data_6GZ9 # _model_server_result.job_id rxd0L6iTJTGiS32uwm7Khg _model_server_result.datetime_utc '2024-11-04 22:15:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6gz9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 6GZ9 # _exptl.entry_id 6GZ9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 324.336 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-[(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)methoxy]ethyl L-valinate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.66 _cell.angle_gamma 90 _cell.entry_id 6GZ9 _cell.length_a 60.119 _cell.length_b 56.576 _cell.length_c 99.172 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6GZ9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C13 H20 N6 O4' _chem_comp.formula_weight 324.336 _chem_comp.id TXC _chem_comp.mon_nstd_flag . _chem_comp.name '2-[(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)methoxy]ethyl L-valinate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Valacyclovir # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CG2 CB TXC sing 334 n n CB CG1 TXC sing 335 n n CB CA TXC sing 336 n n CA N TXC sing 337 n n CA C TXC sing 338 n n C O TXC doub 339 n n C OAO TXC sing 340 n n OAO CAI TXC sing 341 n n CAI CAH TXC sing 342 n n CAH OAN TXC sing 343 n n OAN CAJ TXC sing 344 n n CAJ N9 TXC sing 345 n n N9 C8 TXC sing 346 n y N9 C4 TXC sing 347 n y C8 N7 TXC doub 348 n y N7 C5 TXC sing 349 n y C5 C4 TXC doub 350 n y C5 C6 TXC sing 351 n n C4 N3 TXC sing 352 n n N3 C2 TXC doub 353 n n C2 N2 TXC sing 354 n n C2 N1 TXC sing 355 n n N1 C6 TXC sing 356 n n C6 O6 TXC doub 357 n n CG2 HG21 TXC sing 358 n n CG2 HG22 TXC sing 359 n n CG2 HG23 TXC sing 360 n n CB HB TXC sing 361 n n CG1 HG11 TXC sing 362 n n CG1 HG12 TXC sing 363 n n CG1 HG13 TXC sing 364 n n CA HA TXC sing 365 n n N HN1 TXC sing 366 n n N HN2 TXC sing 367 n n CAI HAI1 TXC sing 368 n n CAI HAI2 TXC sing 369 n n CAH HAH1 TXC sing 370 n n CAH HAH2 TXC sing 371 n n CAJ HAJ1 TXC sing 372 n n CAJ HAJ2 TXC sing 373 n n C8 H8 TXC sing 374 n n N2 H21N TXC sing 375 n n N2 H22N TXC sing 376 n n N1 H1 TXC sing 377 n n # _atom_sites.entry_id 6GZ9 _atom_sites.fract_transf_matrix[1][1] 0.016634 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004351 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017675 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010423 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TXC A 1 501 1 TXC VCL . C 3 HOH A 1 601 6 HOH HOH . C 3 HOH A 2 602 1 HOH HOH . C 3 HOH A 3 603 2 HOH HOH . C 3 HOH A 4 604 5 HOH HOH . C 3 HOH A 5 605 3 HOH HOH . C 3 HOH A 6 606 4 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CG2 TXC . . . B 2 5.114 4.197 -15.155 1 72.11 ? CG2 TXC 501 A 1 HETATM 2 C CB TXC . . . B 2 3.739 3.535 -15.224 1 72.31 ? CB TXC 501 A 1 HETATM 3 C CG1 TXC . . . B 2 3.314 3.079 -13.844 1 72.61 ? CG1 TXC 501 A 1 HETATM 4 C CA TXC . . . B 2 2.631 4.383 -15.891 1 81.4 ? CA TXC 501 A 1 HETATM 5 N N TXC . . . B 2 2.339 5.696 -15.323 1 76.76 ? N TXC 501 A 1 HETATM 6 C C TXC . . . B 2 1.23 3.653 -15.949 1 81.71 ? C TXC 501 A 1 HETATM 7 O O TXC . . . B 2 0.415 3.669 -15.065 1 76.54 ? O TXC 501 A 1 HETATM 8 O OAO TXC . . . B 2 1.04 3.059 -17.134 1 89.66 ? OAO TXC 501 A 1 HETATM 9 C CAI TXC . . . B 2 -0.262 2.456 -17.365 1 79.13 ? CAI TXC 501 A 1 HETATM 10 C CAH TXC . . . B 2 -0.182 1.481 -18.509 1 75.09 ? CAH TXC 501 A 1 HETATM 11 O OAN TXC . . . B 2 -0.754 2.007 -19.694 1 75.58 ? OAN TXC 501 A 1 HETATM 12 C CAJ TXC . . . B 2 -2.029 1.499 -19.971 1 84.65 ? CAJ TXC 501 A 1 HETATM 13 N N9 TXC . . . B 2 -3.089 2.339 -19.405 1 96.95 ? N9 TXC 501 A 1 HETATM 14 C C8 TXC . . . B 2 -3.198 2.76 -18.115 1 90.06 ? C8 TXC 501 A 1 HETATM 15 N N7 TXC . . . B 2 -4.19 3.594 -17.917 1 89.47 ? N7 TXC 501 A 1 HETATM 16 C C5 TXC . . . B 2 -4.785 3.716 -19.165 1 91.56 ? C5 TXC 501 A 1 HETATM 17 C C4 TXC . . . B 2 -4.124 2.937 -20.076 1 91.42 ? C4 TXC 501 A 1 HETATM 18 N N3 TXC . . . B 2 -4.529 2.8 -21.385 1 90.39 ? N3 TXC 501 A 1 HETATM 19 C C2 TXC . . . B 2 -5.658 3.487 -21.744 1 90.18 ? C2 TXC 501 A 1 HETATM 20 N N2 TXC . . . B 2 -6.13 3.27 -22.97 1 80.05 ? N2 TXC 501 A 1 HETATM 21 N N1 TXC . . . B 2 -6.323 4.287 -20.912 1 97.65 ? N1 TXC 501 A 1 HETATM 22 C C6 TXC . . . B 2 -5.957 4.472 -19.588 1 97.97 ? C6 TXC 501 A 1 HETATM 23 O O6 TXC . . . B 2 -6.582 5.235 -18.837 1 97.22 ? O6 TXC 501 A 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 23 #