data_6H7O # _model_server_result.job_id dpID8JkEEpetwsoQzwNaoA _model_server_result.datetime_utc '2024-11-22 22:02:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6h7o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":401}' # _entry.id 6H7O # _exptl.entry_id 6H7O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 287.357 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-{[(2S)-3-(tert-butylamino)-2-hydroxypropyl]oxy}-3H-indole-2-carbonitrile _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6H7O _cell.length_a 116.573 _cell.length_b 119.963 _cell.length_c 130.096 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6H7O _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? trimeric 3 author_defined_assembly 1 ? trimeric 3 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,G,H,I,J,K,L,M,R,S 1 1 D,E,F,N,O,P,Q,T 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 76 A CYS 114 1_555 B SG CYS 161 A CYS 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf2 B SG CYS 154 A CYS 192 1_555 B SG CYS 160 A CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf3 C SG CYS 23 C CYS 22 1_555 C SG CYS 96 C CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf4 E SG CYS 76 B CYS 114 1_555 E SG CYS 161 B CYS 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf5 E SG CYS 154 B CYS 192 1_555 E SG CYS 160 B CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf6 F SG CYS 23 D CYS 22 1_555 F SG CYS 96 D CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc1 B O CYS 154 A CYS 192 1_555 H NA NA . A NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.538 ? metalc ? metalc2 B O ASP 157 A ASP 195 1_555 H NA NA . A NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? metalc ? metalc3 B O CYS 160 A CYS 198 1_555 H NA NA . A NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.44 ? metalc ? metalc4 E O CYS 154 B CYS 192 1_555 O NA NA . B NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.561 ? metalc ? metalc5 E O ASP 157 B ASP 195 1_555 O NA NA . B NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.484 ? metalc ? metalc6 E O CYS 160 B CYS 198 1_555 O NA NA . B NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? metalc ? metalc7 O NA NA . B NA 402 1_555 T O HOH . B HOH 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.559 ? # _chem_comp.formula 'C16 H21 N3 O2' _chem_comp.formula_weight 287.357 _chem_comp.id P32 _chem_comp.mon_nstd_flag . _chem_comp.name 4-{[(2S)-3-(tert-butylamino)-2-hydroxypropyl]oxy}-3H-indole-2-carbonitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C16 N3 P32 trip 299 n n C16 C1 P32 sing 300 n n N1 C1 P32 doub 301 n n N1 C8 P32 sing 302 n n C1 C2 P32 sing 303 n n C2 C3 P32 sing 304 n n C3 C4 P32 sing 305 n y C3 C8 P32 doub 306 n y C4 C5 P32 doub 307 n y C4 O1 P32 sing 308 n n C5 C6 P32 sing 309 n y C6 C7 P32 doub 310 n y C7 C8 P32 sing 311 n y O1 C9 P32 sing 312 n n C9 C10 P32 sing 313 n n C10 O2 P32 sing 314 n n C10 C11 P32 sing 315 n n C11 N2 P32 sing 316 n n N2 C12 P32 sing 317 n n C12 C13 P32 sing 318 n n C12 C14 P32 sing 319 n n C12 C15 P32 sing 320 n n C2 H2 P32 sing 321 n n C2 H1 P32 sing 322 n n C5 H5 P32 sing 323 n n C6 H6 P32 sing 324 n n C7 H7 P32 sing 325 n n C9 H9C1 P32 sing 326 n n C9 H9C2 P32 sing 327 n n C10 H10 P32 sing 328 n n O2 HA P32 sing 329 n n C11 H111 P32 sing 330 n n C11 H112 P32 sing 331 n n N2 HB P32 sing 332 n n C13 H131 P32 sing 333 n n C13 H132 P32 sing 334 n n C13 H133 P32 sing 335 n n C14 H141 P32 sing 336 n n C14 H142 P32 sing 337 n n C14 H143 P32 sing 338 n n C15 H151 P32 sing 339 n n C15 H152 P32 sing 340 n n C15 H153 P32 sing 341 n n # _atom_sites.entry_id 6H7O _atom_sites.fract_transf_matrix[1][1] 0.008578 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008336 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007687 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 P32 A 1 401 401 P32 P32 . H 5 NA A 1 402 402 NA NA . I 6 2CV A 1 403 501 2CV 2CV . J 6 2CV A 1 404 502 2CV 2CV . K 6 2CV A 1 405 503 2CV 2CV . L 6 2CV A 1 406 504 2CV 2CV . M 6 2CV A 1 407 503 2CV 2CV . N 4 P32 B 1 401 401 P32 P32 . O 5 NA B 1 402 402 NA NA . P 6 2CV B 1 403 501 2CV 2CV . Q 6 2CV B 1 404 502 2CV 2CV . R 7 HOH A 1 501 2 HOH HOH . R 7 HOH A 2 502 1 HOH HOH . S 7 HOH C 1 201 9 HOH HOH . S 7 HOH C 2 202 5 HOH HOH . T 7 HOH B 1 501 4 HOH HOH . T 7 HOH B 2 502 3 HOH HOH . T 7 HOH B 3 503 404 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2 P32 . . . G 4 -19.733 -32.246 11.169 1 45.27 ? O2 P32 401 A 1 HETATM 2 C C10 P32 . . . G 4 -18.799 -32.539 12.217 1 47.05 ? C10 P32 401 A 1 HETATM 3 N N3 P32 . . . G 4 -12.956 -33.547 18.1 1 40.43 ? N3 P32 401 A 1 HETATM 4 C C11 P32 . . . G 4 -17.462 -31.85 11.962 1 50.6 ? C11 P32 401 A 1 HETATM 5 N N2 P32 . . . G 4 -17.035 -32.025 10.589 1 53.65 ? N2 P32 401 A 1 HETATM 6 C C12 P32 . . . G 4 -15.748 -31.541 10.12 1 57.56 ? C12 P32 401 A 1 HETATM 7 C C15 P32 . . . G 4 -14.624 -31.917 11.096 1 58.05 ? C15 P32 401 A 1 HETATM 8 C C13 P32 . . . G 4 -15.758 -30.02 9.962 1 56.48 ? C13 P32 401 A 1 HETATM 9 C C9 P32 . . . G 4 -19.296 -32.074 13.583 1 45.1 ? C9 P32 401 A 1 HETATM 10 O O1 P32 . . . G 4 -18.348 -32.467 14.585 1 43.16 ? O1 P32 401 A 1 HETATM 11 C C4 P32 . . . G 4 -18.318 -31.995 15.872 1 41.74 ? C4 P32 401 A 1 HETATM 12 C C5 P32 . . . G 4 -19.378 -31.305 16.454 1 42.65 ? C5 P32 401 A 1 HETATM 13 C C6 P32 . . . G 4 -19.323 -30.848 17.777 1 42.26 ? C6 P32 401 A 1 HETATM 14 C C7 P32 . . . G 4 -18.21 -31.04 18.6 1 41.69 ? C7 P32 401 A 1 HETATM 15 C C8 P32 . . . G 4 -17.106 -31.716 18.122 1 41.2 ? C8 P32 401 A 1 HETATM 16 C C3 P32 . . . G 4 -17.126 -32.221 16.719 1 41.27 ? C3 P32 401 A 1 HETATM 17 N N1 P32 . . . G 4 -15.908 -32.042 18.669 1 42.09 ? N1 P32 401 A 1 HETATM 18 C C1 P32 . . . G 4 -15.28 -32.699 17.67 1 42.62 ? C1 P32 401 A 1 HETATM 19 C C2 P32 . . . G 4 -15.914 -32.9 16.317 1 41.97 ? C2 P32 401 A 1 HETATM 20 C C16 P32 . . . G 4 -14.036 -33.144 17.924 1 42.77 ? C16 P32 401 A 1 HETATM 21 C C14 P32 . . . G 4 -15.502 -32.201 8.757 1 60.81 ? C14 P32 401 A 1 # _model_server_stats.io_time_ms 51 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 21 #