data_6H5B
#
_model_server_result.job_id            boAYcoWh-YUlys0dDAOjDg 
_model_server_result.datetime_utc      '2024-11-16 06:33:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6h5b 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":201}' 
#
_entry.id    6H5B 
#
_exptl.entry_id    6H5B 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              238.278 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PENTAETHYLENE GLYCOL' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6H5B 
_cell.length_a            135.101 
_cell.length_b            135.101 
_cell.length_c            60.382 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6H5B 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        172 
_symmetry.space_group_name_Hall    'P 64' 
_symmetry.space_group_name_H-M     'P 64' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,F,G,H,M 1 1 
B,I,J,N 2 1 
C,K,L,O 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 H N N 
? 6 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A NZ LYS 25 A LYS 25 1_555 D O2B GSP . A GSP 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.299 ? 
metalc ? metalc1 A OG1 THR 26 A THR 26 1_555 E MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? 
metalc ? metalc2 A OG1 THR 54 A THR 54 1_555 E MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? 
metalc ? metalc3 D O2G GSP . A GSP 301 1_555 E MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.998 ? 
metalc ? metalc4 D O1B GSP . A GSP 301 1_555 E MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.919 ? 
#
_chem_comp.formula           'C10 H22 O6' 
_chem_comp.formula_weight    238.278 
_chem_comp.id                1PE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PENTAETHYLENE GLYCOL' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     PEG400 
#
_atom_sites.entry_id                     6H5B 
_atom_sites.fract_transf_matrix[1][1]    0.007402 
_atom_sites.fract_transf_matrix[1][2]    0.004273 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008547 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016561 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 3 GSP A 1 301 301 GSP GSP . 
E 4 MG A 1 302 302 MG MG . 
F 5 EPE A 1 303 303 EPE EPE . 
G 5 EPE A 1 304 304 EPE EPE . 
H 6 1PE A 1 305 305 1PE 1PE . 
I 7 PEG B 1 201 201 PEG PEG . 
J 7 PEG B 1 202 201 PEG PEG . 
K 6 1PE C 1 201 306 1PE 1PE . 
L 7 PEG C 1 202 202 PEG PEG . 
M 8 HOH A 1 401 415 HOH HOH . 
M 8 HOH A 2 402 416 HOH HOH . 
M 8 HOH A 3 403 401 HOH HOH . 
M 8 HOH A 4 404 405 HOH HOH . 
M 8 HOH A 5 405 409 HOH HOH . 
M 8 HOH A 6 406 404 HOH HOH . 
M 8 HOH A 7 407 414 HOH HOH . 
M 8 HOH A 8 408 407 HOH HOH . 
M 8 HOH A 9 409 406 HOH HOH . 
N 8 HOH B 1 301 412 HOH HOH . 
N 8 HOH B 2 302 411 HOH HOH . 
N 8 HOH B 3 303 408 HOH HOH . 
O 8 HOH C 1 301 413 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O OH2 1PE . . . K 6 -36.002 -20.811 17.196 1 118.15 ? OH2 1PE 201 C 1 
HETATM 2 C C12 1PE . . . K 6 -35.309 -19.603 17.052 1 117.21 ? C12 1PE 201 C 1 
HETATM 3 C C22 1PE . . . K 6 -35.655 -18.648 18.195 1 111.32 ? C22 1PE 201 C 1 
HETATM 4 O OH3 1PE . . . K 6 -34.698 -17.623 18.248 1 111.5 ? OH3 1PE 201 C 1 
HETATM 5 C C13 1PE . . . K 6 -33.638 -17.073 16.149 1 113.01 ? C13 1PE 201 C 1 
HETATM 6 C C23 1PE . . . K 6 -34.736 -16.735 17.163 1 111.44 ? C23 1PE 201 C 1 
HETATM 7 O OH4 1PE . . . K 6 -34.178 -17.148 14.853 1 107.16 ? OH4 1PE 201 C 1 
HETATM 8 C C14 1PE . . . K 6 -32.77 -16.198 13.164 1 94.93 ? C14 1PE 201 C 1 
HETATM 9 C C24 1PE . . . K 6 -33.249 -17.473 13.853 1 102.04 ? C24 1PE 201 C 1 
HETATM 10 O OH5 1PE . . . K 6 -32.044 -15.441 14.09 1 92.48 ? OH5 1PE 201 C 1 
HETATM 11 C C15 1PE . . . K 6 -29.93 -14.438 13.621 1 87.33 ? C15 1PE 201 C 1 
HETATM 12 C C25 1PE . . . K 6 -31.45 -14.285 13.575 1 87.63 ? C25 1PE 201 C 1 
HETATM 13 O OH6 1PE . . . K 6 -29.331 -13.483 12.79 1 84.66 ? OH6 1PE 201 C 1 
HETATM 14 C C16 1PE . . . K 6 -29.314 -12.589 10.553 1 78.11 ? C16 1PE 201 C 1 
HETATM 15 C C26 1PE . . . K 6 -29.346 -13.837 11.435 1 82.84 ? C26 1PE 201 C 1 
HETATM 16 O OH7 1PE . . . K 6 -29.74 -12.936 9.261 1 74.14 ? OH7 1PE 201 C 1 
HETATM 17 H HO2 1PE . . . K 6 -35.67 -21.392 16.671 1 144.24 ? HO2 1PE 201 C 1 
HETATM 18 H H121 1PE . . . K 6 -34.355 -19.778 17.06 1 143.11 ? H121 1PE 201 C 1 
HETATM 19 H H122 1PE . . . K 6 -35.555 -19.192 16.208 1 143.11 ? H122 1PE 201 C 1 
HETATM 20 H H221 1PE . . . K 6 -35.655 -19.134 19.034 1 136.05 ? H221 1PE 201 C 1 
HETATM 21 H H222 1PE . . . K 6 -36.532 -18.264 18.043 1 136.05 ? H222 1PE 201 C 1 
HETATM 22 H H131 1PE . . . K 6 -33.24 -17.927 16.38 1 138.08 ? H131 1PE 201 C 1 
HETATM 23 H H132 1PE . . . K 6 -32.957 -16.382 16.172 1 138.08 ? H132 1PE 201 C 1 
HETATM 24 H H231 1PE . . . K 6 -34.603 -15.83 17.487 1 136.19 ? H231 1PE 201 C 1 
HETATM 25 H H232 1PE . . . K 6 -35.601 -16.799 16.729 1 136.19 ? H232 1PE 201 C 1 
HETATM 26 H H141 1PE . . . K 6 -33.534 -15.688 12.851 1 116.38 ? H141 1PE 201 C 1 
HETATM 27 H H142 1PE . . . K 6 -32.203 -16.426 12.411 1 116.38 ? H142 1PE 201 C 1 
HETATM 28 H H241 1PE . . . K 6 -32.492 -17.928 14.253 1 124.91 ? H241 1PE 201 C 1 
HETATM 29 H H242 1PE . . . K 6 -33.668 -18.055 13.2 1 124.91 ? H242 1PE 201 C 1 
HETATM 30 H H151 1PE . . . K 6 -29.622 -14.31 14.532 1 107.27 ? H151 1PE 201 C 1 
HETATM 31 H H152 1PE . . . K 6 -29.687 -15.327 13.319 1 107.27 ? H152 1PE 201 C 1 
HETATM 32 H H251 1PE . . . K 6 -31.735 -14.155 12.656 1 107.62 ? H251 1PE 201 C 1 
HETATM 33 H H252 1PE . . . K 6 -31.716 -13.518 14.107 1 107.62 ? H252 1PE 201 C 1 
HETATM 34 H H161 1PE . . . K 6 -28.41 -12.24 10.516 1 96.19 ? H161 1PE 201 C 1 
HETATM 35 H H162 1PE . . . K 6 -29.906 -11.915 10.922 1 96.19 ? H162 1PE 201 C 1 
HETATM 36 H H261 1PE . . . K 6 -28.571 -14.386 11.239 1 101.87 ? H261 1PE 201 C 1 
HETATM 37 H H262 1PE . . . K 6 -30.154 -14.341 11.246 1 101.87 ? H262 1PE 201 C 1 
HETATM 38 H HO7 1PE . . . K 6 -29.455 -12.359 8.705 1 91.43 ? HO7 1PE 201 C 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    24 
_model_server_stats.query_time_ms           262 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           38 
#