data_6H35
#
_model_server_result.job_id            2UCNlbdog_UKs6Bu6R0sQQ 
_model_server_result.datetime_utc      '2024-11-16 04:46:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6h35 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":303}' 
#
_entry.id    6H35 
#
_exptl.entry_id    6H35 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              118.174 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (4S)-2-METHYL-2,4-PENTANEDIOL 
_entity.pdbx_number_of_molecules    9 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6H35 
_cell.length_a            88.6 
_cell.length_b            116.65 
_cell.length_c            49.11 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6H35 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    'P 2 2ab' 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,J,O 1 1 
B,K,L,M,N,P 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 F N N 
? 4 G N N 
? 4 H N N 
? 4 I N N 
? 4 J N N 
? 4 L N N 
? 4 M N N 
? 4 N N N 
#
_chem_comp.formula           'C6 H14 O2' 
_chem_comp.formula_weight    118.174 
_chem_comp.id                MPD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (4S)-2-METHYL-2,4-PENTANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 MPD sing 282 n n 
C1 H11 MPD sing 283 n n 
C1 H12 MPD sing 284 n n 
C1 H13 MPD sing 285 n n 
C2 O2 MPD sing 286 n n 
C2 CM MPD sing 287 n n 
C2 C3 MPD sing 288 n n 
O2 HO2 MPD sing 289 n n 
CM HM1 MPD sing 290 n n 
CM HM2 MPD sing 291 n n 
CM HM3 MPD sing 292 n n 
C3 C4 MPD sing 293 n n 
C3 H31 MPD sing 294 n n 
C3 H32 MPD sing 295 n n 
C4 O4 MPD sing 296 n n 
C4 C5 MPD sing 297 n n 
C4 H4 MPD sing 298 n n 
O4 HO4 MPD sing 299 n n 
C5 H51 MPD sing 300 n n 
C5 H52 MPD sing 301 n n 
C5 H53 MPD sing 302 n n 
#
_atom_sites.entry_id                     6H35 
_atom_sites.fract_transf_matrix[1][1]    0.011287 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008573 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.020362 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 GDP A 1 301 301 GDP GDP . 
D 3 PO4 A 1 302 302 PO4 PO4 . 
E 4 MPD A 1 303 1 MPD MPD . 
F 4 MPD A 1 304 5 MPD MPD . 
G 4 MPD A 1 305 6 MPD MPD . 
H 4 MPD A 1 306 7 MPD MPD . 
I 4 MPD A 1 307 8 MPD MPD . 
J 4 MPD A 1 308 10 MPD MPD . 
K 2 GDP B 1 301 301 GDP GDP . 
L 4 MPD B 1 302 2 MPD MPD . 
M 4 MPD B 1 303 3 MPD MPD . 
N 4 MPD B 1 304 9 MPD MPD . 
O 5 HOH A 1 401 167 HOH HOH . 
O 5 HOH A 2 402 169 HOH HOH . 
O 5 HOH A 3 403 34 HOH HOH . 
O 5 HOH A 4 404 37 HOH HOH . 
O 5 HOH A 5 405 44 HOH HOH . 
O 5 HOH A 6 406 3 HOH HOH . 
O 5 HOH A 7 407 150 HOH HOH . 
O 5 HOH A 8 408 13 HOH HOH . 
O 5 HOH A 9 409 10 HOH HOH . 
O 5 HOH A 10 410 105 HOH HOH . 
O 5 HOH A 11 411 41 HOH HOH . 
O 5 HOH A 12 412 114 HOH HOH . 
O 5 HOH A 13 413 101 HOH HOH . 
O 5 HOH A 14 414 36 HOH HOH . 
O 5 HOH A 15 415 56 HOH HOH . 
O 5 HOH A 16 416 170 HOH HOH . 
O 5 HOH A 17 417 54 HOH HOH . 
O 5 HOH A 18 418 30 HOH HOH . 
O 5 HOH A 19 419 137 HOH HOH . 
O 5 HOH A 20 420 25 HOH HOH . 
O 5 HOH A 21 421 91 HOH HOH . 
O 5 HOH A 22 422 40 HOH HOH . 
O 5 HOH A 23 423 103 HOH HOH . 
O 5 HOH A 24 424 111 HOH HOH . 
O 5 HOH A 25 425 98 HOH HOH . 
O 5 HOH A 26 426 51 HOH HOH . 
O 5 HOH A 27 427 163 HOH HOH . 
O 5 HOH A 28 428 53 HOH HOH . 
O 5 HOH A 29 429 31 HOH HOH . 
O 5 HOH A 30 430 149 HOH HOH . 
O 5 HOH A 31 431 17 HOH HOH . 
O 5 HOH A 32 432 81 HOH HOH . 
O 5 HOH A 33 433 158 HOH HOH . 
O 5 HOH A 34 434 18 HOH HOH . 
O 5 HOH A 35 435 28 HOH HOH . 
O 5 HOH A 36 436 12 HOH HOH . 
O 5 HOH A 37 437 130 HOH HOH . 
O 5 HOH A 38 438 71 HOH HOH . 
O 5 HOH A 39 439 58 HOH HOH . 
O 5 HOH A 40 440 147 HOH HOH . 
O 5 HOH A 41 441 118 HOH HOH . 
O 5 HOH A 42 442 139 HOH HOH . 
O 5 HOH A 43 443 82 HOH HOH . 
O 5 HOH A 44 444 66 HOH HOH . 
O 5 HOH A 45 445 45 HOH HOH . 
O 5 HOH A 46 446 154 HOH HOH . 
O 5 HOH A 47 447 43 HOH HOH . 
O 5 HOH A 48 448 47 HOH HOH . 
O 5 HOH A 49 449 112 HOH HOH . 
O 5 HOH A 50 450 87 HOH HOH . 
O 5 HOH A 51 451 65 HOH HOH . 
O 5 HOH A 52 452 133 HOH HOH . 
O 5 HOH A 53 453 176 HOH HOH . 
O 5 HOH A 54 454 116 HOH HOH . 
O 5 HOH A 55 455 73 HOH HOH . 
O 5 HOH A 56 456 86 HOH HOH . 
O 5 HOH A 57 457 80 HOH HOH . 
O 5 HOH A 58 458 52 HOH HOH . 
O 5 HOH A 59 459 121 HOH HOH . 
O 5 HOH A 60 460 113 HOH HOH . 
O 5 HOH A 61 461 159 HOH HOH . 
O 5 HOH A 62 462 79 HOH HOH . 
O 5 HOH A 63 463 1 HOH HOH . 
O 5 HOH A 64 464 95 HOH HOH . 
O 5 HOH A 65 465 22 HOH HOH . 
O 5 HOH A 66 466 153 HOH HOH . 
O 5 HOH A 67 467 110 HOH HOH . 
O 5 HOH A 68 468 29 HOH HOH . 
O 5 HOH A 69 469 74 HOH HOH . 
O 5 HOH A 70 470 107 HOH HOH . 
O 5 HOH A 71 471 78 HOH HOH . 
O 5 HOH A 72 472 164 HOH HOH . 
O 5 HOH A 73 473 175 HOH HOH . 
O 5 HOH A 74 474 131 HOH HOH . 
O 5 HOH A 75 475 48 HOH HOH . 
O 5 HOH A 76 476 39 HOH HOH . 
O 5 HOH A 77 477 72 HOH HOH . 
O 5 HOH A 78 478 168 HOH HOH . 
O 5 HOH A 79 479 109 HOH HOH . 
O 5 HOH A 80 480 143 HOH HOH . 
O 5 HOH A 81 481 152 HOH HOH . 
O 5 HOH A 82 482 83 HOH HOH . 
O 5 HOH A 83 483 142 HOH HOH . 
P 5 HOH B 1 401 156 HOH HOH . 
P 5 HOH B 2 402 104 HOH HOH . 
P 5 HOH B 3 403 102 HOH HOH . 
P 5 HOH B 4 404 123 HOH HOH . 
P 5 HOH B 5 405 2 HOH HOH . 
P 5 HOH B 6 406 61 HOH HOH . 
P 5 HOH B 7 407 5 HOH HOH . 
P 5 HOH B 8 408 108 HOH HOH . 
P 5 HOH B 9 409 49 HOH HOH . 
P 5 HOH B 10 410 8 HOH HOH . 
P 5 HOH B 11 411 33 HOH HOH . 
P 5 HOH B 12 412 26 HOH HOH . 
P 5 HOH B 13 413 140 HOH HOH . 
P 5 HOH B 14 414 19 HOH HOH . 
P 5 HOH B 15 415 6 HOH HOH . 
P 5 HOH B 16 416 89 HOH HOH . 
P 5 HOH B 17 417 77 HOH HOH . 
P 5 HOH B 18 418 69 HOH HOH . 
P 5 HOH B 19 419 173 HOH HOH . 
P 5 HOH B 20 420 124 HOH HOH . 
P 5 HOH B 21 421 165 HOH HOH . 
P 5 HOH B 22 422 46 HOH HOH . 
P 5 HOH B 23 423 129 HOH HOH . 
P 5 HOH B 24 424 132 HOH HOH . 
P 5 HOH B 25 425 62 HOH HOH . 
P 5 HOH B 26 426 64 HOH HOH . 
P 5 HOH B 27 427 138 HOH HOH . 
P 5 HOH B 28 428 92 HOH HOH . 
P 5 HOH B 29 429 21 HOH HOH . 
P 5 HOH B 30 430 151 HOH HOH . 
P 5 HOH B 31 431 67 HOH HOH . 
P 5 HOH B 32 432 93 HOH HOH . 
P 5 HOH B 33 433 117 HOH HOH . 
P 5 HOH B 34 434 42 HOH HOH . 
P 5 HOH B 35 435 119 HOH HOH . 
P 5 HOH B 36 436 15 HOH HOH . 
P 5 HOH B 37 437 38 HOH HOH . 
P 5 HOH B 38 438 55 HOH HOH . 
P 5 HOH B 39 439 161 HOH HOH . 
P 5 HOH B 40 440 20 HOH HOH . 
P 5 HOH B 41 441 70 HOH HOH . 
P 5 HOH B 42 442 148 HOH HOH . 
P 5 HOH B 43 443 106 HOH HOH . 
P 5 HOH B 44 444 63 HOH HOH . 
P 5 HOH B 45 445 122 HOH HOH . 
P 5 HOH B 46 446 125 HOH HOH . 
P 5 HOH B 47 447 115 HOH HOH . 
P 5 HOH B 48 448 135 HOH HOH . 
P 5 HOH B 49 449 94 HOH HOH . 
P 5 HOH B 50 450 96 HOH HOH . 
P 5 HOH B 51 451 84 HOH HOH . 
P 5 HOH B 52 452 128 HOH HOH . 
P 5 HOH B 53 453 144 HOH HOH . 
P 5 HOH B 54 454 145 HOH HOH . 
P 5 HOH B 55 455 120 HOH HOH . 
P 5 HOH B 56 456 90 HOH HOH . 
P 5 HOH B 57 457 88 HOH HOH . 
P 5 HOH B 58 458 59 HOH HOH . 
P 5 HOH B 59 459 155 HOH HOH . 
P 5 HOH B 60 460 136 HOH HOH . 
P 5 HOH B 61 461 141 HOH HOH . 
P 5 HOH B 62 462 76 HOH HOH . 
P 5 HOH B 63 463 127 HOH HOH . 
P 5 HOH B 64 464 134 HOH HOH . 
P 5 HOH B 65 465 75 HOH HOH . 
P 5 HOH B 66 466 146 HOH HOH . 
P 5 HOH B 67 467 85 HOH HOH . 
P 5 HOH B 68 468 57 HOH HOH . 
P 5 HOH B 69 469 126 HOH HOH . 
P 5 HOH B 70 470 172 HOH HOH . 
P 5 HOH B 71 471 171 HOH HOH . 
P 5 HOH B 72 472 157 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 MPD . . . M 4 34.922 12.15 79.585 1 58.91 ? C1 MPD 303 B 1 
HETATM 2 C C2 MPD . . . M 4 35.94 11.111 80.042 1 59.24 ? C2 MPD 303 B 1 
HETATM 3 O O2 MPD . . . M 4 37.021 11.792 80.727 1 60.16 ? O2 MPD 303 B 1 
HETATM 4 C CM MPD . . . M 4 35.262 10.193 81.051 1 58.97 ? CM MPD 303 B 1 
HETATM 5 C C3 MPD . . . M 4 36.475 10.261 78.883 1 59.05 ? C3 MPD 303 B 1 
HETATM 6 C C4 MPD . . . M 4 37.49 10.898 77.919 1 58.59 ? C4 MPD 303 B 1 
HETATM 7 O O4 MPD . . . M 4 37.094 12.185 77.496 1 58.18 ? O4 MPD 303 B 1 
HETATM 8 C C5 MPD . . . M 4 38.903 10.969 78.498 1 58.78 ? C5 MPD 303 B 1 
#
_model_server_stats.io_time_ms              61 
_model_server_stats.parse_time_ms           29 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           334 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           8 
#