data_6H6Z # _model_server_result.job_id JBLw01Si2zyXdBUdrHmCPw _model_server_result.datetime_utc '2025-08-30 15:39:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6h6z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":602}' # _entry.id 6H6Z # _exptl.entry_id 6H6Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.8 _cell.angle_gamma 90 _cell.entry_id 6H6Z _cell.length_a 172.24 _cell.length_b 89.64 _cell.length_c 61.92 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6H6Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 L N N ? 4 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 C SG CYS 22 C CYS 22 1_555 C SG CYS 96 C CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf2 D SG CYS 22 D CYS 22 1_555 D SG CYS 96 D CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? metalc ? metalc1 A O PHE 126 A PHE 352 1_555 E NA NA . A NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc2 A O ASN 168 A ASN 394 1_555 E NA NA . A NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.642 ? metalc ? metalc3 A O GLY 170 A GLY 396 1_555 E NA NA . A NA 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? metalc ? metalc4 E NA NA . A NA 601 1_555 N O HOH . A HOH 729 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? metalc ? metalc5 B O PHE 126 B PHE 352 1_555 K NA NA . B NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? metalc ? metalc6 B O ASN 168 B ASN 394 1_555 K NA NA . B NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.523 ? metalc ? metalc7 B O GLY 170 B GLY 396 1_555 K NA NA . B NA 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? metalc ? metalc8 K NA NA . B NA 602 1_555 O O HOH . B HOH 712 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 6H6Z _atom_sites.fract_transf_matrix[1][1] 0.005806 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001864 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011156 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016962 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 NA A 1 601 600 NA NA . F 4 EDO A 1 602 601 EDO EDO . G 4 EDO A 1 603 603 EDO EDO . H 4 EDO A 1 604 604 EDO EDO . I 4 EDO A 1 605 601 EDO EDO . J 4 EDO B 1 601 602 EDO EDO . K 3 NA B 1 602 600 NA NA . L 4 EDO B 1 603 602 EDO EDO . M 4 EDO B 1 604 603 EDO EDO . N 5 HOH A 1 701 705 HOH HOH . N 5 HOH A 2 702 758 HOH HOH . N 5 HOH A 3 703 726 HOH HOH . N 5 HOH A 4 704 771 HOH HOH . N 5 HOH A 5 705 702 HOH HOH . N 5 HOH A 6 706 700 HOH HOH . N 5 HOH A 7 707 798 HOH HOH . N 5 HOH A 8 708 745 HOH HOH . N 5 HOH A 9 709 793 HOH HOH . N 5 HOH A 10 710 779 HOH HOH . N 5 HOH A 11 711 735 HOH HOH . N 5 HOH A 12 712 767 HOH HOH . N 5 HOH A 13 713 788 HOH HOH . N 5 HOH A 14 714 722 HOH HOH . N 5 HOH A 15 715 706 HOH HOH . N 5 HOH A 16 716 711 HOH HOH . N 5 HOH A 17 717 746 HOH HOH . N 5 HOH A 18 718 707 HOH HOH . N 5 HOH A 19 719 736 HOH HOH . N 5 HOH A 20 720 721 HOH HOH . N 5 HOH A 21 721 790 HOH HOH . N 5 HOH A 22 722 730 HOH HOH . N 5 HOH A 23 723 795 HOH HOH . N 5 HOH A 24 724 712 HOH HOH . N 5 HOH A 25 725 761 HOH HOH . N 5 HOH A 26 726 724 HOH HOH . N 5 HOH A 27 727 717 HOH HOH . N 5 HOH A 28 728 710 HOH HOH . N 5 HOH A 29 729 797 HOH HOH . N 5 HOH A 30 730 753 HOH HOH . N 5 HOH A 31 731 732 HOH HOH . N 5 HOH A 32 732 791 HOH HOH . N 5 HOH A 33 733 703 HOH HOH . N 5 HOH A 34 734 719 HOH HOH . N 5 HOH A 35 735 763 HOH HOH . N 5 HOH A 36 736 744 HOH HOH . N 5 HOH A 37 737 774 HOH HOH . N 5 HOH A 38 738 746 HOH HOH . N 5 HOH A 39 739 716 HOH HOH . N 5 HOH A 40 740 754 HOH HOH . N 5 HOH A 41 741 777 HOH HOH . N 5 HOH A 42 742 718 HOH HOH . N 5 HOH A 43 743 738 HOH HOH . N 5 HOH A 44 744 769 HOH HOH . N 5 HOH A 45 745 770 HOH HOH . N 5 HOH A 46 746 796 HOH HOH . N 5 HOH A 47 747 742 HOH HOH . N 5 HOH A 48 748 714 HOH HOH . N 5 HOH A 49 749 794 HOH HOH . N 5 HOH A 50 750 766 HOH HOH . N 5 HOH A 51 751 748 HOH HOH . N 5 HOH A 52 752 704 HOH HOH . N 5 HOH A 53 753 775 HOH HOH . N 5 HOH A 54 754 715 HOH HOH . N 5 HOH A 55 755 741 HOH HOH . N 5 HOH A 56 756 756 HOH HOH . N 5 HOH A 57 757 783 HOH HOH . N 5 HOH A 58 758 780 HOH HOH . N 5 HOH A 59 759 776 HOH HOH . N 5 HOH A 60 760 781 HOH HOH . N 5 HOH A 61 761 727 HOH HOH . N 5 HOH A 62 762 728 HOH HOH . N 5 HOH A 63 763 701 HOH HOH . N 5 HOH A 64 764 789 HOH HOH . N 5 HOH A 65 765 768 HOH HOH . N 5 HOH A 66 766 751 HOH HOH . N 5 HOH A 67 767 731 HOH HOH . N 5 HOH A 68 768 749 HOH HOH . N 5 HOH A 69 769 709 HOH HOH . N 5 HOH A 70 770 734 HOH HOH . N 5 HOH A 71 771 759 HOH HOH . N 5 HOH A 72 772 752 HOH HOH . N 5 HOH A 73 773 757 HOH HOH . N 5 HOH A 74 774 765 HOH HOH . N 5 HOH A 75 775 723 HOH HOH . N 5 HOH A 76 776 720 HOH HOH . N 5 HOH A 77 777 708 HOH HOH . N 5 HOH A 78 778 737 HOH HOH . N 5 HOH A 79 779 772 HOH HOH . N 5 HOH A 80 780 782 HOH HOH . N 5 HOH A 81 781 729 HOH HOH . N 5 HOH A 82 782 713 HOH HOH . N 5 HOH A 83 783 755 HOH HOH . N 5 HOH A 84 784 773 HOH HOH . N 5 HOH A 85 785 785 HOH HOH . N 5 HOH A 86 786 760 HOH HOH . N 5 HOH A 87 787 743 HOH HOH . N 5 HOH A 88 788 778 HOH HOH . N 5 HOH A 89 789 747 HOH HOH . N 5 HOH A 90 790 787 HOH HOH . N 5 HOH A 91 791 739 HOH HOH . N 5 HOH A 92 792 764 HOH HOH . N 5 HOH A 93 793 792 HOH HOH . N 5 HOH A 94 794 740 HOH HOH . N 5 HOH A 95 795 755 HOH HOH . N 5 HOH A 96 796 784 HOH HOH . N 5 HOH A 97 797 723 HOH HOH . N 5 HOH A 98 798 750 HOH HOH . N 5 HOH A 99 799 786 HOH HOH . O 5 HOH B 1 701 741 HOH HOH . O 5 HOH B 2 702 733 HOH HOH . O 5 HOH B 3 703 761 HOH HOH . O 5 HOH B 4 704 708 HOH HOH . O 5 HOH B 5 705 782 HOH HOH . O 5 HOH B 6 706 724 HOH HOH . O 5 HOH B 7 707 738 HOH HOH . O 5 HOH B 8 708 757 HOH HOH . O 5 HOH B 9 709 729 HOH HOH . O 5 HOH B 10 710 758 HOH HOH . O 5 HOH B 11 711 700 HOH HOH . O 5 HOH B 12 712 776 HOH HOH . O 5 HOH B 13 713 712 HOH HOH . O 5 HOH B 14 714 752 HOH HOH . O 5 HOH B 15 715 704 HOH HOH . O 5 HOH B 16 716 744 HOH HOH . O 5 HOH B 17 717 736 HOH HOH . O 5 HOH B 18 718 715 HOH HOH . O 5 HOH B 19 719 701 HOH HOH . O 5 HOH B 20 720 718 HOH HOH . O 5 HOH B 21 721 719 HOH HOH . O 5 HOH B 22 722 750 HOH HOH . O 5 HOH B 23 723 762 HOH HOH . O 5 HOH B 24 724 709 HOH HOH . O 5 HOH B 25 725 711 HOH HOH . O 5 HOH B 26 726 725 HOH HOH . O 5 HOH B 27 727 703 HOH HOH . O 5 HOH B 28 728 705 HOH HOH . O 5 HOH B 29 729 710 HOH HOH . O 5 HOH B 30 730 713 HOH HOH . O 5 HOH B 31 731 780 HOH HOH . O 5 HOH B 32 732 771 HOH HOH . O 5 HOH B 33 733 766 HOH HOH . O 5 HOH B 34 734 739 HOH HOH . O 5 HOH B 35 735 730 HOH HOH . O 5 HOH B 36 736 774 HOH HOH . O 5 HOH B 37 737 778 HOH HOH . O 5 HOH B 38 738 714 HOH HOH . O 5 HOH B 39 739 706 HOH HOH . O 5 HOH B 40 740 722 HOH HOH . O 5 HOH B 41 741 772 HOH HOH . O 5 HOH B 42 742 745 HOH HOH . O 5 HOH B 43 743 777 HOH HOH . O 5 HOH B 44 744 734 HOH HOH . O 5 HOH B 45 745 717 HOH HOH . O 5 HOH B 46 746 784 HOH HOH . O 5 HOH B 47 747 728 HOH HOH . O 5 HOH B 48 748 748 HOH HOH . O 5 HOH B 49 749 764 HOH HOH . O 5 HOH B 50 750 707 HOH HOH . O 5 HOH B 51 751 760 HOH HOH . O 5 HOH B 52 752 770 HOH HOH . O 5 HOH B 53 753 702 HOH HOH . O 5 HOH B 54 754 742 HOH HOH . O 5 HOH B 55 755 765 HOH HOH . O 5 HOH B 56 756 759 HOH HOH . O 5 HOH B 57 757 731 HOH HOH . O 5 HOH B 58 758 721 HOH HOH . O 5 HOH B 59 759 754 HOH HOH . O 5 HOH B 60 760 720 HOH HOH . O 5 HOH B 61 761 781 HOH HOH . O 5 HOH B 62 762 763 HOH HOH . O 5 HOH B 63 763 735 HOH HOH . O 5 HOH B 64 764 743 HOH HOH . O 5 HOH B 65 765 732 HOH HOH . O 5 HOH B 66 766 756 HOH HOH . O 5 HOH B 67 767 787 HOH HOH . O 5 HOH B 68 768 740 HOH HOH . O 5 HOH B 69 769 726 HOH HOH . O 5 HOH B 70 770 753 HOH HOH . O 5 HOH B 71 771 783 HOH HOH . O 5 HOH B 72 772 737 HOH HOH . O 5 HOH B 73 773 786 HOH HOH . O 5 HOH B 74 774 751 HOH HOH . O 5 HOH B 75 775 727 HOH HOH . O 5 HOH B 76 776 747 HOH HOH . O 5 HOH B 77 777 749 HOH HOH . O 5 HOH B 78 778 762 HOH HOH . O 5 HOH B 79 779 767 HOH HOH . O 5 HOH B 80 780 779 HOH HOH . O 5 HOH B 81 781 773 HOH HOH . O 5 HOH B 82 782 775 HOH HOH . O 5 HOH B 83 783 768 HOH HOH . O 5 HOH B 84 784 716 HOH HOH . O 5 HOH B 85 785 785 HOH HOH . O 5 HOH B 86 786 733 HOH HOH . O 5 HOH B 87 787 769 HOH HOH . O 5 HOH B 88 788 725 HOH HOH . P 5 HOH C 1 201 213 HOH HOH . P 5 HOH C 2 202 207 HOH HOH . P 5 HOH C 3 203 208 HOH HOH . P 5 HOH C 4 204 201 HOH HOH . P 5 HOH C 5 205 203 HOH HOH . P 5 HOH C 6 206 205 HOH HOH . P 5 HOH C 7 207 209 HOH HOH . P 5 HOH C 8 208 200 HOH HOH . P 5 HOH C 9 209 214 HOH HOH . P 5 HOH C 10 210 206 HOH HOH . P 5 HOH C 11 211 202 HOH HOH . P 5 HOH C 12 212 211 HOH HOH . P 5 HOH C 13 213 204 HOH HOH . P 5 HOH C 14 214 210 HOH HOH . P 5 HOH C 15 215 212 HOH HOH . Q 5 HOH D 1 201 205 HOH HOH . Q 5 HOH D 2 202 204 HOH HOH . Q 5 HOH D 3 203 200 HOH HOH . Q 5 HOH D 4 204 202 HOH HOH . Q 5 HOH D 5 205 206 HOH HOH . Q 5 HOH D 6 206 216 HOH HOH . Q 5 HOH D 7 207 214 HOH HOH . Q 5 HOH D 8 208 201 HOH HOH . Q 5 HOH D 9 209 215 HOH HOH . Q 5 HOH D 10 210 203 HOH HOH . Q 5 HOH D 11 211 208 HOH HOH . Q 5 HOH D 12 212 209 HOH HOH . Q 5 HOH D 13 213 213 HOH HOH . Q 5 HOH D 14 214 207 HOH HOH . Q 5 HOH D 15 215 211 HOH HOH . Q 5 HOH D 16 216 212 HOH HOH . Q 5 HOH D 17 217 210 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . F 4 213.518 -11.637 36.571 1 43.6 ? C1 EDO 602 A 1 HETATM 2 O O1 EDO . . . F 4 214.333 -10.777 35.765 1 45.75 ? O1 EDO 602 A 1 HETATM 3 C C2 EDO . . . F 4 212.881 -10.843 37.715 1 40.87 ? C2 EDO 602 A 1 HETATM 4 O O2 EDO . . . F 4 212.4 -9.584 37.23 1 39.4 ? O2 EDO 602 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 339 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #