data_6H6N # _model_server_result.job_id NLO2dXOi9QmGI34CfFVyqw _model_server_result.datetime_utc '2024-10-19 09:23:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6h6n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 6H6N # _exptl.entry_id 6H6N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6H6N _cell.length_a 48.3 _cell.length_b 67.93 _cell.length_c 73.08 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6H6N _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 23 A GLU 23 1_555 G CA CA . A CA 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.576 ? metalc ? metalc2 A OE2 GLU 23 A GLU 23 1_555 G CA CA . A CA 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? metalc ? metalc3 A OE1 GLU 51 A GLU 51 1_555 C TB TB . A TB 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.418 ? metalc ? metalc4 A OE2 GLU 51 A GLU 51 1_555 C TB TB . A TB 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.373 ? metalc ? metalc5 A OD1 ASP 69 A ASP 69 1_555 G CA CA . A CA 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.607 ? metalc ? metalc6 A OD1 ASP 77 A ASP 77 1_555 E CA CA . A CA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.454 ? metalc ? metalc7 A OD2 ASP 77 A ASP 77 1_555 E CA CA . A CA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.7 ? metalc ? metalc8 A O ALA 78 A ALA 78 1_555 E CA CA . A CA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.133 ? metalc ? metalc9 A OD1 ASP 79 A ASP 79 1_555 D CA CA . A CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? metalc ? metalc10 A OD2 ASP 79 A ASP 79 1_555 D CA CA . A CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.479 ? metalc ? metalc11 A OD1 ASP 124 A ASP 124 1_555 H CA CA . A CA 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.568 ? metalc ? metalc12 A O ALA 126 A ALA 126 1_555 F CA CA . A CA 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? metalc ? metalc13 A OE1 GLU 127 A GLU 127 1_555 H CA CA . A CA 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.568 ? metalc ? metalc14 A O ASP 129 A ASP 129 1_555 F CA CA . A CA 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc15 A O ALA 131 A ALA 131 1_555 F CA CA . A CA 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.498 ? metalc ? metalc16 C TB TB . A TB 201 1_555 K O HOH . A HOH 356 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.359 ? metalc ? metalc17 D CA CA . A CA 202 1_555 K O HOH . A HOH 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? metalc ? metalc18 D CA CA . A CA 202 1_555 K O HOH . A HOH 335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc19 D CA CA . A CA 202 3_645 B OE1 GLU 23 B GLU 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? metalc ? metalc20 D CA CA . A CA 202 3_645 B OE2 GLU 23 B GLU 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.522 ? metalc ? metalc21 D CA CA . A CA 202 3_645 B OD1 ASP 69 B ASP 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc22 E CA CA . A CA 203 1_555 K O HOH . A HOH 327 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc23 F CA CA . A CA 204 1_555 K O HOH . A HOH 311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc24 F CA CA . A CA 204 1_555 K O HOH . A HOH 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? metalc ? metalc25 G CA CA . A CA 205 1_555 K O HOH . A HOH 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc26 G CA CA . A CA 205 1_555 K O HOH . A HOH 333 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.173 ? metalc ? metalc27 G CA CA . A CA 205 1_555 L O HOH . B HOH 317 2_654 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc28 G CA CA . A CA 205 1_555 L O HOH . B HOH 345 3_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? metalc ? metalc29 B OE1 GLU 73 B GLU 73 1_555 I TB TB . B TB 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.449 ? metalc ? metalc30 B OE2 GLU 73 B GLU 73 1_555 I TB TB . B TB 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc31 B O ASP 124 B ASP 124 1_555 J CA CA . B CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? metalc ? metalc32 B OD1 ASP 124 B ASP 124 1_555 J CA CA . B CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? metalc ? metalc33 B O GLU 127 B GLU 127 1_555 J CA CA . B CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? metalc ? metalc34 B OD1 ASP 129 B ASP 129 1_555 J CA CA . B CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? metalc ? metalc35 I TB TB . B TB 201 1_555 L O HOH . B HOH 337 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.048 ? metalc ? metalc36 I TB TB . B TB 201 1_555 L O HOH . B HOH 340 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.659 ? metalc ? metalc37 J CA CA . B CA 202 1_555 L O HOH . B HOH 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.496 ? metalc ? metalc38 J CA CA . B CA 202 1_555 L O HOH . B HOH 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.151 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6H6N _atom_sites.fract_transf_matrix[1][1] 0.020704 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014721 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013684 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 TB A 1 201 3 TB TB . D 3 CA A 1 202 1 CA CA . E 3 CA A 1 203 2 CA CA . F 3 CA A 1 204 3 CA CA . G 3 CA A 1 205 5 CA CA . H 3 CA A 1 206 6 CA CA . I 2 TB B 1 201 2 TB TB . J 3 CA B 1 202 4 CA CA . K 4 HOH A 1 301 25 HOH HOH . K 4 HOH A 2 302 2 HOH HOH . K 4 HOH A 3 303 29 HOH HOH . K 4 HOH A 4 304 51 HOH HOH . K 4 HOH A 5 305 10 HOH HOH . K 4 HOH A 6 306 19 HOH HOH . K 4 HOH A 7 307 68 HOH HOH . K 4 HOH A 8 308 132 HOH HOH . K 4 HOH A 9 309 30 HOH HOH . K 4 HOH A 10 310 36 HOH HOH . K 4 HOH A 11 311 53 HOH HOH . K 4 HOH A 12 312 41 HOH HOH . K 4 HOH A 13 313 1 HOH HOH . K 4 HOH A 14 314 13 HOH HOH . K 4 HOH A 15 315 6 HOH HOH . K 4 HOH A 16 316 119 HOH HOH . K 4 HOH A 17 317 44 HOH HOH . K 4 HOH A 18 318 82 HOH HOH . K 4 HOH A 19 319 59 HOH HOH . K 4 HOH A 20 320 54 HOH HOH . K 4 HOH A 21 321 38 HOH HOH . K 4 HOH A 22 322 106 HOH HOH . K 4 HOH A 23 323 98 HOH HOH . K 4 HOH A 24 324 12 HOH HOH . K 4 HOH A 25 325 7 HOH HOH . K 4 HOH A 26 326 74 HOH HOH . K 4 HOH A 27 327 15 HOH HOH . K 4 HOH A 28 328 64 HOH HOH . K 4 HOH A 29 329 130 HOH HOH . K 4 HOH A 30 330 103 HOH HOH . K 4 HOH A 31 331 86 HOH HOH . K 4 HOH A 32 332 108 HOH HOH . K 4 HOH A 33 333 89 HOH HOH . K 4 HOH A 34 334 49 HOH HOH . K 4 HOH A 35 335 52 HOH HOH . K 4 HOH A 36 336 31 HOH HOH . K 4 HOH A 37 337 33 HOH HOH . K 4 HOH A 38 338 40 HOH HOH . K 4 HOH A 39 339 87 HOH HOH . K 4 HOH A 40 340 71 HOH HOH . K 4 HOH A 41 341 46 HOH HOH . K 4 HOH A 42 342 125 HOH HOH . K 4 HOH A 43 343 5 HOH HOH . K 4 HOH A 44 344 63 HOH HOH . K 4 HOH A 45 345 95 HOH HOH . K 4 HOH A 46 346 88 HOH HOH . K 4 HOH A 47 347 122 HOH HOH . K 4 HOH A 48 348 24 HOH HOH . K 4 HOH A 49 349 4 HOH HOH . K 4 HOH A 50 350 112 HOH HOH . K 4 HOH A 51 351 45 HOH HOH . K 4 HOH A 52 352 92 HOH HOH . K 4 HOH A 53 353 48 HOH HOH . K 4 HOH A 54 354 11 HOH HOH . K 4 HOH A 55 355 134 HOH HOH . K 4 HOH A 56 356 137 HOH HOH . K 4 HOH A 57 357 20 HOH HOH . K 4 HOH A 58 358 55 HOH HOH . K 4 HOH A 59 359 110 HOH HOH . K 4 HOH A 60 360 91 HOH HOH . K 4 HOH A 61 361 85 HOH HOH . K 4 HOH A 62 362 101 HOH HOH . K 4 HOH A 63 363 100 HOH HOH . K 4 HOH A 64 364 94 HOH HOH . K 4 HOH A 65 365 84 HOH HOH . L 4 HOH B 1 301 107 HOH HOH . L 4 HOH B 2 302 78 HOH HOH . L 4 HOH B 3 303 77 HOH HOH . L 4 HOH B 4 304 60 HOH HOH . L 4 HOH B 5 305 50 HOH HOH . L 4 HOH B 6 306 80 HOH HOH . L 4 HOH B 7 307 28 HOH HOH . L 4 HOH B 8 308 27 HOH HOH . L 4 HOH B 9 309 79 HOH HOH . L 4 HOH B 10 310 21 HOH HOH . L 4 HOH B 11 311 26 HOH HOH . L 4 HOH B 12 312 69 HOH HOH . L 4 HOH B 13 313 81 HOH HOH . L 4 HOH B 14 314 56 HOH HOH . L 4 HOH B 15 315 3 HOH HOH . L 4 HOH B 16 316 133 HOH HOH . L 4 HOH B 17 317 57 HOH HOH . L 4 HOH B 18 318 96 HOH HOH . L 4 HOH B 19 319 70 HOH HOH . L 4 HOH B 20 320 99 HOH HOH . L 4 HOH B 21 321 124 HOH HOH . L 4 HOH B 22 322 37 HOH HOH . L 4 HOH B 23 323 90 HOH HOH . L 4 HOH B 24 324 67 HOH HOH . L 4 HOH B 25 325 43 HOH HOH . L 4 HOH B 26 326 18 HOH HOH . L 4 HOH B 27 327 34 HOH HOH . L 4 HOH B 28 328 73 HOH HOH . L 4 HOH B 29 329 62 HOH HOH . L 4 HOH B 30 330 9 HOH HOH . L 4 HOH B 31 331 72 HOH HOH . L 4 HOH B 32 332 32 HOH HOH . L 4 HOH B 33 333 16 HOH HOH . L 4 HOH B 34 334 109 HOH HOH . L 4 HOH B 35 335 17 HOH HOH . L 4 HOH B 36 336 8 HOH HOH . L 4 HOH B 37 337 14 HOH HOH . L 4 HOH B 38 338 61 HOH HOH . L 4 HOH B 39 339 42 HOH HOH . L 4 HOH B 40 340 111 HOH HOH . L 4 HOH B 41 341 75 HOH HOH . L 4 HOH B 42 342 83 HOH HOH . L 4 HOH B 43 343 113 HOH HOH . L 4 HOH B 44 344 35 HOH HOH . L 4 HOH B 45 345 58 HOH HOH . L 4 HOH B 46 346 65 HOH HOH . L 4 HOH B 47 347 93 HOH HOH . L 4 HOH B 48 348 22 HOH HOH . L 4 HOH B 49 349 47 HOH HOH . L 4 HOH B 50 350 66 HOH HOH . L 4 HOH B 51 351 104 HOH HOH . L 4 HOH B 52 352 136 HOH HOH . L 4 HOH B 53 353 23 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 15.418 _atom_site.Cartn_y 18.129 _atom_site.Cartn_z 20.452 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 27.1 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 202 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #