data_6H23 # _model_server_result.job_id IitudrLyvZishocz0MM0hw _model_server_result.datetime_utc '2024-11-22 22:46:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6h23 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"DA","auth_seq_id":301}' # _entry.id 6H23 # _exptl.entry_id 6H23 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 389.765 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}-(1,3-benzodioxol-5-ylmethyl)-5-[(2-chloranyl-4-fluoranyl-phenyl)methyl]-1,3,4-oxadiazole-2-carboxamide _entity.pdbx_number_of_molecules 14 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.53 _cell.angle_gamma 90 _cell.entry_id 6H23 _cell.length_a 115.504 _cell.length_b 97.153 _cell.length_c 127.249 _cell.Z_PDB 28 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6H23 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetradecameric _pdbx_struct_assembly.oligomeric_count 14 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 O N N ? 2 Q N N ? 2 R N N ? 2 S N N ? 2 T N N ? 2 V N N ? 2 X N N ? 2 Y N N ? 2 Z N N ? 2 AA N N ? 2 BA N N ? 2 CA N N ? 2 DA N N ? 2 EA N N # _chem_comp.formula 'C18 H13 Cl F N3 O4' _chem_comp.formula_weight 389.765 _chem_comp.id FJT _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}-(1,3-benzodioxol-5-ylmethyl)-5-[(2-chloranyl-4-fluoranyl-phenyl)methyl]-1,3,4-oxadiazole-2-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C26 O25 FJT sing 92 n n C26 O27 FJT sing 93 n n O25 C02 FJT sing 94 n n O27 C01 FJT sing 95 n n C02 C01 FJT doub 96 n y C02 C03 FJT sing 97 n y F22 C19 FJT sing 98 n n C01 C06 FJT sing 99 n y C03 C04 FJT doub 100 n y C19 C18 FJT doub 101 n y C19 C20 FJT sing 102 n y C18 C17 FJT sing 103 n y C06 C05 FJT doub 104 n y C20 C21 FJT doub 105 n y C04 C05 FJT sing 106 n y C05 C07 FJT sing 107 n n C17 CL1 FJT sing 108 n n C17 C16 FJT doub 109 n y C21 C16 FJT sing 110 n y C16 C15 FJT sing 111 n n O24 C09 FJT doub 112 n n C07 N08 FJT sing 113 n n C09 N08 FJT sing 114 n n C09 C10 FJT sing 115 n n C10 O14 FJT sing 116 n y C10 N11 FJT doub 117 n y O14 C13 FJT sing 118 n y N11 N12 FJT sing 119 n y C13 N12 FJT doub 120 n y C13 C15 FJT sing 121 n n C03 H1 FJT sing 122 n n C04 H2 FJT sing 123 n n C06 H3 FJT sing 124 n n C07 H4 FJT sing 125 n n C07 H5 FJT sing 126 n n C15 H6 FJT sing 127 n n C15 H7 FJT sing 128 n n C18 H8 FJT sing 129 n n C20 H9 FJT sing 130 n n C21 H10 FJT sing 131 n n C26 H11 FJT sing 132 n n C26 H12 FJT sing 133 n n N08 H13 FJT sing 134 n n # _atom_sites.entry_id 6H23 _atom_sites.fract_transf_matrix[1][1] 0.008658 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000534 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010293 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007874 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code O 2 FJT A 1 301 10 FJT D9 . P 3 EDO A 1 302 1 EDO EDO . Q 2 FJT B 1 301 12 FJT D9 . R 2 FJT D 1 301 9 FJT D9 . S 2 FJT D 1 302 13 FJT D9 . T 2 FJT E 1 301 4 FJT D9 . U 3 EDO E 1 302 2 EDO EDO . V 2 FJT F 1 301 5 FJT D9 . W 3 EDO F 1 302 3 EDO EDO . X 2 FJT G 1 301 7 FJT D9 . Y 2 FJT H 1 301 11 FJT D9 . Z 2 FJT H 1 302 14 FJT D9 . AA 2 FJT J 1 301 2 FJT D9 . BA 2 FJT K 1 301 6 FJT D9 . CA 2 FJT L 1 301 8 FJT D9 . DA 2 FJT M 1 301 1 FJT D9 . EA 2 FJT M 1 302 3 FJT D9 . FA 3 EDO N 1 301 5 EDO EDO . GA 4 HOH D 1 401 3 HOH HOH . HA 4 HOH E 1 401 15 HOH HOH . HA 4 HOH E 2 402 18 HOH HOH . IA 4 HOH F 1 401 13 HOH HOH . IA 4 HOH F 2 402 4 HOH HOH . JA 4 HOH G 1 401 6 HOH HOH . JA 4 HOH G 2 402 12 HOH HOH . KA 4 HOH H 1 401 10 HOH HOH . LA 4 HOH I 1 301 16 HOH HOH . MA 4 HOH K 1 401 11 HOH HOH . NA 4 HOH N 1 401 9 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 FJT . A . DA 2 215.042 20.288 135.002 0.38 68.85 ? C01 FJT 301 M 1 HETATM 2 C C01 FJT . B . DA 2 214.89 20.579 134.797 0.45 68.41 ? C01 FJT 301 M 1 HETATM 3 C C02 FJT . A . DA 2 215.918 19.726 134.117 0.38 69.99 ? C02 FJT 301 M 1 HETATM 4 C C02 FJT . B . DA 2 215.937 19.93 134.204 0.45 69.95 ? C02 FJT 301 M 1 HETATM 5 C C03 FJT . A . DA 2 216.812 20.547 133.384 0.38 68.82 ? C03 FJT 301 M 1 HETATM 6 C C03 FJT . B . DA 2 216.904 20.665 133.477 0.45 68.78 ? C03 FJT 301 M 1 HETATM 7 C C04 FJT . A . DA 2 216.794 21.924 133.569 0.38 67.98 ? C04 FJT 301 M 1 HETATM 8 C C04 FJT . B . DA 2 216.793 22.044 133.379 0.45 67.83 ? C04 FJT 301 M 1 HETATM 9 C C05 FJT . A . DA 2 215.902 22.493 134.476 0.38 67.86 ? C05 FJT 301 M 1 HETATM 10 C C05 FJT . B . DA 2 215.726 22.707 133.977 0.45 67.61 ? C05 FJT 301 M 1 HETATM 11 C C06 FJT . A . DA 2 215.024 21.691 135.19 0.38 67.43 ? C06 FJT 301 M 1 HETATM 12 C C06 FJT . B . DA 2 214.773 21.989 134.688 0.45 67.99 ? C06 FJT 301 M 1 HETATM 13 C C07 FJT . A . DA 2 215.878 24.001 134.677 0.38 67.84 ? C07 FJT 301 M 1 HETATM 14 C C07 FJT . B . DA 2 215.619 24.222 133.843 0.45 67.11 ? C07 FJT 301 M 1 HETATM 15 C C09 FJT . A . DA 2 213.821 25.437 134.103 0.38 68.42 ? C09 FJT 301 M 1 HETATM 16 C C09 FJT . B . DA 2 214.889 25.701 135.712 0.45 71.47 ? C09 FJT 301 M 1 HETATM 17 C C10 FJT . A . DA 2 213.49 25.845 135.545 0.38 71.46 ? C10 FJT 301 M 1 HETATM 18 C C10 FJT . B . DA 2 213.811 26.296 136.617 0.45 73.61 ? C10 FJT 301 M 1 HETATM 19 C C13 FJT . A . DA 2 212.389 26.695 137.228 0.38 74.03 ? C13 FJT 301 M 1 HETATM 20 C C13 FJT . B . DA 2 211.912 27.039 137.39 0.45 74.41 ? C13 FJT 301 M 1 HETATM 21 C C15 FJT . A . DA 2 211.295 27.387 138.04 0.38 73.69 ? C15 FJT 301 M 1 HETATM 22 C C15 FJT . B . DA 2 210.442 27.454 137.521 0.45 74 ? C15 FJT 301 M 1 HETATM 23 C C16 FJT . A . DA 2 210.117 26.437 138.217 0.38 72.26 ? C16 FJT 301 M 1 HETATM 24 C C16 FJT . B . DA 2 209.466 26.338 137.906 0.45 71.83 ? C16 FJT 301 M 1 HETATM 25 C C17 FJT . A . DA 2 210.158 25.457 139.195 0.38 72.51 ? C17 FJT 301 M 1 HETATM 26 C C17 FJT . B . DA 2 209.628 25.529 139.03 0.45 72.27 ? C17 FJT 301 M 1 HETATM 27 C C18 FJT . A . DA 2 209.086 24.595 139.355 0.38 70.82 ? C18 FJT 301 M 1 HETATM 28 C C18 FJT . B . DA 2 208.691 24.55 139.315 0.45 70.14 ? C18 FJT 301 M 1 HETATM 29 C C19 FJT . A . DA 2 207.975 24.716 138.537 0.38 68.73 ? C19 FJT 301 M 1 HETATM 30 C C19 FJT . B . DA 2 207.588 24.374 138.5 0.45 68.21 ? C19 FJT 301 M 1 HETATM 31 C C20 FJT . A . DA 2 207.934 25.696 137.56 0.38 70.45 ? C20 FJT 301 M 1 HETATM 32 C C20 FJT . B . DA 2 207.417 25.18 137.39 0.45 69.91 ? C20 FJT 301 M 1 HETATM 33 C C21 FJT . A . DA 2 209.006 26.558 137.4 0.38 71.73 ? C21 FJT 301 M 1 HETATM 34 C C21 FJT . B . DA 2 208.352 26.16 137.1 0.45 71.09 ? C21 FJT 301 M 1 HETATM 35 C C26 FJT . A . DA 2 214.958 18.059 135.283 0.38 71.05 ? C26 FJT 301 M 1 HETATM 36 C C26 FJT . B . DA 2 214.807 18.407 135.429 0.45 71.23 ? C26 FJT 301 M 1 HETATM 37 F F22 FJT . A . DA 2 206.919 23.866 138.694 0.38 66.17 ? F22 FJT 301 M 1 HETATM 38 F F22 FJT . B . DA 2 206.671 23.407 138.794 0.45 64.68 ? F22 FJT 301 M 1 HETATM 39 N N08 FJT . A . DA 2 214.943 24.581 133.73 0.38 67.62 ? N08 FJT 301 M 1 HETATM 40 N N08 FJT . B . DA 2 214.549 24.749 134.67 0.45 66.63 ? N08 FJT 301 M 1 HETATM 41 N N11 FJT . A . DA 2 214.21 25.666 136.644 0.38 72.48 ? N11 FJT 301 M 1 HETATM 42 N N11 FJT . B . DA 2 214.013 26.709 137.855 0.45 72.06 ? N11 FJT 301 M 1 HETATM 43 N N12 FJT . A . DA 2 213.518 26.194 137.7 0.38 72.19 ? N12 FJT 301 M 1 HETATM 44 N N12 FJT . B . DA 2 212.826 27.179 138.336 0.45 72.79 ? N12 FJT 301 M 1 HETATM 45 O O14 FJT . A . DA 2 212.363 26.482 135.903 0.38 73.37 ? O14 FJT 301 M 1 HETATM 46 O O14 FJT . B . DA 2 212.514 26.498 136.314 0.45 75.27 ? O14 FJT 301 M 1 HETATM 47 O O24 FJT . A . DA 2 213.126 25.847 133.238 0.38 70.36 ? O24 FJT 301 M 1 HETATM 48 O O24 FJT . B . DA 2 216.018 26.02 135.867 0.45 73.29 ? O24 FJT 301 M 1 HETATM 49 O O25 FJT . A . DA 2 215.716 18.326 134.134 0.38 71.65 ? O25 FJT 301 M 1 HETATM 50 O O25 FJT . B . DA 2 215.813 18.545 134.464 0.45 73.11 ? O25 FJT 301 M 1 HETATM 51 O O27 FJT . A . DA 2 214.278 19.249 135.584 0.38 69.48 ? O27 FJT 301 M 1 HETATM 52 O O27 FJT . B . DA 2 214.084 19.611 135.444 0.45 69.49 ? O27 FJT 301 M 1 HETATM 53 CL CL1 FJT . A . DA 2 211.593 25.306 140.245 0.38 74.23 ? CL1 FJT 301 M 1 HETATM 54 CL CL1 FJT . B . DA 2 211.021 25.69 140.133 0.45 75.92 ? CL1 FJT 301 M 1 # _model_server_stats.io_time_ms 31 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 54 #