data_6H6J # _model_server_result.job_id MFzfAZorzecLFqM9sdplqA _model_server_result.datetime_utc '2024-11-22 09:16:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6h6j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":204}' # _entry.id 6H6J # _exptl.entry_id 6H6J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6H6J _cell.length_a 74.859 _cell.length_b 74.859 _cell.length_c 77.229 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6H6J _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 D O4 SO4 . A SO4 203 1_555 K S SO4 . A SO4 210 3_664 ? ? ? ? ? ? ? ? ? ? ? ? 1.539 ? metalc ? metalc1 A NE2 HIS 64 A HIS 63 1_555 B FE HEM . A HEM 201 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.475 ? metalc ? metalc2 A NE2 HIS 96 A HIS 95 1_555 B FE HEM . A HEM 201 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.985 ? metalc ? metalc3 A NE2 HIS 96 A HIS 95 1_555 B FE HEM . A HEM 201 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.003 ? metalc ? metalc4 B FE HEM . A HEM 201 1_555 C O CMO . A CMO 202 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.627 ? # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 450 n n C C2 TRS sing 451 n n C C3 TRS sing 452 n n C N TRS sing 453 n n C1 O1 TRS sing 454 n n C1 H11 TRS sing 455 n n C1 H12 TRS sing 456 n n C2 O2 TRS sing 457 n n C2 H21 TRS sing 458 n n C2 H22 TRS sing 459 n n C3 O3 TRS sing 460 n n C3 H31 TRS sing 461 n n C3 H32 TRS sing 462 n n N HN1 TRS sing 463 n n N HN2 TRS sing 464 n n N HN3 TRS sing 465 n n O1 HO1 TRS sing 466 n n O2 HO2 TRS sing 467 n n O3 HO3 TRS sing 468 n n # _atom_sites.entry_id 6H6J _atom_sites.fract_transf_matrix[1][1] 0.013358 _atom_sites.fract_transf_matrix[1][2] 0.007713 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015425 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012949 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 201 200 HEM HEM . C 3 CMO A 1 202 201 CMO CMO . D 4 SO4 A 1 203 1 SO4 SO4 . E 5 TRS A 1 204 2 TRS TRS . F 6 GOL A 1 205 3 GOL GOL . G 6 GOL A 1 206 4 GOL GOL . H 7 PEG A 1 207 5 PEG PEG . I 7 PEG A 1 208 6 PEG PEG . J 7 PEG A 1 209 7 PEG PEG . K 4 SO4 A 1 210 8 SO4 SO4 . L 8 HOH A 1 301 59 HOH HOH . L 8 HOH A 2 302 73 HOH HOH . L 8 HOH A 3 303 29 HOH HOH . L 8 HOH A 4 304 44 HOH HOH . L 8 HOH A 5 305 47 HOH HOH . L 8 HOH A 6 306 8 HOH HOH . L 8 HOH A 7 307 1 HOH HOH . L 8 HOH A 8 308 41 HOH HOH . L 8 HOH A 9 309 53 HOH HOH . L 8 HOH A 10 310 7 HOH HOH . L 8 HOH A 11 311 72 HOH HOH . L 8 HOH A 12 312 27 HOH HOH . L 8 HOH A 13 313 48 HOH HOH . L 8 HOH A 14 314 43 HOH HOH . L 8 HOH A 15 315 11 HOH HOH . L 8 HOH A 16 316 58 HOH HOH . L 8 HOH A 17 317 23 HOH HOH . L 8 HOH A 18 318 6 HOH HOH . L 8 HOH A 19 319 3 HOH HOH . L 8 HOH A 20 320 22 HOH HOH . L 8 HOH A 21 321 5 HOH HOH . L 8 HOH A 22 322 32 HOH HOH . L 8 HOH A 23 323 52 HOH HOH . L 8 HOH A 24 324 20 HOH HOH . L 8 HOH A 25 325 17 HOH HOH . L 8 HOH A 26 326 10 HOH HOH . L 8 HOH A 27 327 25 HOH HOH . L 8 HOH A 28 328 19 HOH HOH . L 8 HOH A 29 329 57 HOH HOH . L 8 HOH A 30 330 51 HOH HOH . L 8 HOH A 31 331 33 HOH HOH . L 8 HOH A 32 332 70 HOH HOH . L 8 HOH A 33 333 62 HOH HOH . L 8 HOH A 34 334 28 HOH HOH . L 8 HOH A 35 335 65 HOH HOH . L 8 HOH A 36 336 30 HOH HOH . L 8 HOH A 37 337 66 HOH HOH . L 8 HOH A 38 338 61 HOH HOH . L 8 HOH A 39 339 71 HOH HOH . L 8 HOH A 40 340 24 HOH HOH . L 8 HOH A 41 341 35 HOH HOH . L 8 HOH A 42 342 67 HOH HOH . L 8 HOH A 43 343 34 HOH HOH . L 8 HOH A 44 344 69 HOH HOH . L 8 HOH A 45 345 14 HOH HOH . L 8 HOH A 46 346 55 HOH HOH . L 8 HOH A 47 347 4 HOH HOH . L 8 HOH A 48 348 36 HOH HOH . L 8 HOH A 49 349 42 HOH HOH . L 8 HOH A 50 350 64 HOH HOH . L 8 HOH A 51 351 46 HOH HOH . L 8 HOH A 52 352 60 HOH HOH . L 8 HOH A 53 353 38 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . E 5 29.39 14.028 -3.882 1 87.59 ? C TRS 204 A 1 HETATM 2 C C1 TRS . . . E 5 29.166 12.496 -3.938 1 82.78 ? C1 TRS 204 A 1 HETATM 3 C C2 TRS . . . E 5 30.802 14.622 -4.151 1 87.99 ? C2 TRS 204 A 1 HETATM 4 C C3 TRS . . . E 5 28.239 14.951 -3.41 1 87.33 ? C3 TRS 204 A 1 HETATM 5 N N TRS . . . E 5 29.816 13.86 -2.443 1 96.33 ? N TRS 204 A 1 HETATM 6 O O1 TRS . . . E 5 27.87 12.204 -4.471 1 85.23 ? O1 TRS 204 A 1 HETATM 7 O O2 TRS . . . E 5 31.871 13.69 -3.849 1 84.62 ? O2 TRS 204 A 1 HETATM 8 O O3 TRS . . . E 5 28.723 16.236 -3.001 1 84.04 ? O3 TRS 204 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 8 #