data_6H38
#
_model_server_result.job_id            cCKUTwEKE4nPY0Ra6PUg0w 
_model_server_result.datetime_utc      '2024-10-19 12:23:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6h38 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":303}' 
#
_entry.id    6H38 
#
_exptl.entry_id    6H38 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6H38 
_cell.length_a            66.1 
_cell.length_b            89.24 
_cell.length_c            44.2 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6H38 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 58 A CYS 54 1_555 A SG CYS 182 A CYS 178 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
metalc ? metalc1 A NE2 HIS 98 A HIS 94 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.988 ? 
metalc ? metalc2 A NE2 HIS 100 A HIS 96 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? 
metalc ? metalc3 A ND1 HIS 123 A HIS 119 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? 
metalc ? metalc4 B ZN ZN . A ZN 301 1_555 C N1 FKK . A FKK 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 177 n n 
C1 C2 GOL sing 178 n n 
C1 H11 GOL sing 179 n n 
C1 H12 GOL sing 180 n n 
O1 HO1 GOL sing 181 n n 
C2 O2 GOL sing 182 n n 
C2 C3 GOL sing 183 n n 
C2 H2 GOL sing 184 n n 
O2 HO2 GOL sing 185 n n 
C3 O3 GOL sing 186 n n 
C3 H31 GOL sing 187 n n 
C3 H32 GOL sing 188 n n 
O3 HO3 GOL sing 189 n n 
#
_atom_sites.entry_id                     6H38 
_atom_sites.fract_transf_matrix[1][1]    0.015129 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011206 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.022624 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN A 1 301 263 ZN ZN . 
C 3 FKK A 1 302 264 FKK CH7 . 
D 4 GOL A 1 303 265 GOL GOL . 
E 4 GOL A 1 304 266 GOL GOL . 
F 5 HOH A 1 401 317 HOH HOH . 
F 5 HOH A 2 402 426 HOH HOH . 
F 5 HOH A 3 403 327 HOH HOH . 
F 5 HOH A 4 404 439 HOH HOH . 
F 5 HOH A 5 405 406 HOH HOH . 
F 5 HOH A 6 406 319 HOH HOH . 
F 5 HOH A 7 407 371 HOH HOH . 
F 5 HOH A 8 408 386 HOH HOH . 
F 5 HOH A 9 409 377 HOH HOH . 
F 5 HOH A 10 410 380 HOH HOH . 
F 5 HOH A 11 411 303 HOH HOH . 
F 5 HOH A 12 412 424 HOH HOH . 
F 5 HOH A 13 413 348 HOH HOH . 
F 5 HOH A 14 414 305 HOH HOH . 
F 5 HOH A 15 415 361 HOH HOH . 
F 5 HOH A 16 416 376 HOH HOH . 
F 5 HOH A 17 417 436 HOH HOH . 
F 5 HOH A 18 418 416 HOH HOH . 
F 5 HOH A 19 419 382 HOH HOH . 
F 5 HOH A 20 420 318 HOH HOH . 
F 5 HOH A 21 421 369 HOH HOH . 
F 5 HOH A 22 422 310 HOH HOH . 
F 5 HOH A 23 423 366 HOH HOH . 
F 5 HOH A 24 424 364 HOH HOH . 
F 5 HOH A 25 425 434 HOH HOH . 
F 5 HOH A 26 426 336 HOH HOH . 
F 5 HOH A 27 427 430 HOH HOH . 
F 5 HOH A 28 428 312 HOH HOH . 
F 5 HOH A 29 429 379 HOH HOH . 
F 5 HOH A 30 430 326 HOH HOH . 
F 5 HOH A 31 431 338 HOH HOH . 
F 5 HOH A 32 432 411 HOH HOH . 
F 5 HOH A 33 433 387 HOH HOH . 
F 5 HOH A 34 434 385 HOH HOH . 
F 5 HOH A 35 435 440 HOH HOH . 
F 5 HOH A 36 436 302 HOH HOH . 
F 5 HOH A 37 437 403 HOH HOH . 
F 5 HOH A 38 438 389 HOH HOH . 
F 5 HOH A 39 439 332 HOH HOH . 
F 5 HOH A 40 440 443 HOH HOH . 
F 5 HOH A 41 441 313 HOH HOH . 
F 5 HOH A 42 442 304 HOH HOH . 
F 5 HOH A 43 443 355 HOH HOH . 
F 5 HOH A 44 444 383 HOH HOH . 
F 5 HOH A 45 445 444 HOH HOH . 
F 5 HOH A 46 446 308 HOH HOH . 
F 5 HOH A 47 447 306 HOH HOH . 
F 5 HOH A 48 448 324 HOH HOH . 
F 5 HOH A 49 449 325 HOH HOH . 
F 5 HOH A 50 450 363 HOH HOH . 
F 5 HOH A 51 451 334 HOH HOH . 
F 5 HOH A 52 452 346 HOH HOH . 
F 5 HOH A 53 453 429 HOH HOH . 
F 5 HOH A 54 454 311 HOH HOH . 
F 5 HOH A 55 455 421 HOH HOH . 
F 5 HOH A 56 456 384 HOH HOH . 
F 5 HOH A 57 457 398 HOH HOH . 
F 5 HOH A 58 458 331 HOH HOH . 
F 5 HOH A 59 459 420 HOH HOH . 
F 5 HOH A 60 460 307 HOH HOH . 
F 5 HOH A 61 461 397 HOH HOH . 
F 5 HOH A 62 462 432 HOH HOH . 
F 5 HOH A 63 463 315 HOH HOH . 
F 5 HOH A 64 464 410 HOH HOH . 
F 5 HOH A 65 465 320 HOH HOH . 
F 5 HOH A 66 466 350 HOH HOH . 
F 5 HOH A 67 467 344 HOH HOH . 
F 5 HOH A 68 468 433 HOH HOH . 
F 5 HOH A 69 469 365 HOH HOH . 
F 5 HOH A 70 470 353 HOH HOH . 
F 5 HOH A 71 471 427 HOH HOH . 
F 5 HOH A 72 472 414 HOH HOH . 
F 5 HOH A 73 473 345 HOH HOH . 
F 5 HOH A 74 474 330 HOH HOH . 
F 5 HOH A 75 475 301 HOH HOH . 
F 5 HOH A 76 476 321 HOH HOH . 
F 5 HOH A 77 477 343 HOH HOH . 
F 5 HOH A 78 478 417 HOH HOH . 
F 5 HOH A 79 479 323 HOH HOH . 
F 5 HOH A 80 480 309 HOH HOH . 
F 5 HOH A 81 481 340 HOH HOH . 
F 5 HOH A 82 482 381 HOH HOH . 
F 5 HOH A 83 483 372 HOH HOH . 
F 5 HOH A 84 484 409 HOH HOH . 
F 5 HOH A 85 485 335 HOH HOH . 
F 5 HOH A 86 486 328 HOH HOH . 
F 5 HOH A 87 487 359 HOH HOH . 
F 5 HOH A 88 488 333 HOH HOH . 
F 5 HOH A 89 489 405 HOH HOH . 
F 5 HOH A 90 490 415 HOH HOH . 
F 5 HOH A 91 491 351 HOH HOH . 
F 5 HOH A 92 492 400 HOH HOH . 
F 5 HOH A 93 493 337 HOH HOH . 
F 5 HOH A 94 494 329 HOH HOH . 
F 5 HOH A 95 495 374 HOH HOH . 
F 5 HOH A 96 496 423 HOH HOH . 
F 5 HOH A 97 497 314 HOH HOH . 
F 5 HOH A 98 498 349 HOH HOH . 
F 5 HOH A 99 499 341 HOH HOH . 
F 5 HOH A 100 500 412 HOH HOH . 
F 5 HOH A 101 501 388 HOH HOH . 
F 5 HOH A 102 502 339 HOH HOH . 
F 5 HOH A 103 503 367 HOH HOH . 
F 5 HOH A 104 504 360 HOH HOH . 
F 5 HOH A 105 505 428 HOH HOH . 
F 5 HOH A 106 506 408 HOH HOH . 
F 5 HOH A 107 507 352 HOH HOH . 
F 5 HOH A 108 508 373 HOH HOH . 
F 5 HOH A 109 509 342 HOH HOH . 
F 5 HOH A 110 510 316 HOH HOH . 
F 5 HOH A 111 511 442 HOH HOH . 
F 5 HOH A 112 512 431 HOH HOH . 
F 5 HOH A 113 513 404 HOH HOH . 
F 5 HOH A 114 514 419 HOH HOH . 
F 5 HOH A 115 515 422 HOH HOH . 
F 5 HOH A 116 516 362 HOH HOH . 
F 5 HOH A 117 517 370 HOH HOH . 
F 5 HOH A 118 518 368 HOH HOH . 
F 5 HOH A 119 519 401 HOH HOH . 
F 5 HOH A 120 520 437 HOH HOH . 
F 5 HOH A 121 521 354 HOH HOH . 
F 5 HOH A 122 522 438 HOH HOH . 
F 5 HOH A 123 523 399 HOH HOH . 
F 5 HOH A 124 524 402 HOH HOH . 
F 5 HOH A 125 525 322 HOH HOH . 
F 5 HOH A 126 526 358 HOH HOH . 
F 5 HOH A 127 527 357 HOH HOH . 
F 5 HOH A 128 528 375 HOH HOH . 
F 5 HOH A 129 529 435 HOH HOH . 
F 5 HOH A 130 530 441 HOH HOH . 
F 5 HOH A 131 531 392 HOH HOH . 
F 5 HOH A 132 532 395 HOH HOH . 
F 5 HOH A 133 533 425 HOH HOH . 
F 5 HOH A 134 534 356 HOH HOH . 
F 5 HOH A 135 535 394 HOH HOH . 
F 5 HOH A 136 536 347 HOH HOH . 
F 5 HOH A 137 537 418 HOH HOH . 
F 5 HOH A 138 538 413 HOH HOH . 
F 5 HOH A 139 539 378 HOH HOH . 
F 5 HOH A 140 540 396 HOH HOH . 
F 5 HOH A 141 541 407 HOH HOH . 
F 5 HOH A 142 542 393 HOH HOH . 
F 5 HOH A 143 543 391 HOH HOH . 
F 5 HOH A 144 544 390 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . D 4 13.359 21.168 7.472 1 28.93 ? C1 GOL 303 A 1 
HETATM 2 O O1 GOL . . . D 4 14.645 20.64 7.758 1 27.76 ? O1 GOL 303 A 1 
HETATM 3 C C2 GOL . . . D 4 13.274 21.656 6.046 1 28.02 ? C2 GOL 303 A 1 
HETATM 4 O O2 GOL . . . D 4 11.916 21.595 5.602 1 24.65 ? O2 GOL 303 A 1 
HETATM 5 C C3 GOL . . . D 4 13.77 23.076 5.921 1 26.59 ? C3 GOL 303 A 1 
HETATM 6 O O3 GOL . . . D 4 14.183 23.352 4.592 1 31.66 ? O3 GOL 303 A 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           342 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           6 
#