data_6H2Y # _model_server_result.job_id ONmWUC_rxLFxd931XJmlpg _model_server_result.datetime_utc '2024-10-19 16:43:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6h2y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":309}' # _entry.id 6H2Y # _exptl.entry_id 6H2Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6H2Y _cell.length_a 42.979 _cell.length_b 65.279 _cell.length_c 278.828 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6H2Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id L _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 22 H CYS 22 1_555 B SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 B SG CYS 146 H CYS 146 1_555 B SG CYS 202 H CYS 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? disulf ? disulf3 C SG CYS 24 L CYS 22 1_555 C SG CYS 89 L CYS 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? disulf ? disulf4 C SG CYS 138 L CYS 136 1_555 C SG CYS 197 L CYS 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6H2Y _atom_sites.fract_transf_matrix[1][1] 0.023267 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015319 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003586 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 EDO H 1 301 1 EDO EDO . E 4 EDO H 1 302 2 EDO EDO . F 4 EDO H 1 303 3 EDO EDO . G 4 EDO H 1 304 4 EDO EDO . H 4 EDO H 1 305 5 EDO EDO . I 4 EDO H 1 306 6 EDO EDO . J 4 EDO H 1 307 9 EDO EDO . K 4 EDO H 1 308 10 EDO EDO . L 5 PEG H 1 309 1 PEG PEG . M 4 EDO L 1 301 7 EDO EDO . N 4 EDO L 1 302 8 EDO EDO . O 4 EDO L 1 303 11 EDO EDO . P 4 EDO L 1 304 12 EDO EDO . Q 6 P33 L 1 305 1 P33 P33 . R 7 PG4 L 1 306 1 PG4 PG4 . S 8 HOH D 1 301 5 HOH HOH . S 8 HOH D 2 302 6 HOH HOH . S 8 HOH D 3 303 37 HOH HOH . S 8 HOH D 4 304 71 HOH HOH . S 8 HOH D 5 305 36 HOH HOH . S 8 HOH D 6 306 55 HOH HOH . S 8 HOH D 7 307 73 HOH HOH . S 8 HOH D 8 308 49 HOH HOH . S 8 HOH D 9 309 74 HOH HOH . S 8 HOH D 10 310 60 HOH HOH . S 8 HOH D 11 311 52 HOH HOH . S 8 HOH D 12 312 67 HOH HOH . S 8 HOH D 13 313 51 HOH HOH . S 8 HOH D 14 314 50 HOH HOH . S 8 HOH D 15 315 72 HOH HOH . S 8 HOH D 16 316 66 HOH HOH . T 8 HOH H 1 401 40 HOH HOH . T 8 HOH H 2 402 48 HOH HOH . T 8 HOH H 3 403 33 HOH HOH . T 8 HOH H 4 404 3 HOH HOH . T 8 HOH H 5 405 47 HOH HOH . T 8 HOH H 6 406 13 HOH HOH . T 8 HOH H 7 407 2 HOH HOH . T 8 HOH H 8 408 14 HOH HOH . T 8 HOH H 9 409 68 HOH HOH . T 8 HOH H 10 410 54 HOH HOH . T 8 HOH H 11 411 59 HOH HOH . T 8 HOH H 12 412 41 HOH HOH . T 8 HOH H 13 413 7 HOH HOH . T 8 HOH H 14 414 4 HOH HOH . T 8 HOH H 15 415 69 HOH HOH . T 8 HOH H 16 416 34 HOH HOH . T 8 HOH H 17 417 62 HOH HOH . T 8 HOH H 18 418 1 HOH HOH . T 8 HOH H 19 419 9 HOH HOH . T 8 HOH H 20 420 17 HOH HOH . T 8 HOH H 21 421 16 HOH HOH . T 8 HOH H 22 422 15 HOH HOH . T 8 HOH H 23 423 8 HOH HOH . T 8 HOH H 24 424 31 HOH HOH . T 8 HOH H 25 425 12 HOH HOH . T 8 HOH H 26 426 35 HOH HOH . T 8 HOH H 27 427 57 HOH HOH . T 8 HOH H 28 428 32 HOH HOH . U 8 HOH L 1 401 10 HOH HOH . U 8 HOH L 2 402 61 HOH HOH . U 8 HOH L 3 403 42 HOH HOH . U 8 HOH L 4 404 29 HOH HOH . U 8 HOH L 5 405 53 HOH HOH . U 8 HOH L 6 406 25 HOH HOH . U 8 HOH L 7 407 38 HOH HOH . U 8 HOH L 8 408 58 HOH HOH . U 8 HOH L 9 409 45 HOH HOH . U 8 HOH L 10 410 44 HOH HOH . U 8 HOH L 11 411 28 HOH HOH . U 8 HOH L 12 412 30 HOH HOH . U 8 HOH L 13 413 21 HOH HOH . U 8 HOH L 14 414 11 HOH HOH . U 8 HOH L 15 415 63 HOH HOH . U 8 HOH L 16 416 39 HOH HOH . U 8 HOH L 17 417 18 HOH HOH . U 8 HOH L 18 418 43 HOH HOH . U 8 HOH L 19 419 22 HOH HOH . U 8 HOH L 20 420 24 HOH HOH . U 8 HOH L 21 421 26 HOH HOH . U 8 HOH L 22 422 27 HOH HOH . U 8 HOH L 23 423 19 HOH HOH . U 8 HOH L 24 424 56 HOH HOH . U 8 HOH L 25 425 46 HOH HOH . U 8 HOH L 26 426 23 HOH HOH . U 8 HOH L 27 427 20 HOH HOH . U 8 HOH L 28 428 64 HOH HOH . U 8 HOH L 29 429 65 HOH HOH . U 8 HOH L 30 430 70 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . L 5 -96.661 62.317 53.17 1 48.58 ? C1 PEG 309 H 1 HETATM 2 O O1 PEG . . . L 5 -97.997 61.885 53.229 1 54.58 ? O1 PEG 309 H 1 HETATM 3 C C2 PEG . . . L 5 -96.47 63.502 54.117 1 48 ? C2 PEG 309 H 1 HETATM 4 O O2 PEG . . . L 5 -95.101 63.688 54.379 1 53.94 ? O2 PEG 309 H 1 HETATM 5 C C3 PEG . . . L 5 -94.681 63.321 55.675 1 46.03 ? C3 PEG 309 H 1 HETATM 6 C C4 PEG . . . L 5 -95.515 64.015 56.768 1 51.03 ? C4 PEG 309 H 1 HETATM 7 O O4 PEG . . . L 5 -94.781 64.168 57.96 1 43.37 ? O4 PEG 309 H 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 7 #