data_6H44
#
_model_server_result.job_id            -lX2pyaqefJTj30QdbXDpQ 
_model_server_result.datetime_utc      '2024-11-08 01:24:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6h44 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":609}' 
#
_entry.id    6H44 
#
_exptl.entry_id    6H44 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    14 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6H44 
_cell.length_a            136.7 
_cell.length_b            136.7 
_cell.length_c            144.9 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6H44 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        172 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 64' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,J,K,L,M,N,O,P,AA 1 1 
B,Q,R,S,T,U,V,W,X,Y,Z,BA 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
? 3 M N N 
? 3 N N N 
? 3 U N N 
? 3 V N N 
? 3 W N N 
? 3 X N N 
? 3 Y N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O GLY 225 A GLY 222 1_555 P K K . A K 614 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.981 ? 
metalc ? metalc2 A OD1 ASP 226 A ASP 223 1_555 P K K . A K 614 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.804 ? 
metalc ? metalc3 P K K . A K 614 1_555 AA O HOH . A HOH 743 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.731 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     6H44 
_atom_sites.fract_transf_matrix[1][1]    0.007315 
_atom_sites.fract_transf_matrix[1][2]    0.004223 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008447 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006901 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 PO4 A 1 601 1 PO4 PO4 . 
D 2 PO4 A 1 602 2 PO4 PO4 . 
E 2 PO4 A 1 603 5 PO4 PO4 . 
F 3 GOL A 1 604 1 GOL GOL . 
G 3 GOL A 1 605 4 GOL GOL . 
H 3 GOL A 1 606 5 GOL GOL . 
I 3 GOL A 1 607 12 GOL GOL . 
J 3 GOL A 1 608 14 GOL GOL . 
K 3 GOL A 1 609 16 GOL GOL . 
L 3 GOL A 1 610 17 GOL GOL . 
M 3 GOL A 1 611 18 GOL GOL . 
N 3 GOL A 1 612 19 GOL GOL . 
O 4 TRP A 1 613 1 TRP TRP . 
P 5 K A 1 614 1 K K . 
Q 2 PO4 B 1 601 3 PO4 PO4 . 
R 2 PO4 B 1 602 4 PO4 PO4 . 
S 2 PO4 B 1 603 6 PO4 PO4 . 
T 2 PO4 B 1 604 8 PO4 PO4 . 
U 3 GOL B 1 605 6 GOL GOL . 
V 3 GOL B 1 606 8 GOL GOL . 
W 3 GOL B 1 607 11 GOL GOL . 
X 3 GOL B 1 608 13 GOL GOL . 
Y 3 GOL B 1 609 20 GOL GOL . 
Z 4 TRP B 1 610 2 TRP TRP . 
AA 6 HOH A 1 701 37 HOH HOH . 
AA 6 HOH A 2 702 50 HOH HOH . 
AA 6 HOH A 3 703 58 HOH HOH . 
AA 6 HOH A 4 704 196 HOH HOH . 
AA 6 HOH A 5 705 43 HOH HOH . 
AA 6 HOH A 6 706 134 HOH HOH . 
AA 6 HOH A 7 707 164 HOH HOH . 
AA 6 HOH A 8 708 161 HOH HOH . 
AA 6 HOH A 9 709 85 HOH HOH . 
AA 6 HOH A 10 710 117 HOH HOH . 
AA 6 HOH A 11 711 193 HOH HOH . 
AA 6 HOH A 12 712 67 HOH HOH . 
AA 6 HOH A 13 713 86 HOH HOH . 
AA 6 HOH A 14 714 143 HOH HOH . 
AA 6 HOH A 15 715 40 HOH HOH . 
AA 6 HOH A 16 716 138 HOH HOH . 
AA 6 HOH A 17 717 118 HOH HOH . 
AA 6 HOH A 18 718 82 HOH HOH . 
AA 6 HOH A 19 719 220 HOH HOH . 
AA 6 HOH A 20 720 13 HOH HOH . 
AA 6 HOH A 21 721 19 HOH HOH . 
AA 6 HOH A 22 722 1 HOH HOH . 
AA 6 HOH A 23 723 63 HOH HOH . 
AA 6 HOH A 24 724 61 HOH HOH . 
AA 6 HOH A 25 725 114 HOH HOH . 
AA 6 HOH A 26 726 201 HOH HOH . 
AA 6 HOH A 27 727 211 HOH HOH . 
AA 6 HOH A 28 728 28 HOH HOH . 
AA 6 HOH A 29 729 116 HOH HOH . 
AA 6 HOH A 30 730 185 HOH HOH . 
AA 6 HOH A 31 731 175 HOH HOH . 
AA 6 HOH A 32 732 198 HOH HOH . 
AA 6 HOH A 33 733 8 HOH HOH . 
AA 6 HOH A 34 734 113 HOH HOH . 
AA 6 HOH A 35 735 234 HOH HOH . 
AA 6 HOH A 36 736 81 HOH HOH . 
AA 6 HOH A 37 737 240 HOH HOH . 
AA 6 HOH A 38 738 54 HOH HOH . 
AA 6 HOH A 39 739 69 HOH HOH . 
AA 6 HOH A 40 740 73 HOH HOH . 
AA 6 HOH A 41 741 97 HOH HOH . 
AA 6 HOH A 42 742 30 HOH HOH . 
AA 6 HOH A 43 743 60 HOH HOH . 
AA 6 HOH A 44 744 79 HOH HOH . 
AA 6 HOH A 45 745 146 HOH HOH . 
AA 6 HOH A 46 746 65 HOH HOH . 
AA 6 HOH A 47 747 75 HOH HOH . 
AA 6 HOH A 48 748 207 HOH HOH . 
AA 6 HOH A 49 749 217 HOH HOH . 
AA 6 HOH A 50 750 18 HOH HOH . 
AA 6 HOH A 51 751 49 HOH HOH . 
AA 6 HOH A 52 752 151 HOH HOH . 
AA 6 HOH A 53 753 111 HOH HOH . 
AA 6 HOH A 54 754 24 HOH HOH . 
AA 6 HOH A 55 755 173 HOH HOH . 
AA 6 HOH A 56 756 2 HOH HOH . 
AA 6 HOH A 57 757 195 HOH HOH . 
AA 6 HOH A 58 758 41 HOH HOH . 
AA 6 HOH A 59 759 202 HOH HOH . 
AA 6 HOH A 60 760 104 HOH HOH . 
AA 6 HOH A 61 761 188 HOH HOH . 
AA 6 HOH A 62 762 62 HOH HOH . 
AA 6 HOH A 63 763 91 HOH HOH . 
AA 6 HOH A 64 764 144 HOH HOH . 
AA 6 HOH A 65 765 129 HOH HOH . 
AA 6 HOH A 66 766 115 HOH HOH . 
AA 6 HOH A 67 767 4 HOH HOH . 
AA 6 HOH A 68 768 20 HOH HOH . 
AA 6 HOH A 69 769 92 HOH HOH . 
AA 6 HOH A 70 770 27 HOH HOH . 
AA 6 HOH A 71 771 38 HOH HOH . 
AA 6 HOH A 72 772 110 HOH HOH . 
AA 6 HOH A 73 773 99 HOH HOH . 
AA 6 HOH A 74 774 87 HOH HOH . 
AA 6 HOH A 75 775 32 HOH HOH . 
AA 6 HOH A 76 776 5 HOH HOH . 
AA 6 HOH A 77 777 141 HOH HOH . 
AA 6 HOH A 78 778 169 HOH HOH . 
AA 6 HOH A 79 779 89 HOH HOH . 
AA 6 HOH A 80 780 112 HOH HOH . 
AA 6 HOH A 81 781 152 HOH HOH . 
AA 6 HOH A 82 782 25 HOH HOH . 
AA 6 HOH A 83 783 93 HOH HOH . 
AA 6 HOH A 84 784 222 HOH HOH . 
AA 6 HOH A 85 785 74 HOH HOH . 
AA 6 HOH A 86 786 90 HOH HOH . 
AA 6 HOH A 87 787 171 HOH HOH . 
AA 6 HOH A 88 788 183 HOH HOH . 
AA 6 HOH A 89 789 44 HOH HOH . 
AA 6 HOH A 90 790 219 HOH HOH . 
AA 6 HOH A 91 791 66 HOH HOH . 
AA 6 HOH A 92 792 68 HOH HOH . 
AA 6 HOH A 93 793 218 HOH HOH . 
AA 6 HOH A 94 794 154 HOH HOH . 
AA 6 HOH A 95 795 142 HOH HOH . 
AA 6 HOH A 96 796 52 HOH HOH . 
AA 6 HOH A 97 797 165 HOH HOH . 
AA 6 HOH A 98 798 76 HOH HOH . 
AA 6 HOH A 99 799 119 HOH HOH . 
AA 6 HOH A 100 800 149 HOH HOH . 
AA 6 HOH A 101 801 209 HOH HOH . 
AA 6 HOH A 102 802 84 HOH HOH . 
AA 6 HOH A 103 803 17 HOH HOH . 
AA 6 HOH A 104 804 145 HOH HOH . 
AA 6 HOH A 105 805 100 HOH HOH . 
AA 6 HOH A 106 806 3 HOH HOH . 
AA 6 HOH A 107 807 83 HOH HOH . 
AA 6 HOH A 108 808 9 HOH HOH . 
AA 6 HOH A 109 809 205 HOH HOH . 
AA 6 HOH A 110 810 130 HOH HOH . 
AA 6 HOH A 111 811 39 HOH HOH . 
AA 6 HOH A 112 812 192 HOH HOH . 
AA 6 HOH A 113 813 78 HOH HOH . 
AA 6 HOH A 114 814 77 HOH HOH . 
AA 6 HOH A 115 815 231 HOH HOH . 
AA 6 HOH A 116 816 190 HOH HOH . 
AA 6 HOH A 117 817 48 HOH HOH . 
AA 6 HOH A 118 818 132 HOH HOH . 
AA 6 HOH A 119 819 131 HOH HOH . 
AA 6 HOH A 120 820 137 HOH HOH . 
AA 6 HOH A 121 821 45 HOH HOH . 
AA 6 HOH A 122 822 42 HOH HOH . 
AA 6 HOH A 123 823 53 HOH HOH . 
AA 6 HOH A 124 824 177 HOH HOH . 
AA 6 HOH A 125 825 51 HOH HOH . 
BA 6 HOH B 1 701 225 HOH HOH . 
BA 6 HOH B 2 702 158 HOH HOH . 
BA 6 HOH B 3 703 46 HOH HOH . 
BA 6 HOH B 4 704 35 HOH HOH . 
BA 6 HOH B 5 705 232 HOH HOH . 
BA 6 HOH B 6 706 95 HOH HOH . 
BA 6 HOH B 7 707 235 HOH HOH . 
BA 6 HOH B 8 708 210 HOH HOH . 
BA 6 HOH B 9 709 187 HOH HOH . 
BA 6 HOH B 10 710 127 HOH HOH . 
BA 6 HOH B 11 711 107 HOH HOH . 
BA 6 HOH B 12 712 181 HOH HOH . 
BA 6 HOH B 13 713 106 HOH HOH . 
BA 6 HOH B 14 714 208 HOH HOH . 
BA 6 HOH B 15 715 166 HOH HOH . 
BA 6 HOH B 16 716 199 HOH HOH . 
BA 6 HOH B 17 717 194 HOH HOH . 
BA 6 HOH B 18 718 120 HOH HOH . 
BA 6 HOH B 19 719 22 HOH HOH . 
BA 6 HOH B 20 720 167 HOH HOH . 
BA 6 HOH B 21 721 178 HOH HOH . 
BA 6 HOH B 22 722 191 HOH HOH . 
BA 6 HOH B 23 723 31 HOH HOH . 
BA 6 HOH B 24 724 108 HOH HOH . 
BA 6 HOH B 25 725 11 HOH HOH . 
BA 6 HOH B 26 726 197 HOH HOH . 
BA 6 HOH B 27 727 147 HOH HOH . 
BA 6 HOH B 28 728 57 HOH HOH . 
BA 6 HOH B 29 729 135 HOH HOH . 
BA 6 HOH B 30 730 159 HOH HOH . 
BA 6 HOH B 31 731 14 HOH HOH . 
BA 6 HOH B 32 732 133 HOH HOH . 
BA 6 HOH B 33 733 15 HOH HOH . 
BA 6 HOH B 34 734 227 HOH HOH . 
BA 6 HOH B 35 735 16 HOH HOH . 
BA 6 HOH B 36 736 55 HOH HOH . 
BA 6 HOH B 37 737 163 HOH HOH . 
BA 6 HOH B 38 738 71 HOH HOH . 
BA 6 HOH B 39 739 72 HOH HOH . 
BA 6 HOH B 40 740 200 HOH HOH . 
BA 6 HOH B 41 741 233 HOH HOH . 
BA 6 HOH B 42 742 94 HOH HOH . 
BA 6 HOH B 43 743 168 HOH HOH . 
BA 6 HOH B 44 744 7 HOH HOH . 
BA 6 HOH B 45 745 174 HOH HOH . 
BA 6 HOH B 46 746 162 HOH HOH . 
BA 6 HOH B 47 747 26 HOH HOH . 
BA 6 HOH B 48 748 23 HOH HOH . 
BA 6 HOH B 49 749 59 HOH HOH . 
BA 6 HOH B 50 750 56 HOH HOH . 
BA 6 HOH B 51 751 101 HOH HOH . 
BA 6 HOH B 52 752 228 HOH HOH . 
BA 6 HOH B 53 753 34 HOH HOH . 
BA 6 HOH B 54 754 155 HOH HOH . 
BA 6 HOH B 55 755 170 HOH HOH . 
BA 6 HOH B 56 756 36 HOH HOH . 
BA 6 HOH B 57 757 230 HOH HOH . 
BA 6 HOH B 58 758 105 HOH HOH . 
BA 6 HOH B 59 759 176 HOH HOH . 
BA 6 HOH B 60 760 189 HOH HOH . 
BA 6 HOH B 61 761 96 HOH HOH . 
BA 6 HOH B 62 762 239 HOH HOH . 
BA 6 HOH B 63 763 109 HOH HOH . 
BA 6 HOH B 64 764 215 HOH HOH . 
BA 6 HOH B 65 765 212 HOH HOH . 
BA 6 HOH B 66 766 184 HOH HOH . 
BA 6 HOH B 67 767 172 HOH HOH . 
BA 6 HOH B 68 768 179 HOH HOH . 
BA 6 HOH B 69 769 224 HOH HOH . 
BA 6 HOH B 70 770 102 HOH HOH . 
BA 6 HOH B 71 771 103 HOH HOH . 
BA 6 HOH B 72 772 226 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . K 3 -4.974 -64.147 -11.814 1 79.41 ? C1 GOL 609 A 1 
HETATM 2 O O1 GOL . . . K 3 -5.52 -64.026 -10.489 1 69.1 ? O1 GOL 609 A 1 
HETATM 3 C C2 GOL . . . K 3 -5.547 -63.052 -12.744 1 74.59 ? C2 GOL 609 A 1 
HETATM 4 O O2 GOL . . . K 3 -6.37 -63.678 -13.727 1 86.56 ? O2 GOL 609 A 1 
HETATM 5 C C3 GOL . . . K 3 -4.488 -62.297 -13.536 1 64.89 ? C3 GOL 609 A 1 
HETATM 6 O O3 GOL . . . K 3 -3.449 -61.885 -12.643 1 65.21 ? O3 GOL 609 A 1 
#
_model_server_stats.io_time_ms              67 
_model_server_stats.parse_time_ms           18 
_model_server_stats.create_model_time_ms    17 
_model_server_stats.query_time_ms           291 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           6 
#