data_6H28 # _model_server_result.job_id dogEn-GejonyqFsvA3tN8Q _model_server_result.datetime_utc '2024-11-28 05:02:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6h28 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":402}' # _entry.id 6H28 # _exptl.entry_id 6H28 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 101.31 _cell.angle_beta 90.02 _cell.angle_gamma 90.05 _cell.entry_id 6H28 _cell.length_a 39.59 _cell.length_b 41.7 _cell.length_c 76.76 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6H28 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,H 1 1 B,E,F,G,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N ? 3 G N N # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 493 n n C1 C2 PEG sing 494 n n C1 H11 PEG sing 495 n n C1 H12 PEG sing 496 n n O1 HO1 PEG sing 497 n n C2 O2 PEG sing 498 n n C2 H21 PEG sing 499 n n C2 H22 PEG sing 500 n n O2 C3 PEG sing 501 n n C3 C4 PEG sing 502 n n C3 H31 PEG sing 503 n n C3 H32 PEG sing 504 n n C4 O4 PEG sing 505 n n C4 H41 PEG sing 506 n n C4 H42 PEG sing 507 n n O4 HO4 PEG sing 508 n n # _atom_sites.entry_id 6H28 _atom_sites.fract_transf_matrix[1][1] 0.025259 _atom_sites.fract_transf_matrix[1][2] 0.00002 _atom_sites.fract_transf_matrix[1][3] 0.000011 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023981 _atom_sites.fract_transf_matrix[2][3] 0.004794 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013285 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 15P A 1 401 1 15P 15P . D 3 PEG A 1 402 1 PEG PEG . E 4 GOL B 1 401 4 GOL GOL . F 3 PEG B 1 402 2 PEG PEG . G 3 PEG B 1 403 3 PEG PEG . H 5 HOH A 1 501 206 HOH HOH . H 5 HOH A 2 502 140 HOH HOH . H 5 HOH A 3 503 195 HOH HOH . H 5 HOH A 4 504 204 HOH HOH . H 5 HOH A 5 505 168 HOH HOH . H 5 HOH A 6 506 38 HOH HOH . H 5 HOH A 7 507 44 HOH HOH . H 5 HOH A 8 508 198 HOH HOH . H 5 HOH A 9 509 13 HOH HOH . H 5 HOH A 10 510 64 HOH HOH . H 5 HOH A 11 511 117 HOH HOH . H 5 HOH A 12 512 77 HOH HOH . H 5 HOH A 13 513 150 HOH HOH . H 5 HOH A 14 514 126 HOH HOH . H 5 HOH A 15 515 138 HOH HOH . H 5 HOH A 16 516 37 HOH HOH . H 5 HOH A 17 517 57 HOH HOH . H 5 HOH A 18 518 4 HOH HOH . H 5 HOH A 19 519 21 HOH HOH . H 5 HOH A 20 520 83 HOH HOH . H 5 HOH A 21 521 144 HOH HOH . H 5 HOH A 22 522 96 HOH HOH . H 5 HOH A 23 523 123 HOH HOH . H 5 HOH A 24 524 86 HOH HOH . H 5 HOH A 25 525 56 HOH HOH . H 5 HOH A 26 526 7 HOH HOH . H 5 HOH A 27 527 25 HOH HOH . H 5 HOH A 28 528 28 HOH HOH . H 5 HOH A 29 529 106 HOH HOH . H 5 HOH A 30 530 107 HOH HOH . H 5 HOH A 31 531 139 HOH HOH . H 5 HOH A 32 532 31 HOH HOH . H 5 HOH A 33 533 177 HOH HOH . H 5 HOH A 34 534 113 HOH HOH . H 5 HOH A 35 535 170 HOH HOH . H 5 HOH A 36 536 55 HOH HOH . H 5 HOH A 37 537 88 HOH HOH . H 5 HOH A 38 538 43 HOH HOH . H 5 HOH A 39 539 161 HOH HOH . H 5 HOH A 40 540 76 HOH HOH . H 5 HOH A 41 541 124 HOH HOH . H 5 HOH A 42 542 153 HOH HOH . H 5 HOH A 43 543 129 HOH HOH . H 5 HOH A 44 544 187 HOH HOH . H 5 HOH A 45 545 99 HOH HOH . H 5 HOH A 46 546 62 HOH HOH . H 5 HOH A 47 547 103 HOH HOH . H 5 HOH A 48 548 16 HOH HOH . H 5 HOH A 49 549 190 HOH HOH . H 5 HOH A 50 550 151 HOH HOH . H 5 HOH A 51 551 186 HOH HOH . H 5 HOH A 52 552 30 HOH HOH . H 5 HOH A 53 553 160 HOH HOH . H 5 HOH A 54 554 148 HOH HOH . H 5 HOH A 55 555 65 HOH HOH . H 5 HOH A 56 556 78 HOH HOH . H 5 HOH A 57 557 42 HOH HOH . H 5 HOH A 58 558 179 HOH HOH . H 5 HOH A 59 559 26 HOH HOH . H 5 HOH A 60 560 105 HOH HOH . H 5 HOH A 61 561 67 HOH HOH . H 5 HOH A 62 562 102 HOH HOH . H 5 HOH A 63 563 18 HOH HOH . H 5 HOH A 64 564 90 HOH HOH . H 5 HOH A 65 565 61 HOH HOH . H 5 HOH A 66 566 167 HOH HOH . H 5 HOH A 67 567 133 HOH HOH . H 5 HOH A 68 568 39 HOH HOH . H 5 HOH A 69 569 29 HOH HOH . H 5 HOH A 70 570 115 HOH HOH . H 5 HOH A 71 571 156 HOH HOH . H 5 HOH A 72 572 101 HOH HOH . H 5 HOH A 73 573 45 HOH HOH . H 5 HOH A 74 574 1 HOH HOH . H 5 HOH A 75 575 81 HOH HOH . H 5 HOH A 76 576 2 HOH HOH . H 5 HOH A 77 577 136 HOH HOH . H 5 HOH A 78 578 176 HOH HOH . H 5 HOH A 79 579 10 HOH HOH . H 5 HOH A 80 580 17 HOH HOH . H 5 HOH A 81 581 184 HOH HOH . H 5 HOH A 82 582 87 HOH HOH . H 5 HOH A 83 583 197 HOH HOH . H 5 HOH A 84 584 157 HOH HOH . H 5 HOH A 85 585 89 HOH HOH . H 5 HOH A 86 586 173 HOH HOH . H 5 HOH A 87 587 196 HOH HOH . H 5 HOH A 88 588 127 HOH HOH . H 5 HOH A 89 589 135 HOH HOH . H 5 HOH A 90 590 149 HOH HOH . H 5 HOH A 91 591 49 HOH HOH . H 5 HOH A 92 592 141 HOH HOH . H 5 HOH A 93 593 108 HOH HOH . I 5 HOH B 1 501 208 HOH HOH . I 5 HOH B 2 502 68 HOH HOH . I 5 HOH B 3 503 203 HOH HOH . I 5 HOH B 4 504 100 HOH HOH . I 5 HOH B 5 505 66 HOH HOH . I 5 HOH B 6 506 185 HOH HOH . I 5 HOH B 7 507 11 HOH HOH . I 5 HOH B 8 508 169 HOH HOH . I 5 HOH B 9 509 193 HOH HOH . I 5 HOH B 10 510 120 HOH HOH . I 5 HOH B 11 511 166 HOH HOH . I 5 HOH B 12 512 171 HOH HOH . I 5 HOH B 13 513 72 HOH HOH . I 5 HOH B 14 514 142 HOH HOH . I 5 HOH B 15 515 8 HOH HOH . I 5 HOH B 16 516 22 HOH HOH . I 5 HOH B 17 517 94 HOH HOH . I 5 HOH B 18 518 132 HOH HOH . I 5 HOH B 19 519 163 HOH HOH . I 5 HOH B 20 520 73 HOH HOH . I 5 HOH B 21 521 145 HOH HOH . I 5 HOH B 22 522 162 HOH HOH . I 5 HOH B 23 523 95 HOH HOH . I 5 HOH B 24 524 41 HOH HOH . I 5 HOH B 25 525 69 HOH HOH . I 5 HOH B 26 526 116 HOH HOH . I 5 HOH B 27 527 51 HOH HOH . I 5 HOH B 28 528 134 HOH HOH . I 5 HOH B 29 529 52 HOH HOH . I 5 HOH B 30 530 6 HOH HOH . I 5 HOH B 31 531 104 HOH HOH . I 5 HOH B 32 532 130 HOH HOH . I 5 HOH B 33 533 137 HOH HOH . I 5 HOH B 34 534 207 HOH HOH . I 5 HOH B 35 535 194 HOH HOH . I 5 HOH B 36 536 154 HOH HOH . I 5 HOH B 37 537 109 HOH HOH . I 5 HOH B 38 538 46 HOH HOH . I 5 HOH B 39 539 209 HOH HOH . I 5 HOH B 40 540 183 HOH HOH . I 5 HOH B 41 541 121 HOH HOH . I 5 HOH B 42 542 202 HOH HOH . I 5 HOH B 43 543 9 HOH HOH . I 5 HOH B 44 544 70 HOH HOH . I 5 HOH B 45 545 188 HOH HOH . I 5 HOH B 46 546 58 HOH HOH . I 5 HOH B 47 547 155 HOH HOH . I 5 HOH B 48 548 80 HOH HOH . I 5 HOH B 49 549 74 HOH HOH . I 5 HOH B 50 550 12 HOH HOH . I 5 HOH B 51 551 60 HOH HOH . I 5 HOH B 52 552 54 HOH HOH . I 5 HOH B 53 553 143 HOH HOH . I 5 HOH B 54 554 189 HOH HOH . I 5 HOH B 55 555 50 HOH HOH . I 5 HOH B 56 556 19 HOH HOH . I 5 HOH B 57 557 178 HOH HOH . I 5 HOH B 58 558 20 HOH HOH . I 5 HOH B 59 559 112 HOH HOH . I 5 HOH B 60 560 40 HOH HOH . I 5 HOH B 61 561 97 HOH HOH . I 5 HOH B 62 562 114 HOH HOH . I 5 HOH B 63 563 210 HOH HOH . I 5 HOH B 64 564 119 HOH HOH . I 5 HOH B 65 565 27 HOH HOH . I 5 HOH B 66 566 165 HOH HOH . I 5 HOH B 67 567 15 HOH HOH . I 5 HOH B 68 568 34 HOH HOH . I 5 HOH B 69 569 63 HOH HOH . I 5 HOH B 70 570 33 HOH HOH . I 5 HOH B 71 571 181 HOH HOH . I 5 HOH B 72 572 98 HOH HOH . I 5 HOH B 73 573 172 HOH HOH . I 5 HOH B 74 574 180 HOH HOH . I 5 HOH B 75 575 79 HOH HOH . I 5 HOH B 76 576 131 HOH HOH . I 5 HOH B 77 577 174 HOH HOH . I 5 HOH B 78 578 191 HOH HOH . I 5 HOH B 79 579 82 HOH HOH . I 5 HOH B 80 580 146 HOH HOH . I 5 HOH B 81 581 71 HOH HOH . I 5 HOH B 82 582 152 HOH HOH . I 5 HOH B 83 583 3 HOH HOH . I 5 HOH B 84 584 48 HOH HOH . I 5 HOH B 85 585 24 HOH HOH . I 5 HOH B 86 586 85 HOH HOH . I 5 HOH B 87 587 59 HOH HOH . I 5 HOH B 88 588 53 HOH HOH . I 5 HOH B 89 589 192 HOH HOH . I 5 HOH B 90 590 122 HOH HOH . I 5 HOH B 91 591 201 HOH HOH . I 5 HOH B 92 592 211 HOH HOH . I 5 HOH B 93 593 91 HOH HOH . I 5 HOH B 94 594 110 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 PEG . . . F 3 7.131 -16.535 9.711 1 28.26 ? C2 PEG 402 B 1 HETATM 2 O O2 PEG . . . F 3 7.318 -15.369 10.594 1 35.22 ? O2 PEG 402 B 1 HETATM 3 C C3 PEG . . . F 3 6.542 -15.293 11.853 1 18.95 ? C3 PEG 402 B 1 HETATM 4 C C4 PEG . . . F 3 7.338 -14.547 13.047 1 26 ? C4 PEG 402 B 1 HETATM 5 O O4 PEG . . . F 3 8.798 -14.268 12.87 1 20.48 ? O4 PEG 402 B 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #