data_6H53
#
_model_server_result.job_id            y9ttGsEuuklxWdfc8Ace8A 
_model_server_result.datetime_utc      '2024-11-21 13:41:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6h53 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":305}' 
#
_entry.id    6H53 
#
_exptl.entry_id    6H53 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              478.92 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'UNKNOWN BRANCHED FRAGMENT OF PHOSPHOLIPID' 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6H53 
_cell.length_a            69.726 
_cell.length_b            72.896 
_cell.length_c            102.452 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6H53 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 J N N 
? 3 K N N 
#
_chem_comp.formula           'C34 H70' 
_chem_comp.formula_weight    478.92 
_chem_comp.id                UPL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'UNKNOWN BRANCHED FRAGMENT OF PHOSPHOLIPID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'UNKNOWN PHOSPHOLIPID FRAGMENT' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 UPL sing 344 n n 
C1 H11 UPL sing 345 n n 
C1 H12 UPL sing 346 n n 
C1 H13 UPL sing 347 n n 
C2 C3 UPL sing 348 n n 
C2 H21 UPL sing 349 n n 
C2 H22 UPL sing 350 n n 
C3 C4 UPL sing 351 n n 
C3 H31 UPL sing 352 n n 
C3 H32 UPL sing 353 n n 
C4 C5 UPL sing 354 n n 
C4 H41 UPL sing 355 n n 
C4 H42 UPL sing 356 n n 
C5 C6 UPL sing 357 n n 
C5 H51 UPL sing 358 n n 
C5 H52 UPL sing 359 n n 
C6 C7 UPL sing 360 n n 
C6 H61 UPL sing 361 n n 
C6 H62 UPL sing 362 n n 
C7 C8 UPL sing 363 n n 
C7 H71 UPL sing 364 n n 
C7 H72 UPL sing 365 n n 
C8 C9 UPL sing 366 n n 
C8 H81 UPL sing 367 n n 
C8 H82 UPL sing 368 n n 
C9 C10 UPL sing 369 n n 
C9 H91 UPL sing 370 n n 
C9 H92 UPL sing 371 n n 
C10 C11 UPL sing 372 n n 
C10 H101 UPL sing 373 n n 
C10 H102 UPL sing 374 n n 
C11 C12 UPL sing 375 n n 
C11 H111 UPL sing 376 n n 
C11 H112 UPL sing 377 n n 
C12 C13 UPL sing 378 n n 
C12 C26 UPL sing 379 n n 
C12 H121 UPL sing 380 n n 
C13 C14 UPL sing 381 n n 
C13 H131 UPL sing 382 n n 
C13 H132 UPL sing 383 n n 
C14 C15 UPL sing 384 n n 
C14 H141 UPL sing 385 n n 
C14 H142 UPL sing 386 n n 
C15 C16 UPL sing 387 n n 
C15 H151 UPL sing 388 n n 
C15 H152 UPL sing 389 n n 
C16 C17 UPL sing 390 n n 
C16 H161 UPL sing 391 n n 
C16 H162 UPL sing 392 n n 
C17 C18 UPL sing 393 n n 
C17 H171 UPL sing 394 n n 
C17 H172 UPL sing 395 n n 
C18 C19 UPL sing 396 n n 
C18 H181 UPL sing 397 n n 
C18 H182 UPL sing 398 n n 
C19 C20 UPL sing 399 n n 
C19 H191 UPL sing 400 n n 
C19 H192 UPL sing 401 n n 
C20 C21 UPL sing 402 n n 
C20 H201 UPL sing 403 n n 
C20 H202 UPL sing 404 n n 
C21 C22 UPL sing 405 n n 
C21 H211 UPL sing 406 n n 
C21 H212 UPL sing 407 n n 
C22 C23 UPL sing 408 n n 
C22 H221 UPL sing 409 n n 
C22 H222 UPL sing 410 n n 
C23 C24 UPL sing 411 n n 
C23 H231 UPL sing 412 n n 
C23 H232 UPL sing 413 n n 
C24 C25 UPL sing 414 n n 
C24 H241 UPL sing 415 n n 
C24 H242 UPL sing 416 n n 
C25 H251 UPL sing 417 n n 
C25 H252 UPL sing 418 n n 
C25 H253 UPL sing 419 n n 
C26 C27 UPL sing 420 n n 
C26 H261 UPL sing 421 n n 
C26 H262 UPL sing 422 n n 
C27 C28 UPL sing 423 n n 
C27 H271 UPL sing 424 n n 
C27 H272 UPL sing 425 n n 
C28 C29 UPL sing 426 n n 
C28 H281 UPL sing 427 n n 
C28 H282 UPL sing 428 n n 
C29 C30 UPL sing 429 n n 
C29 H291 UPL sing 430 n n 
C29 H292 UPL sing 431 n n 
C30 C31 UPL sing 432 n n 
C30 H301 UPL sing 433 n n 
C30 H302 UPL sing 434 n n 
C31 C32 UPL sing 435 n n 
C31 H311 UPL sing 436 n n 
C31 H312 UPL sing 437 n n 
C32 C33 UPL sing 438 n n 
C32 H321 UPL sing 439 n n 
C32 H322 UPL sing 440 n n 
C33 C34 UPL sing 441 n n 
C33 H331 UPL sing 442 n n 
C33 H332 UPL sing 443 n n 
C34 H341 UPL sing 444 n n 
C34 H342 UPL sing 445 n n 
C34 H343 UPL sing 446 n n 
#
_atom_sites.entry_id                     6H53 
_atom_sites.fract_transf_matrix[1][1]    0.014342 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013718 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009761 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SO4 A 1 301 210 SO4 SO4 . 
D 3 UPL A 1 302 211 UPL 13C . 
E 3 UPL A 1 303 212 UPL 13C . 
F 3 UPL A 1 304 213 UPL 14C . 
G 3 UPL A 1 305 214 UPL 14C . 
H 2 SO4 A 1 306 211 SO4 SO4 . 
I 2 SO4 B 1 301 210 SO4 SO4 . 
J 3 UPL B 1 302 212 UPL 14C . 
K 3 UPL B 1 303 213 UPL 14C . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 UPL . . . G 3 -0.175 14.665 0.687 1 52.16 ? C1 UPL 305 A 1 
HETATM 2 C C2 UPL . . . G 3 0.181 13.628 1.73 1 49.11 ? C2 UPL 305 A 1 
HETATM 3 C C3 UPL . . . G 3 -0.709 13.73 2.946 1 58.78 ? C3 UPL 305 A 1 
HETATM 4 C C4 UPL . . . G 3 0.022 13.801 4.275 1 62.89 ? C4 UPL 305 A 1 
HETATM 5 C C5 UPL . . . G 3 -0.639 14.781 5.219 1 52.87 ? C5 UPL 305 A 1 
HETATM 6 C C6 UPL . . . G 3 -0.062 14.699 6.609 1 52.77 ? C6 UPL 305 A 1 
HETATM 7 C C7 UPL . . . G 3 -0.241 15.978 7.403 1 55.54 ? C7 UPL 305 A 1 
HETATM 8 C C8 UPL . . . G 3 0.347 15.837 8.789 1 46.35 ? C8 UPL 305 A 1 
HETATM 9 C C9 UPL . . . G 3 -0.279 16.749 9.81 1 46.07 ? C9 UPL 305 A 1 
HETATM 10 C C10 UPL . . . G 3 -0.019 16.248 11.219 1 54.56 ? C10 UPL 305 A 1 
HETATM 11 C C11 UPL . . . G 3 -1.103 16.74 12.143 1 58.03 ? C11 UPL 305 A 1 
HETATM 12 C C12 UPL . . . G 3 -2.12 15.688 12.533 1 63.48 ? C12 UPL 305 A 1 
HETATM 13 C C13 UPL . . . G 3 -3.551 16.198 12.44 1 57.1 ? C13 UPL 305 A 1 
HETATM 14 C C14 UPL . . . G 3 -4.426 15.717 13.573 1 60.73 ? C14 UPL 305 A 1 
HETATM 15 H H11 UPL . . . G 3 -1.086 14.51 0.372 1 63.97 ? H11 UPL 305 A 1 
HETATM 16 H H12 UPL . . . G 3 -0.114 15.556 1.079 1 63.97 ? H12 UPL 305 A 1 
HETATM 17 H H13 UPL . . . G 3 0.444 14.597 -0.065 1 63.97 ? H13 UPL 305 A 1 
HETATM 18 H H21 UPL . . . G 3 1.109 13.758 2.003 1 60.32 ? H21 UPL 305 A 1 
HETATM 19 H H22 UPL . . . G 3 0.086 12.739 1.34 1 60.32 ? H22 UPL 305 A 1 
HETATM 20 H H31 UPL . . . G 3 -1.261 14.53 2.856 1 71.92 ? H31 UPL 305 A 1 
HETATM 21 H H32 UPL . . . G 3 -1.297 12.951 2.962 1 71.92 ? H32 UPL 305 A 1 
HETATM 22 H H41 UPL . . . G 3 0.943 14.083 4.117 1 76.85 ? H41 UPL 305 A 1 
HETATM 23 H H42 UPL . . . G 3 0.025 12.916 4.685 1 76.85 ? H42 UPL 305 A 1 
HETATM 24 H H51 UPL . . . G 3 -0.514 15.686 4.877 1 64.83 ? H51 UPL 305 A 1 
HETATM 25 H H52 UPL . . . G 3 -1.595 14.586 5.26 1 64.83 ? H52 UPL 305 A 1 
HETATM 26 H H61 UPL . . . G 3 -0.5 13.969 7.087 1 64.71 ? H61 UPL 305 A 1 
HETATM 27 H H62 UPL . . . G 3 0.891 14.502 6.541 1 64.71 ? H62 UPL 305 A 1 
HETATM 28 H H71 UPL . . . G 3 -1.193 16.18 7.477 1 68.03 ? H71 UPL 305 A 1 
HETATM 29 H H72 UPL . . . G 3 0.207 16.71 6.937 1 68.03 ? H72 UPL 305 A 1 
HETATM 30 H H81 UPL . . . G 3 1.303 16.032 8.742 1 57.01 ? H81 UPL 305 A 1 
HETATM 31 H H82 UPL . . . G 3 0.231 14.914 9.083 1 57.01 ? H82 UPL 305 A 1 
HETATM 32 H H92 UPL . . . G 3 -1.243 16.788 9.656 1 56.67 ? H92 UPL 305 A 1 
HETATM 33 H H101 UPL . . . G 3 -0.011 15.272 11.22 1 66.86 ? H101 UPL 305 A 1 
HETATM 34 H H102 UPL . . . G 3 0.845 16.58 11.527 1 66.86 ? H102 UPL 305 A 1 
HETATM 35 H H111 UPL . . . G 3 -0.684 17.081 12.956 1 71.02 ? H111 UPL 305 A 1 
HETATM 36 H H112 UPL . . . G 3 -1.571 17.476 11.705 1 71.02 ? H112 UPL 305 A 1 
HETATM 37 H H121 UPL . . . G 3 -1.946 15.405 13.45 1 77.56 ? H121 UPL 305 A 1 
HETATM 38 H H131 UPL . . . G 3 -3.937 15.897 11.596 1 69.91 ? H131 UPL 305 A 1 
HETATM 39 H H132 UPL . . . G 3 -3.536 17.174 12.448 1 69.91 ? H132 UPL 305 A 1 
HETATM 40 H H141 UPL . . . G 3 -5.317 16.105 13.483 1 74.26 ? H141 UPL 305 A 1 
HETATM 41 H H142 UPL . . . G 3 -4.49 14.743 13.543 1 74.26 ? H142 UPL 305 A 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    35 
_model_server_stats.query_time_ms           320 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           41 
#