data_6H0M # _model_server_result.job_id lEFr0VQ_blf7RhpvETumqQ _model_server_result.datetime_utc '2024-11-15 00:14:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6h0m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 6H0M # _exptl.entry_id 6H0M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6H0M _cell.length_a 91.59 _cell.length_b 91.59 _cell.length_c 131.112 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6H0M _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 0 91.59 0 3 'crystal symmetry operation' 5_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 4 'crystal symmetry operation' 6_565 x,-y+1,-z 1 0 0 0 -1 0 0 0 -1 0 91.59 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 255 A CYS 255 1_555 A SG CYS 255 A CYS 255 5_555 ? A ? ? A ? ? ? ? ? ? ? 2.795 ? metalc ? metalc1 A O GLU 50 A GLU 50 1_555 B NA NA . A NA 301 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc2 A O GLU 50 A GLU 50 1_555 B NA NA . A NA 301 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.369 ? metalc ? metalc3 A O LEU 53 A LEU 53 1_555 B NA NA . A NA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? metalc ? metalc4 A O ALA 56 A ALA 56 1_555 B NA NA . A NA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? metalc ? metalc5 B NA NA . A NA 301 1_555 F O HOH . A HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.476 ? metalc ? metalc6 B NA NA . A NA 301 1_555 F O HOH . A HOH 551 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.779 ? metalc ? metalc7 B NA NA . A NA 301 1_555 F O HOH . A HOH 565 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6H0M _atom_sites.fract_transf_matrix[1][1] 0.010918 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010918 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007627 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 301 1 NA NA . C 3 NAD A 1 302 1 NAD NAD . D 4 DMS A 1 303 2 DMS DMS . E 5 BGC A 1 304 1 BGC XXX . F 6 HOH A 1 401 235 HOH HOH . F 6 HOH A 2 402 149 HOH HOH . F 6 HOH A 3 403 239 HOH HOH . F 6 HOH A 4 404 176 HOH HOH . F 6 HOH A 5 405 238 HOH HOH . F 6 HOH A 6 406 188 HOH HOH . F 6 HOH A 7 407 69 HOH HOH . F 6 HOH A 8 408 166 HOH HOH . F 6 HOH A 9 409 68 HOH HOH . F 6 HOH A 10 410 52 HOH HOH . F 6 HOH A 11 411 168 HOH HOH . F 6 HOH A 12 412 64 HOH HOH . F 6 HOH A 13 413 57 HOH HOH . F 6 HOH A 14 414 174 HOH HOH . F 6 HOH A 15 415 218 HOH HOH . F 6 HOH A 16 416 12 HOH HOH . F 6 HOH A 17 417 59 HOH HOH . F 6 HOH A 18 418 2 HOH HOH . F 6 HOH A 19 419 103 HOH HOH . F 6 HOH A 20 420 20 HOH HOH . F 6 HOH A 21 421 226 HOH HOH . F 6 HOH A 22 422 128 HOH HOH . F 6 HOH A 23 423 6 HOH HOH . F 6 HOH A 24 424 8 HOH HOH . F 6 HOH A 25 425 51 HOH HOH . F 6 HOH A 26 426 45 HOH HOH . F 6 HOH A 27 427 96 HOH HOH . F 6 HOH A 28 428 19 HOH HOH . F 6 HOH A 29 429 28 HOH HOH . F 6 HOH A 30 430 126 HOH HOH . F 6 HOH A 31 431 83 HOH HOH . F 6 HOH A 32 432 211 HOH HOH . F 6 HOH A 33 433 53 HOH HOH . F 6 HOH A 34 434 36 HOH HOH . F 6 HOH A 35 435 71 HOH HOH . F 6 HOH A 36 436 23 HOH HOH . F 6 HOH A 37 437 159 HOH HOH . F 6 HOH A 38 438 79 HOH HOH . F 6 HOH A 39 439 33 HOH HOH . F 6 HOH A 40 440 224 HOH HOH . F 6 HOH A 41 441 236 HOH HOH . F 6 HOH A 42 442 4 HOH HOH . F 6 HOH A 43 443 43 HOH HOH . F 6 HOH A 44 444 137 HOH HOH . F 6 HOH A 45 445 155 HOH HOH . F 6 HOH A 46 446 86 HOH HOH . F 6 HOH A 47 447 46 HOH HOH . F 6 HOH A 48 448 104 HOH HOH . F 6 HOH A 49 449 91 HOH HOH . F 6 HOH A 50 450 47 HOH HOH . F 6 HOH A 51 451 154 HOH HOH . F 6 HOH A 52 452 1 HOH HOH . F 6 HOH A 53 453 184 HOH HOH . F 6 HOH A 54 454 158 HOH HOH . F 6 HOH A 55 455 30 HOH HOH . F 6 HOH A 56 456 82 HOH HOH . F 6 HOH A 57 457 10 HOH HOH . F 6 HOH A 58 458 107 HOH HOH . F 6 HOH A 59 459 87 HOH HOH . F 6 HOH A 60 460 130 HOH HOH . F 6 HOH A 61 461 55 HOH HOH . F 6 HOH A 62 462 143 HOH HOH . F 6 HOH A 63 463 58 HOH HOH . F 6 HOH A 64 464 29 HOH HOH . F 6 HOH A 65 465 67 HOH HOH . F 6 HOH A 66 466 73 HOH HOH . F 6 HOH A 67 467 62 HOH HOH . F 6 HOH A 68 468 14 HOH HOH . F 6 HOH A 69 469 18 HOH HOH . F 6 HOH A 70 470 44 HOH HOH . F 6 HOH A 71 471 214 HOH HOH . F 6 HOH A 72 472 50 HOH HOH . F 6 HOH A 73 473 193 HOH HOH . F 6 HOH A 74 474 192 HOH HOH . F 6 HOH A 75 475 93 HOH HOH . F 6 HOH A 76 476 5 HOH HOH . F 6 HOH A 77 477 100 HOH HOH . F 6 HOH A 78 478 221 HOH HOH . F 6 HOH A 79 479 119 HOH HOH . F 6 HOH A 80 480 106 HOH HOH . F 6 HOH A 81 481 180 HOH HOH . F 6 HOH A 82 482 60 HOH HOH . F 6 HOH A 83 483 142 HOH HOH . F 6 HOH A 84 484 88 HOH HOH . F 6 HOH A 85 485 76 HOH HOH . F 6 HOH A 86 486 97 HOH HOH . F 6 HOH A 87 487 65 HOH HOH . F 6 HOH A 88 488 117 HOH HOH . F 6 HOH A 89 489 101 HOH HOH . F 6 HOH A 90 490 78 HOH HOH . F 6 HOH A 91 491 135 HOH HOH . F 6 HOH A 92 492 112 HOH HOH . F 6 HOH A 93 493 195 HOH HOH . F 6 HOH A 94 494 27 HOH HOH . F 6 HOH A 95 495 34 HOH HOH . F 6 HOH A 96 496 140 HOH HOH . F 6 HOH A 97 497 40 HOH HOH . F 6 HOH A 98 498 15 HOH HOH . F 6 HOH A 99 499 72 HOH HOH . F 6 HOH A 100 500 150 HOH HOH . F 6 HOH A 101 501 3 HOH HOH . F 6 HOH A 102 502 202 HOH HOH . F 6 HOH A 103 503 75 HOH HOH . F 6 HOH A 104 504 13 HOH HOH . F 6 HOH A 105 505 124 HOH HOH . F 6 HOH A 106 506 7 HOH HOH . F 6 HOH A 107 507 167 HOH HOH . F 6 HOH A 108 508 74 HOH HOH . F 6 HOH A 109 509 89 HOH HOH . F 6 HOH A 110 510 127 HOH HOH . F 6 HOH A 111 511 37 HOH HOH . F 6 HOH A 112 512 109 HOH HOH . F 6 HOH A 113 513 182 HOH HOH . F 6 HOH A 114 514 111 HOH HOH . F 6 HOH A 115 515 217 HOH HOH . F 6 HOH A 116 516 49 HOH HOH . F 6 HOH A 117 517 125 HOH HOH . F 6 HOH A 118 518 38 HOH HOH . F 6 HOH A 119 519 210 HOH HOH . F 6 HOH A 120 520 129 HOH HOH . F 6 HOH A 121 521 9 HOH HOH . F 6 HOH A 122 522 179 HOH HOH . F 6 HOH A 123 523 237 HOH HOH . F 6 HOH A 124 524 170 HOH HOH . F 6 HOH A 125 525 31 HOH HOH . F 6 HOH A 126 526 26 HOH HOH . F 6 HOH A 127 527 169 HOH HOH . F 6 HOH A 128 528 84 HOH HOH . F 6 HOH A 129 529 42 HOH HOH . F 6 HOH A 130 530 32 HOH HOH . F 6 HOH A 131 531 25 HOH HOH . F 6 HOH A 132 532 21 HOH HOH . F 6 HOH A 133 533 24 HOH HOH . F 6 HOH A 134 534 41 HOH HOH . F 6 HOH A 135 535 177 HOH HOH . F 6 HOH A 136 536 95 HOH HOH . F 6 HOH A 137 537 141 HOH HOH . F 6 HOH A 138 538 48 HOH HOH . F 6 HOH A 139 539 77 HOH HOH . F 6 HOH A 140 540 172 HOH HOH . F 6 HOH A 141 541 233 HOH HOH . F 6 HOH A 142 542 98 HOH HOH . F 6 HOH A 143 543 136 HOH HOH . F 6 HOH A 144 544 189 HOH HOH . F 6 HOH A 145 545 163 HOH HOH . F 6 HOH A 146 546 191 HOH HOH . F 6 HOH A 147 547 39 HOH HOH . F 6 HOH A 148 548 115 HOH HOH . F 6 HOH A 149 549 70 HOH HOH . F 6 HOH A 150 550 161 HOH HOH . F 6 HOH A 151 551 120 HOH HOH . F 6 HOH A 152 552 231 HOH HOH . F 6 HOH A 153 553 56 HOH HOH . F 6 HOH A 154 554 215 HOH HOH . F 6 HOH A 155 555 63 HOH HOH . F 6 HOH A 156 556 123 HOH HOH . F 6 HOH A 157 557 201 HOH HOH . F 6 HOH A 158 558 203 HOH HOH . F 6 HOH A 159 559 213 HOH HOH . F 6 HOH A 160 560 16 HOH HOH . F 6 HOH A 161 561 156 HOH HOH . F 6 HOH A 162 562 11 HOH HOH . F 6 HOH A 163 563 229 HOH HOH . F 6 HOH A 164 564 17 HOH HOH . F 6 HOH A 165 565 108 HOH HOH . F 6 HOH A 166 566 116 HOH HOH . F 6 HOH A 167 567 122 HOH HOH . F 6 HOH A 168 568 196 HOH HOH . F 6 HOH A 169 569 118 HOH HOH . F 6 HOH A 170 570 194 HOH HOH . F 6 HOH A 171 571 22 HOH HOH . F 6 HOH A 172 572 190 HOH HOH . F 6 HOH A 173 573 81 HOH HOH . F 6 HOH A 174 574 139 HOH HOH . F 6 HOH A 175 575 152 HOH HOH . F 6 HOH A 176 576 92 HOH HOH . F 6 HOH A 177 577 99 HOH HOH . F 6 HOH A 178 578 175 HOH HOH . F 6 HOH A 179 579 35 HOH HOH . F 6 HOH A 180 580 216 HOH HOH . F 6 HOH A 181 581 131 HOH HOH . F 6 HOH A 182 582 94 HOH HOH . F 6 HOH A 183 583 134 HOH HOH . F 6 HOH A 184 584 80 HOH HOH . F 6 HOH A 185 585 138 HOH HOH . F 6 HOH A 186 586 121 HOH HOH . F 6 HOH A 187 587 151 HOH HOH . F 6 HOH A 188 588 198 HOH HOH . F 6 HOH A 189 589 132 HOH HOH . F 6 HOH A 190 590 102 HOH HOH . F 6 HOH A 191 591 114 HOH HOH . F 6 HOH A 192 592 144 HOH HOH . F 6 HOH A 193 593 133 HOH HOH . F 6 HOH A 194 594 61 HOH HOH . F 6 HOH A 195 595 197 HOH HOH . F 6 HOH A 196 596 228 HOH HOH . F 6 HOH A 197 597 105 HOH HOH . F 6 HOH A 198 598 212 HOH HOH . F 6 HOH A 199 599 185 HOH HOH . F 6 HOH A 200 600 186 HOH HOH . F 6 HOH A 201 601 66 HOH HOH . F 6 HOH A 202 602 165 HOH HOH . F 6 HOH A 203 603 171 HOH HOH . F 6 HOH A 204 604 178 HOH HOH . F 6 HOH A 205 605 90 HOH HOH . F 6 HOH A 206 606 206 HOH HOH . F 6 HOH A 207 607 181 HOH HOH . F 6 HOH A 208 608 157 HOH HOH . F 6 HOH A 209 609 204 HOH HOH . F 6 HOH A 210 610 173 HOH HOH . F 6 HOH A 211 611 187 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -35.063 _atom_site.Cartn_y 40.949 _atom_site.Cartn_z -20.674 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 15.54 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #