data_6H53 # _model_server_result.job_id uNQD3UVWmSQzBcWSNko8Yw _model_server_result.datetime_utc '2024-11-21 14:10:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6h53 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":303}' # _entry.id 6H53 # _exptl.entry_id 6H53 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 478.92 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'UNKNOWN BRANCHED FRAGMENT OF PHOSPHOLIPID' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6H53 _cell.length_a 69.726 _cell.length_b 72.896 _cell.length_c 102.452 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6H53 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 J N N ? 3 K N N # _chem_comp.formula 'C34 H70' _chem_comp.formula_weight 478.92 _chem_comp.id UPL _chem_comp.mon_nstd_flag . _chem_comp.name 'UNKNOWN BRANCHED FRAGMENT OF PHOSPHOLIPID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'UNKNOWN PHOSPHOLIPID FRAGMENT' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 UPL sing 344 n n C1 H11 UPL sing 345 n n C1 H12 UPL sing 346 n n C1 H13 UPL sing 347 n n C2 C3 UPL sing 348 n n C2 H21 UPL sing 349 n n C2 H22 UPL sing 350 n n C3 C4 UPL sing 351 n n C3 H31 UPL sing 352 n n C3 H32 UPL sing 353 n n C4 C5 UPL sing 354 n n C4 H41 UPL sing 355 n n C4 H42 UPL sing 356 n n C5 C6 UPL sing 357 n n C5 H51 UPL sing 358 n n C5 H52 UPL sing 359 n n C6 C7 UPL sing 360 n n C6 H61 UPL sing 361 n n C6 H62 UPL sing 362 n n C7 C8 UPL sing 363 n n C7 H71 UPL sing 364 n n C7 H72 UPL sing 365 n n C8 C9 UPL sing 366 n n C8 H81 UPL sing 367 n n C8 H82 UPL sing 368 n n C9 C10 UPL sing 369 n n C9 H91 UPL sing 370 n n C9 H92 UPL sing 371 n n C10 C11 UPL sing 372 n n C10 H101 UPL sing 373 n n C10 H102 UPL sing 374 n n C11 C12 UPL sing 375 n n C11 H111 UPL sing 376 n n C11 H112 UPL sing 377 n n C12 C13 UPL sing 378 n n C12 C26 UPL sing 379 n n C12 H121 UPL sing 380 n n C13 C14 UPL sing 381 n n C13 H131 UPL sing 382 n n C13 H132 UPL sing 383 n n C14 C15 UPL sing 384 n n C14 H141 UPL sing 385 n n C14 H142 UPL sing 386 n n C15 C16 UPL sing 387 n n C15 H151 UPL sing 388 n n C15 H152 UPL sing 389 n n C16 C17 UPL sing 390 n n C16 H161 UPL sing 391 n n C16 H162 UPL sing 392 n n C17 C18 UPL sing 393 n n C17 H171 UPL sing 394 n n C17 H172 UPL sing 395 n n C18 C19 UPL sing 396 n n C18 H181 UPL sing 397 n n C18 H182 UPL sing 398 n n C19 C20 UPL sing 399 n n C19 H191 UPL sing 400 n n C19 H192 UPL sing 401 n n C20 C21 UPL sing 402 n n C20 H201 UPL sing 403 n n C20 H202 UPL sing 404 n n C21 C22 UPL sing 405 n n C21 H211 UPL sing 406 n n C21 H212 UPL sing 407 n n C22 C23 UPL sing 408 n n C22 H221 UPL sing 409 n n C22 H222 UPL sing 410 n n C23 C24 UPL sing 411 n n C23 H231 UPL sing 412 n n C23 H232 UPL sing 413 n n C24 C25 UPL sing 414 n n C24 H241 UPL sing 415 n n C24 H242 UPL sing 416 n n C25 H251 UPL sing 417 n n C25 H252 UPL sing 418 n n C25 H253 UPL sing 419 n n C26 C27 UPL sing 420 n n C26 H261 UPL sing 421 n n C26 H262 UPL sing 422 n n C27 C28 UPL sing 423 n n C27 H271 UPL sing 424 n n C27 H272 UPL sing 425 n n C28 C29 UPL sing 426 n n C28 H281 UPL sing 427 n n C28 H282 UPL sing 428 n n C29 C30 UPL sing 429 n n C29 H291 UPL sing 430 n n C29 H292 UPL sing 431 n n C30 C31 UPL sing 432 n n C30 H301 UPL sing 433 n n C30 H302 UPL sing 434 n n C31 C32 UPL sing 435 n n C31 H311 UPL sing 436 n n C31 H312 UPL sing 437 n n C32 C33 UPL sing 438 n n C32 H321 UPL sing 439 n n C32 H322 UPL sing 440 n n C33 C34 UPL sing 441 n n C33 H331 UPL sing 442 n n C33 H332 UPL sing 443 n n C34 H341 UPL sing 444 n n C34 H342 UPL sing 445 n n C34 H343 UPL sing 446 n n # _atom_sites.entry_id 6H53 _atom_sites.fract_transf_matrix[1][1] 0.014342 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013718 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009761 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 301 210 SO4 SO4 . D 3 UPL A 1 302 211 UPL 13C . E 3 UPL A 1 303 212 UPL 13C . F 3 UPL A 1 304 213 UPL 14C . G 3 UPL A 1 305 214 UPL 14C . H 2 SO4 A 1 306 211 SO4 SO4 . I 2 SO4 B 1 301 210 SO4 SO4 . J 3 UPL B 1 302 212 UPL 14C . K 3 UPL B 1 303 213 UPL 14C . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C16 UPL . . . E 3 -34.663 7.26 7.124 1 46.59 ? C16 UPL 303 A 1 HETATM 2 C C17 UPL . . . E 3 -33.832 7.078 5.864 1 50.77 ? C17 UPL 303 A 1 HETATM 3 C C18 UPL . . . E 3 -33.8 8.287 4.941 1 45.69 ? C18 UPL 303 A 1 HETATM 4 C C19 UPL . . . E 3 -34.067 7.927 3.486 1 49.43 ? C19 UPL 303 A 1 HETATM 5 C C20 UPL . . . E 3 -33.243 8.734 2.502 1 43.04 ? C20 UPL 303 A 1 HETATM 6 C C21 UPL . . . E 3 -33.781 8.686 1.085 1 50.91 ? C21 UPL 303 A 1 HETATM 7 C C22 UPL . . . E 3 -33.412 9.913 0.271 1 47.45 ? C22 UPL 303 A 1 HETATM 8 H H162 UPL . . . E 3 -35.588 7.451 6.879 1 57.29 ? H162 UPL 303 A 1 HETATM 9 H H171 UPL . . . E 3 -34.192 6.32 5.366 1 62.31 ? H171 UPL 303 A 1 HETATM 10 H H172 UPL . . . E 3 -32.917 6.868 6.128 1 62.31 ? H172 UPL 303 A 1 HETATM 11 H H181 UPL . . . E 3 -34.476 8.926 5.236 1 56.22 ? H181 UPL 303 A 1 HETATM 12 H H182 UPL . . . E 3 -32.921 8.707 5.004 1 56.22 ? H182 UPL 303 A 1 HETATM 13 H H191 UPL . . . E 3 -33.867 6.981 3.357 1 60.7 ? H191 UPL 303 A 1 HETATM 14 H H192 UPL . . . E 3 -35.013 8.076 3.296 1 60.7 ? H192 UPL 303 A 1 HETATM 15 H H201 UPL . . . E 3 -33.226 9.664 2.798 1 53.03 ? H201 UPL 303 A 1 HETATM 16 H H202 UPL . . . E 3 -32.331 8.389 2.502 1 53.03 ? H202 UPL 303 A 1 HETATM 17 H H211 UPL . . . E 3 -34.753 8.613 1.121 1 62.47 ? H211 UPL 303 A 1 HETATM 18 H H212 UPL . . . E 3 -33.422 7.895 0.64 1 62.47 ? H212 UPL 303 A 1 HETATM 19 H H221 UPL . . . E 3 -33.782 9.83 -0.628 1 58.32 ? H221 UPL 303 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 240 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 19 #