data_6H7L # _model_server_result.job_id c1J73i37dozsEytJ3OBuPw _model_server_result.datetime_utc '2024-11-23 01:01:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6h7l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":403}' # _entry.id 6H7L # _exptl.entry_id 6H7L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 379.489 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description HEGA-10 _entity.pdbx_number_of_molecules 9 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6H7L _cell.length_a 116.513 _cell.length_b 119.699 _cell.length_c 129.156 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6H7L _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? trimeric 3 author_defined_assembly 1 ? trimeric 3 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,G,H,I,J,K,L,M,N,T,U 1 1 D,E,F,O,P,Q,R,S,V,W 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 I N N ? 4 J N N ? 4 K N N ? 4 L N N ? 4 N N N ? 4 P N N ? 4 Q N N ? 4 R N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 76 A CYS 114 1_555 B SG CYS 161 A CYS 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? disulf ? disulf2 B SG CYS 154 A CYS 192 1_555 B SG CYS 160 A CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf3 C SG CYS 23 C CYS 22 1_555 C SG CYS 96 C CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf4 E SG CYS 76 B CYS 114 1_555 E SG CYS 161 B CYS 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf5 E SG CYS 154 B CYS 192 1_555 E SG CYS 160 B CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf6 F SG CYS 23 D CYS 22 1_555 F SG CYS 96 D CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? metalc ? metalc1 B O CYS 154 A CYS 192 1_555 H NA NA . A NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.605 ? metalc ? metalc2 B O ASP 157 A ASP 195 1_555 H NA NA . A NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.503 ? metalc ? metalc3 B O CYS 160 A CYS 198 1_555 H NA NA . A NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc4 E O CYS 154 B CYS 192 1_555 O NA NA . B NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.64 ? metalc ? metalc5 E O ASP 157 B ASP 195 1_555 O NA NA . B NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.496 ? metalc ? metalc6 E O CYS 160 B CYS 198 1_555 O NA NA . B NA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? # _chem_comp.formula 'C18 H37 N O7' _chem_comp.formula_weight 379.489 _chem_comp.id 2CV _chem_comp.mon_nstd_flag . _chem_comp.name HEGA-10 _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C9 C12 2CV sing 1 n n C9 C1 2CV sing 2 n n C12 C15 2CV sing 3 n n C15 C18 2CV sing 4 n n C18 C21 2CV sing 5 n n C21 C24 2CV sing 6 n n C24 C27 2CV sing 7 n n C27 C30 2CV sing 8 n n C30 N33 2CV sing 9 n n C30 O34 2CV doub 10 n n N33 C35 2CV sing 11 n n N33 C36 2CV sing 12 n n C35 C60 2CV sing 13 n n C36 C37 2CV sing 14 n n C37 C40 2CV sing 15 n n C37 O47 2CV sing 16 n n C40 C41 2CV sing 17 n n C40 O49 2CV sing 18 n n C41 C42 2CV sing 19 n n C41 O51 2CV sing 20 n n C42 C43 2CV sing 21 n n C42 O53 2CV sing 22 n n C43 O44 2CV sing 23 n n C60 O63 2CV sing 24 n n C1 C0 2CV sing 25 n n C9 H91C 2CV sing 26 n n C9 H92C 2CV sing 27 n n C12 H121 2CV sing 28 n n C12 H122 2CV sing 29 n n C1 H11C 2CV sing 30 n n C1 H12C 2CV sing 31 n n C15 H151 2CV sing 32 n n C15 H152 2CV sing 33 n n C18 H181 2CV sing 34 n n C18 H182 2CV sing 35 n n C21 H211 2CV sing 36 n n C21 H212 2CV sing 37 n n C24 H241 2CV sing 38 n n C24 H242 2CV sing 39 n n C27 H271 2CV sing 40 n n C27 H272 2CV sing 41 n n C35 H351 2CV sing 42 n n C35 H352 2CV sing 43 n n C36 H361 2CV sing 44 n n C36 H362 2CV sing 45 n n C60 H601 2CV sing 46 n n C60 H602 2CV sing 47 n n C37 H37 2CV sing 48 n n C40 H40 2CV sing 49 n n O47 H47 2CV sing 50 n n C41 H41 2CV sing 51 n n O49 H49 2CV sing 52 n n C42 H42 2CV sing 53 n n O51 H51 2CV sing 54 n n C43 H431 2CV sing 55 n n C43 H432 2CV sing 56 n n O53 H53 2CV sing 57 n n O44 H44 2CV sing 58 n n O63 H63 2CV sing 59 n n C0 H01C 2CV sing 60 n n C0 H02C 2CV sing 61 n n C0 H03C 2CV sing 62 n n # _atom_sites.entry_id 6H7L _atom_sites.fract_transf_matrix[1][1] 0.008583 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008354 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007743 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 2CV E 1 201 505 2CV 2CV . H 5 NA A 1 401 402 NA NA . I 4 2CV A 1 402 501 2CV 2CV . J 4 2CV A 1 403 502 2CV 2CV . K 4 2CV A 1 404 503 2CV 2CV . L 4 2CV A 1 405 504 2CV 2CV . M 6 Y00 A 1 406 601 Y00 Y00 . N 4 2CV A 1 407 502 2CV 2CV . O 5 NA B 1 401 402 NA NA . P 4 2CV B 1 402 501 2CV 2CV . Q 4 2CV B 1 403 503 2CV 2CV . R 4 2CV B 1 404 504 2CV 2CV . S 6 Y00 B 1 405 601 Y00 Y00 . T 7 HOH A 1 501 1 HOH HOH . T 7 HOH A 2 502 2 HOH HOH . T 7 HOH A 3 503 12 HOH HOH . T 7 HOH A 4 504 19 HOH HOH . T 7 HOH A 5 505 3 HOH HOH . T 7 HOH A 6 506 22 HOH HOH . U 7 HOH C 1 201 4 HOH HOH . U 7 HOH C 2 202 29 HOH HOH . U 7 HOH C 3 203 15 HOH HOH . U 7 HOH C 4 204 30 HOH HOH . U 7 HOH C 5 205 18 HOH HOH . V 7 HOH B 1 501 10 HOH HOH . W 7 HOH D 1 201 23 HOH HOH . W 7 HOH D 2 202 28 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C18 2CV . . . Q 4 -55.602 35.908 -58.324 1 49.17 ? C18 2CV 403 B 1 HETATM 2 C C21 2CV . . . Q 4 -55.245 37.39 -58.227 1 50.92 ? C21 2CV 403 B 1 HETATM 3 C C24 2CV . . . Q 4 -56.459 38.293 -58.445 1 53.95 ? C24 2CV 403 B 1 HETATM 4 C C27 2CV . . . Q 4 -57.261 38.458 -57.158 1 58.06 ? C27 2CV 403 B 1 HETATM 5 C C30 2CV . . . Q 4 -58.43 39.422 -57.315 1 61.86 ? C30 2CV 403 B 1 HETATM 6 N N33 2CV . . . Q 4 -59.664 39.013 -57.733 1 65.09 ? N33 2CV 403 B 1 HETATM 7 O O34 2CV . . . Q 4 -58.189 40.588 -57.023 1 62.33 ? O34 2CV 403 B 1 HETATM 8 C C35 2CV . . . Q 4 -59.977 37.624 -58.119 1 65.43 ? C35 2CV 403 B 1 HETATM 9 C C36 2CV . . . Q 4 -60.818 39.948 -57.883 1 64.27 ? C36 2CV 403 B 1 HETATM 10 C C37 2CV . . . Q 4 -61.48 40.34 -56.548 1 62.54 ? C37 2CV 403 B 1 HETATM 11 C C40 2CV . . . Q 4 -62.638 41.32 -56.7 1 60.05 ? C40 2CV 403 B 1 HETATM 12 O O47 2CV . . . Q 4 -60.548 41.03 -55.717 1 65.71 ? O47 2CV 403 B 1 HETATM 13 O O49 2CV . . . Q 4 -63.745 40.718 -57.362 1 59.36 ? O49 2CV 403 B 1 HETATM 14 C C60 2CV . . . Q 4 -60.633 36.917 -56.929 1 66.3 ? C60 2CV 403 B 1 HETATM 15 O O63 2CV . . . Q 4 -62.02 36.648 -57.194 1 62.09 ? O63 2CV 403 B 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 378 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 15 #