 D 1 
HETATM 5 C C3 PGE . . . X 10 -10.683 6.312 35.403 1 136.99 ? C3 PGE 505 D 1 
HETATM 6 C C4 PGE . . . X 10 -10.355 7.776 35.285 1 140.77 ? C4 PGE 505 D 1 
HETATM 7 O O4 PGE . . . X 10 -6.873 10.893 34.677 1 138.29 ? O4 PGE 505 D 1 
HETATM 8 C C6 PGE . . . X 10 -7.269 9.537 34.515 1 138.49 ? C6 PGE 505 D 1 
HETATM 9 C C5 PGE . . . X 10 -8.765 9.385 34.554 1 140.81 ? C5 PGE 505 D 1 
HETATM 10 O O3 PGE . . . X 10 -9.131 8.006 34.589 1 140.41 ? O3 PGE 505 D 1 
#
_model_server_stats.io_time_ms              37 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    30 
_model_server_stats.query_time_ms           232 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           10 
#