data_6H5O
#
_model_server_result.job_id            dMk8hijpxMMX5G0irIDe5Q 
_model_server_result.datetime_utc      '2024-11-02 02:18:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6h5o 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":702}' 
#
_entry.id    6H5O 
#
_exptl.entry_id    6H5O 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              112.411 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CADMIUM ION' 
_entity.pdbx_number_of_molecules    9 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6H5O 
_cell.length_a            80.713 
_cell.length_b            105.014 
_cell.length_c            185.624 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6H5O 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,J,K,N 1 1 
B,L,M,O 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 M N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A OG SER 377 A SER 403 1_555 C C01 JPP . A JPP 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.501 ? 
covale ? covale2 B OG SER 377 B SER 403 1_555 L C01 JPP . B JPP 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.515 ? 
metalc ? metalc1 A O GLY 109 A GLY 135 1_555 D CD CD . A CD 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? 
metalc ? metalc2 A ND1 HIS 117 A HIS 143 1_555 F CD CD . A CD 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.51 ? 
metalc ? metalc3 A OE1 GLU 119 A GLU 145 1_555 F CD CD . A CD 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.631 ? 
metalc ? metalc4 A OE2 GLU 119 A GLU 145 1_555 H CD CD . A CD 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.616 ? 
metalc ? metalc5 A OE2 GLU 119 A GLU 145 1_555 J CD CD . A CD 708 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.751 ? 
metalc ? metalc6 A OD2 ASP 183 A ASP 209 1_555 K CD CD . A CD 709 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.611 ? 
metalc ? metalc7 A NE2 HIS 285 A HIS 311 1_555 D CD CD . A CD 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.47 ? 
metalc ? metalc8 D CD CD . A CD 702 1_555 B OD1 ASP 183 B ASP 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? 
metalc ? metalc9 F CD CD . A CD 704 1_555 B OE1 GLU 119 B GLU 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.501 ? 
metalc ? metalc10 J CD CD . A CD 708 1_555 B ND1 HIS 117 B HIS 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.252 ? 
metalc ? metalc11 J CD CD . A CD 708 1_555 B OE2 GLU 119 B GLU 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? 
metalc ? metalc12 J CD CD . A CD 708 1_555 O O HOH . B HOH 812 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? 
metalc ? metalc13 K CD CD . A CD 709 1_555 B O GLY 109 B GLY 135 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? 
#
_chem_comp.formula           'Cd 2' 
_chem_comp.formula_weight    112.411 
_chem_comp.id                CD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CADMIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6H5O 
_atom_sites.fract_transf_matrix[1][1]    0.01239 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009523 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005387 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 JPP A 1 701 800 JPP PA4 . 
D 3 CD A 1 702 1 CD CD . 
E 3 CD A 1 703 2 CD CD . 
F 3 CD A 1 704 5 CD CD . 
G 3 CD A 1 705 6 CD CD . 
H 3 CD A 1 706 8 CD CD . 
I 3 CD A 1 707 9 CD CD . 
J 3 CD A 1 708 7 CD CD . 
K 3 CD A 1 709 10 CD CD . 
L 2 JPP B 1 701 800 JPP PA4 . 
M 3 CD B 1 702 11 CD CD . 
N 4 HOH A 1 801 43 HOH HOH . 
N 4 HOH A 2 802 7 HOH HOH . 
N 4 HOH A 3 803 136 HOH HOH . 
N 4 HOH A 4 804 67 HOH HOH . 
N 4 HOH A 5 805 17 HOH HOH . 
N 4 HOH A 6 806 119 HOH HOH . 
N 4 HOH A 7 807 108 HOH HOH . 
N 4 HOH A 8 808 103 HOH HOH . 
N 4 HOH A 9 809 148 HOH HOH . 
N 4 HOH A 10 810 94 HOH HOH . 
N 4 HOH A 11 811 68 HOH HOH . 
N 4 HOH A 12 812 72 HOH HOH . 
N 4 HOH A 13 813 144 HOH HOH . 
N 4 HOH A 14 814 115 HOH HOH . 
N 4 HOH A 15 815 66 HOH HOH . 
N 4 HOH A 16 816 16 HOH HOH . 
N 4 HOH A 17 817 14 HOH HOH . 
N 4 HOH A 18 818 106 HOH HOH . 
N 4 HOH A 19 819 21 HOH HOH . 
N 4 HOH A 20 820 18 HOH HOH . 
N 4 HOH A 21 821 91 HOH HOH . 
N 4 HOH A 22 822 15 HOH HOH . 
N 4 HOH A 23 823 9 HOH HOH . 
N 4 HOH A 24 824 37 HOH HOH . 
N 4 HOH A 25 825 137 HOH HOH . 
N 4 HOH A 26 826 110 HOH HOH . 
N 4 HOH A 27 827 30 HOH HOH . 
N 4 HOH A 28 828 114 HOH HOH . 
N 4 HOH A 29 829 90 HOH HOH . 
N 4 HOH A 30 830 4 HOH HOH . 
N 4 HOH A 31 831 10 HOH HOH . 
N 4 HOH A 32 832 12 HOH HOH . 
N 4 HOH A 33 833 112 HOH HOH . 
N 4 HOH A 34 834 20 HOH HOH . 
N 4 HOH A 35 835 107 HOH HOH . 
N 4 HOH A 36 836 29 HOH HOH . 
N 4 HOH A 37 837 13 HOH HOH . 
N 4 HOH A 38 838 133 HOH HOH . 
N 4 HOH A 39 839 70 HOH HOH . 
N 4 HOH A 40 840 48 HOH HOH . 
N 4 HOH A 41 841 74 HOH HOH . 
N 4 HOH A 42 842 44 HOH HOH . 
N 4 HOH A 43 843 22 HOH HOH . 
N 4 HOH A 44 844 135 HOH HOH . 
N 4 HOH A 45 845 71 HOH HOH . 
N 4 HOH A 46 846 26 HOH HOH . 
N 4 HOH A 47 847 27 HOH HOH . 
N 4 HOH A 48 848 113 HOH HOH . 
N 4 HOH A 49 849 42 HOH HOH . 
N 4 HOH A 50 850 36 HOH HOH . 
N 4 HOH A 51 851 73 HOH HOH . 
N 4 HOH A 52 852 23 HOH HOH . 
N 4 HOH A 53 853 79 HOH HOH . 
N 4 HOH A 54 854 69 HOH HOH . 
N 4 HOH A 55 855 25 HOH HOH . 
N 4 HOH A 56 856 92 HOH HOH . 
N 4 HOH A 57 857 64 HOH HOH . 
O 4 HOH B 1 801 53 HOH HOH . 
O 4 HOH B 2 802 130 HOH HOH . 
O 4 HOH B 3 803 81 HOH HOH . 
O 4 HOH B 4 804 117 HOH HOH . 
O 4 HOH B 5 805 143 HOH HOH . 
O 4 HOH B 6 806 97 HOH HOH . 
O 4 HOH B 7 807 100 HOH HOH . 
O 4 HOH B 8 808 95 HOH HOH . 
O 4 HOH B 9 809 138 HOH HOH . 
O 4 HOH B 10 810 76 HOH HOH . 
O 4 HOH B 11 811 123 HOH HOH . 
O 4 HOH B 12 812 104 HOH HOH . 
O 4 HOH B 13 813 109 HOH HOH . 
O 4 HOH B 14 814 145 HOH HOH . 
O 4 HOH B 15 815 116 HOH HOH . 
O 4 HOH B 16 816 51 HOH HOH . 
O 4 HOH B 17 817 124 HOH HOH . 
O 4 HOH B 18 818 142 HOH HOH . 
O 4 HOH B 19 819 32 HOH HOH . 
O 4 HOH B 20 820 28 HOH HOH . 
O 4 HOH B 21 821 141 HOH HOH . 
O 4 HOH B 22 822 147 HOH HOH . 
O 4 HOH B 23 823 87 HOH HOH . 
O 4 HOH B 24 824 102 HOH HOH . 
O 4 HOH B 25 825 122 HOH HOH . 
O 4 HOH B 26 826 82 HOH HOH . 
O 4 HOH B 27 827 31 HOH HOH . 
O 4 HOH B 28 828 47 HOH HOH . 
O 4 HOH B 29 829 99 HOH HOH . 
O 4 HOH B 30 830 77 HOH HOH . 
O 4 HOH B 31 831 96 HOH HOH . 
O 4 HOH B 32 832 98 HOH HOH . 
O 4 HOH B 33 833 125 HOH HOH . 
O 4 HOH B 34 834 140 HOH HOH . 
O 4 HOH B 35 835 6 HOH HOH . 
O 4 HOH B 36 836 128 HOH HOH . 
O 4 HOH B 37 837 84 HOH HOH . 
O 4 HOH B 38 838 126 HOH HOH . 
O 4 HOH B 39 839 139 HOH HOH . 
O 4 HOH B 40 840 35 HOH HOH . 
O 4 HOH B 41 841 54 HOH HOH . 
O 4 HOH B 42 842 33 HOH HOH . 
O 4 HOH B 43 843 85 HOH HOH . 
O 4 HOH B 44 844 62 HOH HOH . 
O 4 HOH B 45 845 134 HOH HOH . 
O 4 HOH B 46 846 146 HOH HOH . 
O 4 HOH B 47 847 149 HOH HOH . 
O 4 HOH B 48 848 121 HOH HOH . 
O 4 HOH B 49 849 120 HOH HOH . 
O 4 HOH B 50 850 24 HOH HOH . 
O 4 HOH B 51 851 118 HOH HOH . 
O 4 HOH B 52 852 78 HOH HOH . 
O 4 HOH B 53 853 132 HOH HOH . 
O 4 HOH B 54 854 89 HOH HOH . 
O 4 HOH B 55 855 60 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CD 
_atom_site.label_atom_id         CD 
_atom_site.label_comp_id         CD 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -30.394 
_atom_site.Cartn_y               -10.574 
_atom_site.Cartn_z               75.537 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        102.58 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CD 
_atom_site.auth_comp_id          CD 
_atom_site.auth_seq_id           702 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    29 
_model_server_stats.query_time_ms           280 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#