data_6H5A # _model_server_result.job_id pLIP7cI0PtE2w5ju-G-iXw _model_server_result.datetime_utc '2024-11-04 23:37:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6h5a # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 6H5A # _exptl.entry_id 6H5A _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6H5A _cell.length_a 68.067 _cell.length_b 77.941 _cell.length_c 100.823 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6H5A _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 M N N ? 2 N N N ? 2 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ASP 68 A ASP 68 1_555 C MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? metalc ? metalc2 A OD1 ASP 68 A ASP 68 1_555 C MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? metalc ? metalc3 A OD1 ASP 68 A ASP 68 1_555 D MN MN . A MN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.605 ? metalc ? metalc4 A OD2 ASP 68 A ASP 68 1_555 D MN MN . A MN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? metalc ? metalc5 A OD1 ASP 71 A ASP 71 1_555 C MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? metalc ? metalc6 A OD2 ASP 89 A ASP 89 1_555 C MN MN . A MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? metalc ? metalc7 A OD1 ASP 89 A ASP 89 1_555 D MN MN . A MN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? metalc ? metalc8 A OD1 ASP 93 A ASP 93 1_555 D MN MN . A MN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.544 ? metalc ? metalc9 A OD2 ASP 93 A ASP 93 1_555 D MN MN . A MN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? metalc ? metalc10 C MN MN . A MN 301 1_555 W O HOH . A HOH 440 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? metalc ? metalc11 C MN MN . A MN 301 1_555 W O HOH . A HOH 445 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? metalc ? metalc12 D MN MN . A MN 302 1_555 G OA2 FLC . A FLC 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? metalc ? metalc13 E MN MN . A MN 303 1_555 F MN MN . A MN 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.809 ? metalc ? metalc14 E MN MN . A MN 303 1_555 G OHB FLC . A FLC 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc15 E MN MN . A MN 303 1_555 G OA2 FLC . A FLC 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.521 ? metalc ? metalc16 E MN MN . A MN 303 1_555 H OA2 FLC . A FLC 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? metalc ? metalc17 E MN MN . A MN 303 1_555 H OHB FLC . A FLC 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.911 ? metalc ? metalc18 E MN MN . A MN 303 1_555 W O HOH . A HOH 427 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc19 E MN MN . A MN 303 1_555 W O HOH . A HOH 464 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc20 F MN MN . A MN 304 1_555 G OG2 FLC . A FLC 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? metalc ? metalc21 F MN MN . A MN 304 1_555 G OHB FLC . A FLC 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.907 ? metalc ? metalc22 F MN MN . A MN 304 1_555 G OB1 FLC . A FLC 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? metalc ? metalc23 F MN MN . A MN 304 1_555 H OB2 FLC . A FLC 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? metalc ? metalc24 F MN MN . A MN 304 1_555 H OG1 FLC . A FLC 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? metalc ? metalc25 F MN MN . A MN 304 1_555 H OHB FLC . A FLC 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.971 ? metalc ? metalc26 B O ASP 68 B ASP 68 1_555 N MN MN . B MN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? metalc ? metalc27 B OD1 ASP 68 B ASP 68 1_555 N MN MN . B MN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc28 B OD2 ASP 68 B ASP 68 1_555 O MN MN . B MN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? metalc ? metalc29 B OD1 ASP 71 B ASP 71 1_555 N MN MN . B MN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? metalc ? metalc30 B OD2 ASP 89 B ASP 89 1_555 N MN MN . B MN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? metalc ? metalc31 B OD1 ASP 89 B ASP 89 1_555 O MN MN . B MN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? metalc ? metalc32 B OD1 ASP 93 B ASP 93 1_555 O MN MN . B MN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc33 B OD2 ASP 93 B ASP 93 1_555 O MN MN . B MN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc34 B OE1 GLU 151 B GLU 151 1_555 M MN MN . B MN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? metalc ? metalc35 M MN MN . B MN 301 1_555 P OA2 FLC . B FLC 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? metalc ? metalc36 M MN MN . B MN 301 1_555 P OHB FLC . B FLC 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? metalc ? metalc37 M MN MN . B MN 301 1_555 P OB1 FLC . B FLC 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc38 M MN MN . B MN 301 1_555 X O HOH . B HOH 441 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? metalc ? metalc39 N MN MN . B MN 302 1_555 X O HOH . B HOH 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.193 ? metalc ? metalc40 O MN MN . B MN 303 1_555 X O HOH . B HOH 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? metalc ? metalc41 O MN MN . B MN 303 1_555 X O HOH . B HOH 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.189 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6H5A _atom_sites.fract_transf_matrix[1][1] 0.014691 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01283 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009918 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MN A 1 301 211 MN MN . D 2 MN A 1 302 212 MN MN . E 2 MN A 1 303 213 MN MN . F 2 MN A 1 304 214 MN MN . G 3 FLC A 1 305 215 FLC FLC . H 3 FLC A 1 306 216 FLC FLC . I 4 OLC A 1 307 217 OLC OLC . J 4 OLC A 1 308 218 OLC OLC . K 5 LFA A 1 309 219 LFA LFA . L 5 LFA A 1 310 230 LFA LFA . M 2 MN B 1 301 224 MN MN . N 2 MN B 1 302 225 MN MN . O 2 MN B 1 303 226 MN MN . P 3 FLC B 1 304 227 FLC FLC . Q 4 OLC B 1 305 228 OLC OLC . R 6 SO4 B 1 306 229 SO4 SO4 . S 5 LFA B 1 307 231 LFA LFA . T 7 1PE B 1 308 232 1PE 1PE . U 7 1PE B 1 309 233 1PE 1PE . V 5 LFA B 1 310 234 LFA 13C . W 8 HOH A 1 401 287 HOH HOH . W 8 HOH A 2 402 234 HOH HOH . W 8 HOH A 3 403 258 HOH HOH . W 8 HOH A 4 404 260 HOH HOH . W 8 HOH A 5 405 255 HOH HOH . W 8 HOH A 6 406 224 HOH HOH . W 8 HOH A 7 407 273 HOH HOH . W 8 HOH A 8 408 268 HOH HOH . W 8 HOH A 9 409 277 HOH HOH . W 8 HOH A 10 410 276 HOH HOH . W 8 HOH A 11 411 284 HOH HOH . W 8 HOH A 12 412 286 HOH HOH . W 8 HOH A 13 413 248 HOH HOH . W 8 HOH A 14 414 264 HOH HOH . W 8 HOH A 15 415 243 HOH HOH . W 8 HOH A 16 416 275 HOH HOH . W 8 HOH A 17 417 255 HOH HOH . W 8 HOH A 18 418 244 HOH HOH . W 8 HOH A 19 419 229 HOH HOH . W 8 HOH A 20 420 242 HOH HOH . W 8 HOH A 21 421 254 HOH HOH . W 8 HOH A 22 422 245 HOH HOH . W 8 HOH A 23 423 231 HOH HOH . W 8 HOH A 24 424 249 HOH HOH . W 8 HOH A 25 425 265 HOH HOH . W 8 HOH A 26 426 238 HOH HOH . W 8 HOH A 27 427 227 HOH HOH . W 8 HOH A 28 428 267 HOH HOH . W 8 HOH A 29 429 271 HOH HOH . W 8 HOH A 30 430 230 HOH HOH . W 8 HOH A 31 431 266 HOH HOH . W 8 HOH A 32 432 223 HOH HOH . W 8 HOH A 33 433 225 HOH HOH . W 8 HOH A 34 434 250 HOH HOH . W 8 HOH A 35 435 237 HOH HOH . W 8 HOH A 36 436 278 HOH HOH . W 8 HOH A 37 437 226 HOH HOH . W 8 HOH A 38 438 235 HOH HOH . W 8 HOH A 39 439 283 HOH HOH . W 8 HOH A 40 440 228 HOH HOH . W 8 HOH A 41 441 232 HOH HOH . W 8 HOH A 42 442 236 HOH HOH . W 8 HOH A 43 443 233 HOH HOH . W 8 HOH A 44 444 220 HOH HOH . W 8 HOH A 45 445 222 HOH HOH . W 8 HOH A 46 446 251 HOH HOH . W 8 HOH A 47 447 261 HOH HOH . W 8 HOH A 48 448 269 HOH HOH . W 8 HOH A 49 449 270 HOH HOH . W 8 HOH A 50 450 246 HOH HOH . W 8 HOH A 51 451 247 HOH HOH . W 8 HOH A 52 452 262 HOH HOH . W 8 HOH A 53 453 239 HOH HOH . W 8 HOH A 54 454 263 HOH HOH . W 8 HOH A 55 455 258 HOH HOH . W 8 HOH A 56 456 279 HOH HOH . W 8 HOH A 57 457 259 HOH HOH . W 8 HOH A 58 458 281 HOH HOH . W 8 HOH A 59 459 280 HOH HOH . W 8 HOH A 60 460 252 HOH HOH . W 8 HOH A 61 461 256 HOH HOH . W 8 HOH A 62 462 240 HOH HOH . W 8 HOH A 63 463 272 HOH HOH . W 8 HOH A 64 464 236 HOH HOH . W 8 HOH A 65 465 274 HOH HOH . W 8 HOH A 66 466 221 HOH HOH . W 8 HOH A 67 467 257 HOH HOH . W 8 HOH A 68 468 253 HOH HOH . W 8 HOH A 69 469 282 HOH HOH . W 8 HOH A 70 470 285 HOH HOH . X 8 HOH B 1 401 247 HOH HOH . X 8 HOH B 2 402 292 HOH HOH . X 8 HOH B 3 403 241 HOH HOH . X 8 HOH B 4 404 278 HOH HOH . X 8 HOH B 5 405 275 HOH HOH . X 8 HOH B 6 406 285 HOH HOH . X 8 HOH B 7 407 269 HOH HOH . X 8 HOH B 8 408 264 HOH HOH . X 8 HOH B 9 409 250 HOH HOH . X 8 HOH B 10 410 246 HOH HOH . X 8 HOH B 11 411 262 HOH HOH . X 8 HOH B 12 412 261 HOH HOH . X 8 HOH B 13 413 256 HOH HOH . X 8 HOH B 14 414 273 HOH HOH . X 8 HOH B 15 415 244 HOH HOH . X 8 HOH B 16 416 252 HOH HOH . X 8 HOH B 17 417 235 HOH HOH . X 8 HOH B 18 418 242 HOH HOH . X 8 HOH B 19 419 241 HOH HOH . X 8 HOH B 20 420 251 HOH HOH . X 8 HOH B 21 421 266 HOH HOH . X 8 HOH B 22 422 243 HOH HOH . X 8 HOH B 23 423 290 HOH HOH . X 8 HOH B 24 424 245 HOH HOH . X 8 HOH B 25 425 254 HOH HOH . X 8 HOH B 26 426 238 HOH HOH . X 8 HOH B 27 427 282 HOH HOH . X 8 HOH B 28 428 287 HOH HOH . X 8 HOH B 29 429 267 HOH HOH . X 8 HOH B 30 430 276 HOH HOH . X 8 HOH B 31 431 277 HOH HOH . X 8 HOH B 32 432 283 HOH HOH . X 8 HOH B 33 433 272 HOH HOH . X 8 HOH B 34 434 240 HOH HOH . X 8 HOH B 35 435 248 HOH HOH . X 8 HOH B 36 436 271 HOH HOH . X 8 HOH B 37 437 260 HOH HOH . X 8 HOH B 38 438 270 HOH HOH . X 8 HOH B 39 439 263 HOH HOH . X 8 HOH B 40 440 259 HOH HOH . X 8 HOH B 41 441 289 HOH HOH . X 8 HOH B 42 442 239 HOH HOH . X 8 HOH B 43 443 257 HOH HOH . X 8 HOH B 44 444 253 HOH HOH . X 8 HOH B 45 445 280 HOH HOH . X 8 HOH B 46 446 249 HOH HOH . X 8 HOH B 47 447 268 HOH HOH . X 8 HOH B 48 448 265 HOH HOH . X 8 HOH B 49 449 291 HOH HOH . X 8 HOH B 50 450 284 HOH HOH . X 8 HOH B 51 451 288 HOH HOH . X 8 HOH B 52 452 237 HOH HOH . X 8 HOH B 53 453 274 HOH HOH . X 8 HOH B 54 454 281 HOH HOH . X 8 HOH B 55 455 279 HOH HOH . X 8 HOH B 56 456 286 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x -26.744 _atom_site.Cartn_y 14.824 _atom_site.Cartn_z -38.412 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 27.32 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 302 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #