data_6H6J # _model_server_result.job_id -EB4_v6otQuaYMEVOxW0-Q _model_server_result.datetime_utc '2024-11-22 09:34:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6h6j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":206}' # _entry.id 6H6J # _exptl.entry_id 6H6J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6H6J _cell.length_a 74.859 _cell.length_b 74.859 _cell.length_c 77.229 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6H6J _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 F N N ? 6 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 D O4 SO4 . A SO4 203 1_555 K S SO4 . A SO4 210 3_664 ? ? ? ? ? ? ? ? ? ? ? ? 1.539 ? metalc ? metalc1 A NE2 HIS 64 A HIS 63 1_555 B FE HEM . A HEM 201 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.475 ? metalc ? metalc2 A NE2 HIS 96 A HIS 95 1_555 B FE HEM . A HEM 201 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.985 ? metalc ? metalc3 A NE2 HIS 96 A HIS 95 1_555 B FE HEM . A HEM 201 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.003 ? metalc ? metalc4 B FE HEM . A HEM 201 1_555 C O CMO . A CMO 202 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.627 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 130 n n C1 C2 GOL sing 131 n n C1 H11 GOL sing 132 n n C1 H12 GOL sing 133 n n O1 HO1 GOL sing 134 n n C2 O2 GOL sing 135 n n C2 C3 GOL sing 136 n n C2 H2 GOL sing 137 n n O2 HO2 GOL sing 138 n n C3 O3 GOL sing 139 n n C3 H31 GOL sing 140 n n C3 H32 GOL sing 141 n n O3 HO3 GOL sing 142 n n # _atom_sites.entry_id 6H6J _atom_sites.fract_transf_matrix[1][1] 0.013358 _atom_sites.fract_transf_matrix[1][2] 0.007713 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015425 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012949 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 201 200 HEM HEM . C 3 CMO A 1 202 201 CMO CMO . D 4 SO4 A 1 203 1 SO4 SO4 . E 5 TRS A 1 204 2 TRS TRS . F 6 GOL A 1 205 3 GOL GOL . G 6 GOL A 1 206 4 GOL GOL . H 7 PEG A 1 207 5 PEG PEG . I 7 PEG A 1 208 6 PEG PEG . J 7 PEG A 1 209 7 PEG PEG . K 4 SO4 A 1 210 8 SO4 SO4 . L 8 HOH A 1 301 59 HOH HOH . L 8 HOH A 2 302 73 HOH HOH . L 8 HOH A 3 303 29 HOH HOH . L 8 HOH A 4 304 44 HOH HOH . L 8 HOH A 5 305 47 HOH HOH . L 8 HOH A 6 306 8 HOH HOH . L 8 HOH A 7 307 1 HOH HOH . L 8 HOH A 8 308 41 HOH HOH . L 8 HOH A 9 309 53 HOH HOH . L 8 HOH A 10 310 7 HOH HOH . L 8 HOH A 11 311 72 HOH HOH . L 8 HOH A 12 312 27 HOH HOH . L 8 HOH A 13 313 48 HOH HOH . L 8 HOH A 14 314 43 HOH HOH . L 8 HOH A 15 315 11 HOH HOH . L 8 HOH A 16 316 58 HOH HOH . L 8 HOH A 17 317 23 HOH HOH . L 8 HOH A 18 318 6 HOH HOH . L 8 HOH A 19 319 3 HOH HOH . L 8 HOH A 20 320 22 HOH HOH . L 8 HOH A 21 321 5 HOH HOH . L 8 HOH A 22 322 32 HOH HOH . L 8 HOH A 23 323 52 HOH HOH . L 8 HOH A 24 324 20 HOH HOH . L 8 HOH A 25 325 17 HOH HOH . L 8 HOH A 26 326 10 HOH HOH . L 8 HOH A 27 327 25 HOH HOH . L 8 HOH A 28 328 19 HOH HOH . L 8 HOH A 29 329 57 HOH HOH . L 8 HOH A 30 330 51 HOH HOH . L 8 HOH A 31 331 33 HOH HOH . L 8 HOH A 32 332 70 HOH HOH . L 8 HOH A 33 333 62 HOH HOH . L 8 HOH A 34 334 28 HOH HOH . L 8 HOH A 35 335 65 HOH HOH . L 8 HOH A 36 336 30 HOH HOH . L 8 HOH A 37 337 66 HOH HOH . L 8 HOH A 38 338 61 HOH HOH . L 8 HOH A 39 339 71 HOH HOH . L 8 HOH A 40 340 24 HOH HOH . L 8 HOH A 41 341 35 HOH HOH . L 8 HOH A 42 342 67 HOH HOH . L 8 HOH A 43 343 34 HOH HOH . L 8 HOH A 44 344 69 HOH HOH . L 8 HOH A 45 345 14 HOH HOH . L 8 HOH A 46 346 55 HOH HOH . L 8 HOH A 47 347 4 HOH HOH . L 8 HOH A 48 348 36 HOH HOH . L 8 HOH A 49 349 42 HOH HOH . L 8 HOH A 50 350 64 HOH HOH . L 8 HOH A 51 351 46 HOH HOH . L 8 HOH A 52 352 60 HOH HOH . L 8 HOH A 53 353 38 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . G 6 40.801 3.737 -14.985 1 68.47 ? C1 GOL 206 A 1 HETATM 2 O O1 GOL . . . G 6 39.83 3.524 -13.95 1 72.87 ? O1 GOL 206 A 1 HETATM 3 C C2 GOL . . . G 6 42.141 3.367 -14.421 1 66.17 ? C2 GOL 206 A 1 HETATM 4 O O2 GOL . . . G 6 42.698 4.586 -13.927 1 71.73 ? O2 GOL 206 A 1 HETATM 5 C C3 GOL . . . G 6 41.886 2.291 -13.361 1 59.88 ? C3 GOL 206 A 1 HETATM 6 O O3 GOL . . . G 6 40.666 1.578 -13.669 1 53.9 ? O3 GOL 206 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #