data_6H42
#
_model_server_result.job_id            Ia-aY2s5fa93xbhqeYWuPA 
_model_server_result.datetime_utc      '2024-11-22 09:06:58' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6h42 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"S","auth_seq_id":509}' 
#
_entry.id    6H42 
#
_exptl.entry_id    6H42 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              147.129 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'GLUTAMIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          108.46 
_cell.angle_gamma         90 
_cell.entry_id            6H42 
_cell.length_a            127.7 
_cell.length_b            157.82 
_cell.length_c            47.77 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6H42 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,J,T 1 1 
B,K,L,M,N,O,P,Q,R,S,U 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             S 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O TYR 65 A TYR 75 1_555 C K K . A K 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.498 ? 
metalc ? metalc2 A O LEU 67 A LEU 77 1_555 C K K . A K 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.497 ? 
metalc ? metalc3 A O ARG 70 A ARG 80 1_555 C K K . A K 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.451 ? 
metalc ? metalc4 A O GLY 72 A GLY 82 1_555 C K K . A K 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.634 ? 
metalc ? metalc5 A OE2 GLU 74 A GLU 84 1_555 C K K . A K 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.994 ? 
metalc ? metalc6 A SG CYS 307 A CYS 317 1_555 D ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? 
metalc ? metalc7 A SG CYS 309 A CYS 319 1_555 D ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? 
metalc ? metalc8 A SG CYS 312 A CYS 322 1_555 D ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? 
metalc ? metalc9 A ND1 HIS 338 A HIS 348 1_555 D ZN ZN . A ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? 
metalc ? metalc10 B O TYR 65 B TYR 75 1_555 K K K . B K 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? 
metalc ? metalc11 B O LEU 67 B LEU 77 1_555 K K K . B K 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.538 ? 
metalc ? metalc12 B O ARG 70 B ARG 80 1_555 K K K . B K 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? 
metalc ? metalc13 B O GLY 72 B GLY 82 1_555 K K K . B K 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.74 ? 
metalc ? metalc14 B OE1 GLU 74 B GLU 84 1_555 K K K . B K 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.411 ? 
metalc ? metalc15 B SG CYS 307 B CYS 317 1_555 L ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? 
metalc ? metalc16 B SG CYS 309 B CYS 319 1_555 L ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? 
metalc ? metalc17 B SG CYS 312 B CYS 322 1_555 L ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? 
metalc ? metalc18 B ND1 HIS 338 B HIS 348 1_555 L ZN ZN . B ZN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? 
#
_chem_comp.formula           'C5 H9 N O4' 
_chem_comp.formula_weight    147.129 
_chem_comp.id                GLU 
_chem_comp.mon_nstd_flag     y 
_chem_comp.name              'GLUTAMIC ACID' 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA GLU sing 102 n n 
N H GLU sing 103 n n 
N H2 GLU sing 104 n n 
CA C GLU sing 105 n n 
CA CB GLU sing 106 n n 
CA HA GLU sing 107 n n 
C O GLU doub 108 n n 
C OXT GLU sing 109 n n 
CB CG GLU sing 110 n n 
CB HB2 GLU sing 111 n n 
CB HB3 GLU sing 112 n n 
CG CD GLU sing 113 n n 
CG HG2 GLU sing 114 n n 
CG HG3 GLU sing 115 n n 
CD OE1 GLU doub 116 n n 
CD OE2 GLU sing 117 n n 
OE2 HE2 GLU sing 118 n n 
OXT HXT GLU sing 119 n n 
#
_atom_sites.entry_id                     6H42 
_atom_sites.fract_transf_matrix[1][1]    0.007831 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002613 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006336 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.022069 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 K A 1 501 501 K K . 
D 3 ZN A 1 502 3 ZN ZN . 
E 4 CL A 1 503 3 CL CL . 
F 4 CL A 1 504 7 CL CL . 
G 4 CL A 1 505 10 CL CL . 
H 4 CL A 1 506 13 CL CL . 
I 4 CL A 1 507 15 CL CL . 
J 5 BR A 1 508 7 BR BR . 
K 2 K B 1 501 501 K K . 
L 3 ZN B 1 502 2 ZN ZN . 
M 4 CL B 1 503 6 CL CL . 
N 4 CL B 1 504 11 CL CL . 
O 4 CL B 1 505 12 CL CL . 
P 4 CL B 1 506 14 CL CL . 
Q 4 CL B 1 507 16 CL CL . 
R 5 BR B 1 508 6 BR BR . 
S 6 GLU B 1 509 1 GLU GGL . 
T 7 HOH A 1 601 157 HOH HOH . 
T 7 HOH A 2 602 31 HOH HOH . 
T 7 HOH A 3 603 125 HOH HOH . 
T 7 HOH A 4 604 101 HOH HOH . 
T 7 HOH A 5 605 2 HOH HOH . 
T 7 HOH A 6 606 12 HOH HOH . 
T 7 HOH A 7 607 9 HOH HOH . 
T 7 HOH A 8 608 104 HOH HOH . 
T 7 HOH A 9 609 47 HOH HOH . 
T 7 HOH A 10 610 41 HOH HOH . 
T 7 HOH A 11 611 63 HOH HOH . 
T 7 HOH A 12 612 18 HOH HOH . 
T 7 HOH A 13 613 44 HOH HOH . 
T 7 HOH A 14 614 105 HOH HOH . 
T 7 HOH A 15 615 37 HOH HOH . 
T 7 HOH A 16 616 138 HOH HOH . 
T 7 HOH A 17 617 25 HOH HOH . 
T 7 HOH A 18 618 15 HOH HOH . 
T 7 HOH A 19 619 21 HOH HOH . 
T 7 HOH A 20 620 79 HOH HOH . 
T 7 HOH A 21 621 139 HOH HOH . 
T 7 HOH A 22 622 76 HOH HOH . 
T 7 HOH A 23 623 14 HOH HOH . 
T 7 HOH A 24 624 34 HOH HOH . 
T 7 HOH A 25 625 6 HOH HOH . 
T 7 HOH A 26 626 17 HOH HOH . 
T 7 HOH A 27 627 45 HOH HOH . 
T 7 HOH A 28 628 27 HOH HOH . 
T 7 HOH A 29 629 22 HOH HOH . 
T 7 HOH A 30 630 51 HOH HOH . 
T 7 HOH A 31 631 143 HOH HOH . 
T 7 HOH A 32 632 48 HOH HOH . 
T 7 HOH A 33 633 95 HOH HOH . 
T 7 HOH A 34 634 137 HOH HOH . 
T 7 HOH A 35 635 66 HOH HOH . 
T 7 HOH A 36 636 87 HOH HOH . 
T 7 HOH A 37 637 126 HOH HOH . 
T 7 HOH A 38 638 140 HOH HOH . 
T 7 HOH A 39 639 121 HOH HOH . 
T 7 HOH A 40 640 65 HOH HOH . 
T 7 HOH A 41 641 118 HOH HOH . 
T 7 HOH A 42 642 134 HOH HOH . 
T 7 HOH A 43 643 120 HOH HOH . 
T 7 HOH A 44 644 141 HOH HOH . 
T 7 HOH A 45 645 19 HOH HOH . 
T 7 HOH A 46 646 119 HOH HOH . 
T 7 HOH A 47 647 130 HOH HOH . 
U 7 HOH B 1 601 136 HOH HOH . 
U 7 HOH B 2 602 24 HOH HOH . 
U 7 HOH B 3 603 23 HOH HOH . 
U 7 HOH B 4 604 158 HOH HOH . 
U 7 HOH B 5 605 107 HOH HOH . 
U 7 HOH B 6 606 26 HOH HOH . 
U 7 HOH B 7 607 124 HOH HOH . 
U 7 HOH B 8 608 4 HOH HOH . 
U 7 HOH B 9 609 43 HOH HOH . 
U 7 HOH B 10 610 71 HOH HOH . 
U 7 HOH B 11 611 7 HOH HOH . 
U 7 HOH B 12 612 50 HOH HOH . 
U 7 HOH B 13 613 33 HOH HOH . 
U 7 HOH B 14 614 16 HOH HOH . 
U 7 HOH B 15 615 61 HOH HOH . 
U 7 HOH B 16 616 160 HOH HOH . 
U 7 HOH B 17 617 42 HOH HOH . 
U 7 HOH B 18 618 28 HOH HOH . 
U 7 HOH B 19 619 67 HOH HOH . 
U 7 HOH B 20 620 59 HOH HOH . 
U 7 HOH B 21 621 20 HOH HOH . 
U 7 HOH B 22 622 36 HOH HOH . 
U 7 HOH B 23 623 11 HOH HOH . 
U 7 HOH B 24 624 5 HOH HOH . 
U 7 HOH B 25 625 52 HOH HOH . 
U 7 HOH B 26 626 102 HOH HOH . 
U 7 HOH B 27 627 93 HOH HOH . 
U 7 HOH B 28 628 8 HOH HOH . 
U 7 HOH B 29 629 111 HOH HOH . 
U 7 HOH B 30 630 85 HOH HOH . 
U 7 HOH B 31 631 69 HOH HOH . 
U 7 HOH B 32 632 128 HOH HOH . 
U 7 HOH B 33 633 32 HOH HOH . 
U 7 HOH B 34 634 88 HOH HOH . 
U 7 HOH B 35 635 75 HOH HOH . 
U 7 HOH B 36 636 70 HOH HOH . 
U 7 HOH B 37 637 112 HOH HOH . 
U 7 HOH B 38 638 64 HOH HOH . 
U 7 HOH B 39 639 117 HOH HOH . 
U 7 HOH B 40 640 89 HOH HOH . 
U 7 HOH B 41 641 113 HOH HOH . 
U 7 HOH B 42 642 81 HOH HOH . 
U 7 HOH B 43 643 156 HOH HOH . 
U 7 HOH B 44 644 132 HOH HOH . 
U 7 HOH B 45 645 83 HOH HOH . 
U 7 HOH B 46 646 159 HOH HOH . 
U 7 HOH B 47 647 110 HOH HOH . 
U 7 HOH B 48 648 144 HOH HOH . 
U 7 HOH B 49 649 146 HOH HOH . 
U 7 HOH B 50 650 152 HOH HOH . 
U 7 HOH B 51 651 155 HOH HOH . 
U 7 HOH B 52 652 131 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N GLU . . . S 6 33.452 -47.14 90.76 0.5 95.15 ? N GLU 509 B 1 
HETATM 2 C CA GLU . . . S 6 32.88 -47.561 89.493 0.88 93.49 ? CA GLU 509 B 1 
HETATM 3 C C GLU . . . S 6 32.228 -48.937 89.637 0.88 90.05 ? C GLU 509 B 1 
HETATM 4 O O GLU . . . S 6 32.186 -49.718 88.65 0.88 87.52 ? O GLU 509 B 1 
HETATM 5 C CB GLU . . . S 6 33.962 -47.591 88.412 0.88 94.33 ? CB GLU 509 B 1 
HETATM 6 C CG GLU . . . S 6 33.674 -46.549 87.332 0.88 91.09 ? CG GLU 509 B 1 
HETATM 7 C CD GLU . . . S 6 34.253 -45.186 87.71 0.88 90.62 ? CD GLU 509 B 1 
HETATM 8 O OE1 GLU . . . S 6 35.051 -44.61 86.924 0.88 90.23 ? OE1 GLU 509 B 1 
HETATM 9 O OE2 GLU . . . S 6 33.936 -44.635 88.797 0.88 90.75 ? OE2 GLU 509 B 1 
HETATM 10 O OXT GLU . . . S 6 31.733 -49.289 90.741 0.88 88.85 ? OXT GLU 509 B 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    17 
_model_server_stats.query_time_ms           263 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           10 
#