data_6H7D # _model_server_result.job_id UQ8tsPm0Y4Eje11sblQyIA _model_server_result.datetime_utc '2024-11-27 17:06:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6h7d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":602}' # _entry.id 6H7D # _exptl.entry_id 6H7D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 109.37 _cell.angle_gamma 90 _cell.entry_id 6H7D _cell.length_a 51.68 _cell.length_b 92.46 _cell.length_c 66.8 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6H7D _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 78 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 77 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 450 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 449 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.025 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 399 n n P O2 PO4 sing 400 n n P O3 PO4 sing 401 n n P O4 PO4 sing 402 n n # _atom_sites.entry_id 6H7D _atom_sites.fract_transf_matrix[1][1] 0.01935 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006803 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010815 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015868 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BGC A 1 600 600 BGC BGC . C 3 P33 A 1 601 601 P33 PEG . D 4 PO4 A 1 602 602 PO4 PO4 . E 5 OLC A 1 603 603 OLC OLC . F 5 OLC A 1 604 604 OLC OLC . G 5 OLC A 1 605 605 OLC OLC . H 5 OLC A 1 606 606 OLC OLC . I 5 OLC A 1 607 607 OLC OLC . J 6 HOH A 1 701 716 HOH HOH . J 6 HOH A 2 702 708 HOH HOH . J 6 HOH A 3 703 718 HOH HOH . J 6 HOH A 4 704 728 HOH HOH . J 6 HOH A 5 705 715 HOH HOH . J 6 HOH A 6 706 703 HOH HOH . J 6 HOH A 7 707 701 HOH HOH . J 6 HOH A 8 708 720 HOH HOH . J 6 HOH A 9 709 707 HOH HOH . J 6 HOH A 10 710 712 HOH HOH . J 6 HOH A 11 711 726 HOH HOH . J 6 HOH A 12 712 711 HOH HOH . J 6 HOH A 13 713 705 HOH HOH . J 6 HOH A 14 714 723 HOH HOH . J 6 HOH A 15 715 717 HOH HOH . J 6 HOH A 16 716 710 HOH HOH . J 6 HOH A 17 717 702 HOH HOH . J 6 HOH A 18 718 724 HOH HOH . J 6 HOH A 19 719 719 HOH HOH . J 6 HOH A 20 720 731 HOH HOH . J 6 HOH A 21 721 714 HOH HOH . J 6 HOH A 22 722 727 HOH HOH . J 6 HOH A 23 723 709 HOH HOH . J 6 HOH A 24 724 722 HOH HOH . J 6 HOH A 25 725 704 HOH HOH . J 6 HOH A 26 726 713 HOH HOH . J 6 HOH A 27 727 706 HOH HOH . J 6 HOH A 28 728 721 HOH HOH . J 6 HOH A 29 729 729 HOH HOH . J 6 HOH A 30 730 725 HOH HOH . J 6 HOH A 31 731 730 HOH HOH . J 6 HOH A 32 732 733 HOH HOH . J 6 HOH A 33 733 732 HOH HOH . J 6 HOH A 34 734 734 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . D 4 -25.123 -28.242 18.661 1 72.92 ? P PO4 602 A 1 HETATM 2 O O1 PO4 . . . D 4 -26.162 -28.048 17.581 1 49.17 ? O1 PO4 602 A 1 HETATM 3 O O2 PO4 . . . D 4 -23.921 -28.976 18.142 1 65.78 ? O2 PO4 602 A 1 HETATM 4 O O3 PO4 . . . D 4 -25.724 -29.033 19.818 1 74.6 ? O3 PO4 602 A 1 HETATM 5 O O4 PO4 . . . D 4 -24.635 -26.894 19.137 1 68.21 ? O4 PO4 602 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #