data_6GYR # _model_server_result.job_id cRdsD_H5KLXYJGyzpCwLcw _model_server_result.datetime_utc '2024-11-23 12:05:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6gyr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":1705}' # _entry.id 6GYR # _exptl.entry_id 6GYR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 14 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 91.75 _cell.angle_gamma 90 _cell.entry_id 6GYR _cell.length_a 100.826 _cell.length_b 146.717 _cell.length_c 116.477 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6GYR _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,G,H,I 1 1 C,O,P,Q,R 1 2 B,D,J,K,L,M,N,S,T,U,V 2 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 1_655 x+1,y,z 1 0 0 0 1 0 0 0 1 100.826 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 N N N ? 2 O N N ? 2 P N N ? 2 Q N N ? 2 S N N ? 2 T N N ? 2 U N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 119 A CYS 1163 1_555 E ZN ZN . A ZN 1701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? metalc ? metalc2 A SG CYS 120 A CYS 1164 1_555 E ZN ZN . A ZN 1701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? metalc ? metalc3 A SG CYS 133 A CYS 1177 1_555 G ZN ZN . A ZN 1703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.908 ? metalc ? metalc4 A SG CYS 139 A CYS 1183 1_555 G ZN ZN . A ZN 1703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? metalc ? metalc5 A SG CYS 157 A CYS 1201 1_555 G ZN ZN . A ZN 1703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.959 ? metalc ? metalc6 A SG CYS 203 A CYS 1247 1_555 F ZN ZN . A ZN 1702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc7 A SG CYS 206 A CYS 1250 1_555 F ZN ZN . A ZN 1702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? metalc ? metalc8 A ND1 HIS 211 A HIS 1255 1_555 E ZN ZN . A ZN 1701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? metalc ? metalc9 A SG CYS 214 A CYS 1258 1_555 E ZN ZN . A ZN 1701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.474 ? metalc ? metalc10 A SG CYS 228 A CYS 1272 1_555 F ZN ZN . A ZN 1702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? metalc ? metalc11 A SG CYS 231 A CYS 1275 1_555 F ZN ZN . A ZN 1702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.616 ? metalc ? metalc12 A NE2 HIS 271 A HIS 1315 1_555 I ZN ZN . A ZN 1705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? metalc ? metalc13 A SG CYS 364 A CYS 1408 1_555 I ZN ZN . A ZN 1705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc14 I ZN ZN . A ZN 1705 1_455 C NE2 HIS 271 C HIS 1315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.981 ? metalc ? metalc15 I ZN ZN . A ZN 1705 1_455 C SG CYS 364 C CYS 1408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? metalc ? metalc16 B SG CYS 119 B CYS 1163 1_555 J ZN ZN . B ZN 1701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? metalc ? metalc17 B SG CYS 120 B CYS 1164 1_555 J ZN ZN . B ZN 1701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? metalc ? metalc18 B SG CYS 139 B CYS 1183 1_555 L ZN ZN . B ZN 1703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? metalc ? metalc19 B SG CYS 157 B CYS 1201 1_555 L ZN ZN . B ZN 1703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.455 ? metalc ? metalc20 B SG CYS 203 B CYS 1247 1_555 K ZN ZN . B ZN 1702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.502 ? metalc ? metalc21 B SG CYS 206 B CYS 1250 1_555 K ZN ZN . B ZN 1702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.447 ? metalc ? metalc22 B ND1 HIS 211 B HIS 1255 1_555 J ZN ZN . B ZN 1701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? metalc ? metalc23 B SG CYS 214 B CYS 1258 1_555 J ZN ZN . B ZN 1701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.595 ? metalc ? metalc24 B SG CYS 228 B CYS 1272 1_555 K ZN ZN . B ZN 1702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.381 ? metalc ? metalc25 B SG CYS 231 B CYS 1275 1_555 K ZN ZN . B ZN 1702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? metalc ? metalc26 B NE2 HIS 271 B HIS 1315 1_555 N ZN ZN . B ZN 1705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? metalc ? metalc27 B SG CYS 364 B CYS 1408 1_555 N ZN ZN . B ZN 1705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? metalc ? metalc28 N ZN ZN . B ZN 1705 1_555 D NE2 HIS 271 D HIS 1315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc29 N ZN ZN . B ZN 1705 1_555 D SG CYS 364 D CYS 1408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.46 ? metalc ? metalc30 C SG CYS 119 C CYS 1163 1_555 O ZN ZN . C ZN 1701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc31 C SG CYS 120 C CYS 1164 1_555 O ZN ZN . C ZN 1701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? metalc ? metalc32 C SG CYS 203 C CYS 1247 1_555 P ZN ZN . C ZN 1702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.681 ? metalc ? metalc33 C SG CYS 206 C CYS 1250 1_555 P ZN ZN . C ZN 1702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.447 ? metalc ? metalc34 C SG CYS 228 C CYS 1272 1_555 P ZN ZN . C ZN 1702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? metalc ? metalc35 C SG CYS 231 C CYS 1275 1_555 P ZN ZN . C ZN 1702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? metalc ? metalc36 D SG CYS 119 D CYS 1163 1_555 S ZN ZN . D ZN 1701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? metalc ? metalc37 D SG CYS 120 D CYS 1164 1_555 S ZN ZN . D ZN 1701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.635 ? metalc ? metalc38 D SG CYS 139 D CYS 1183 1_555 U ZN ZN . D ZN 1703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.973 ? metalc ? metalc39 D SG CYS 157 D CYS 1201 1_555 U ZN ZN . D ZN 1703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.645 ? metalc ? metalc40 D SG CYS 160 D CYS 1204 1_555 U ZN ZN . D ZN 1703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? metalc ? metalc41 D SG CYS 203 D CYS 1247 1_555 T ZN ZN . D ZN 1702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.517 ? metalc ? metalc42 D ND1 HIS 211 D HIS 1255 1_555 S ZN ZN . D ZN 1701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? metalc ? metalc43 D SG CYS 214 D CYS 1258 1_555 S ZN ZN . D ZN 1701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.767 ? metalc ? metalc44 D SG CYS 228 D CYS 1272 1_555 T ZN ZN . D ZN 1702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.856 ? metalc ? metalc45 D SG CYS 231 D CYS 1275 1_555 T ZN ZN . D ZN 1702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.582 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6GYR _atom_sites.fract_transf_matrix[1][1] 0.009918 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000302 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006816 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008589 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 ZN A 1 1701 1 ZN ZN . F 2 ZN A 1 1702 2 ZN ZN . G 2 ZN A 1 1703 3 ZN ZN . H 3 01K A 1 1704 700 01K 01K . I 2 ZN A 1 1705 2 ZN ZN . J 2 ZN B 1 1701 1 ZN ZN . K 2 ZN B 1 1702 2 ZN ZN . L 2 ZN B 1 1703 3 ZN ZN . M 3 01K B 1 1704 700 01K 01K . N 2 ZN B 1 1705 1 ZN ZN . O 2 ZN C 1 1701 1 ZN ZN . P 2 ZN C 1 1702 2 ZN ZN . Q 2 ZN C 1 1703 3 ZN ZN . R 3 01K C 1 1704 700 01K 01K . S 2 ZN D 1 1701 1 ZN ZN . T 2 ZN D 1 1702 2 ZN ZN . U 2 ZN D 1 1703 3 ZN ZN . V 3 01K D 1 1704 700 01K 01K . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 2 _atom_site.Cartn_x 64.718 _atom_site.Cartn_y -15.567 _atom_site.Cartn_z 22.876 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 78.63 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 1705 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 88 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 1 #