data_6H7O # _model_server_result.job_id C4T5FzFqXtb-cBAiiacK_g _model_server_result.datetime_utc '2024-11-26 10:19:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6h7o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":407}' # _entry.id 6H7O # _exptl.entry_id 6H7O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 379.489 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description HEGA-10 _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6H7O _cell.length_a 116.573 _cell.length_b 119.963 _cell.length_c 130.096 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6H7O _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? trimeric 3 author_defined_assembly 1 ? trimeric 3 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,G,H,I,J,K,L,M,R,S 1 1 D,E,F,N,O,P,Q,T 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 I N N ? 6 J N N ? 6 K N N ? 6 L N N ? 6 M N N ? 6 P N N ? 6 Q N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 76 A CYS 114 1_555 B SG CYS 161 A CYS 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf2 B SG CYS 154 A CYS 192 1_555 B SG CYS 160 A CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf3 C SG CYS 23 C CYS 22 1_555 C SG CYS 96 C CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf4 E SG CYS 76 B CYS 114 1_555 E SG CYS 161 B CYS 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf5 E SG CYS 154 B CYS 192 1_555 E SG CYS 160 B CYS 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf6 F SG CYS 23 D CYS 22 1_555 F SG CYS 96 D CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc1 B O CYS 154 A CYS 192 1_555 H NA NA . A NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.538 ? metalc ? metalc2 B O ASP 157 A ASP 195 1_555 H NA NA . A NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? metalc ? metalc3 B O CYS 160 A CYS 198 1_555 H NA NA . A NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.44 ? metalc ? metalc4 E O CYS 154 B CYS 192 1_555 O NA NA . B NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.561 ? metalc ? metalc5 E O ASP 157 B ASP 195 1_555 O NA NA . B NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.484 ? metalc ? metalc6 E O CYS 160 B CYS 198 1_555 O NA NA . B NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? metalc ? metalc7 O NA NA . B NA 402 1_555 T O HOH . B HOH 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.559 ? # _chem_comp.formula 'C18 H37 N O7' _chem_comp.formula_weight 379.489 _chem_comp.id 2CV _chem_comp.mon_nstd_flag . _chem_comp.name HEGA-10 _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C9 C12 2CV sing 1 n n C9 C1 2CV sing 2 n n C12 C15 2CV sing 3 n n C15 C18 2CV sing 4 n n C18 C21 2CV sing 5 n n C21 C24 2CV sing 6 n n C24 C27 2CV sing 7 n n C27 C30 2CV sing 8 n n C30 N33 2CV sing 9 n n C30 O34 2CV doub 10 n n N33 C35 2CV sing 11 n n N33 C36 2CV sing 12 n n C35 C60 2CV sing 13 n n C36 C37 2CV sing 14 n n C37 C40 2CV sing 15 n n C37 O47 2CV sing 16 n n C40 C41 2CV sing 17 n n C40 O49 2CV sing 18 n n C41 C42 2CV sing 19 n n C41 O51 2CV sing 20 n n C42 C43 2CV sing 21 n n C42 O53 2CV sing 22 n n C43 O44 2CV sing 23 n n C60 O63 2CV sing 24 n n C1 C0 2CV sing 25 n n C9 H91C 2CV sing 26 n n C9 H92C 2CV sing 27 n n C12 H121 2CV sing 28 n n C12 H122 2CV sing 29 n n C1 H11C 2CV sing 30 n n C1 H12C 2CV sing 31 n n C15 H151 2CV sing 32 n n C15 H152 2CV sing 33 n n C18 H181 2CV sing 34 n n C18 H182 2CV sing 35 n n C21 H211 2CV sing 36 n n C21 H212 2CV sing 37 n n C24 H241 2CV sing 38 n n C24 H242 2CV sing 39 n n C27 H271 2CV sing 40 n n C27 H272 2CV sing 41 n n C35 H351 2CV sing 42 n n C35 H352 2CV sing 43 n n C36 H361 2CV sing 44 n n C36 H362 2CV sing 45 n n C60 H601 2CV sing 46 n n C60 H602 2CV sing 47 n n C37 H37 2CV sing 48 n n C40 H40 2CV sing 49 n n O47 H47 2CV sing 50 n n C41 H41 2CV sing 51 n n O49 H49 2CV sing 52 n n C42 H42 2CV sing 53 n n O51 H51 2CV sing 54 n n C43 H431 2CV sing 55 n n C43 H432 2CV sing 56 n n O53 H53 2CV sing 57 n n O44 H44 2CV sing 58 n n O63 H63 2CV sing 59 n n C0 H01C 2CV sing 60 n n C0 H02C 2CV sing 61 n n C0 H03C 2CV sing 62 n n # _atom_sites.entry_id 6H7O _atom_sites.fract_transf_matrix[1][1] 0.008578 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008336 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007687 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 P32 A 1 401 401 P32 P32 . H 5 NA A 1 402 402 NA NA . I 6 2CV A 1 403 501 2CV 2CV . J 6 2CV A 1 404 502 2CV 2CV . K 6 2CV A 1 405 503 2CV 2CV . L 6 2CV A 1 406 504 2CV 2CV . M 6 2CV A 1 407 503 2CV 2CV . N 4 P32 B 1 401 401 P32 P32 . O 5 NA B 1 402 402 NA NA . P 6 2CV B 1 403 501 2CV 2CV . Q 6 2CV B 1 404 502 2CV 2CV . R 7 HOH A 1 501 2 HOH HOH . R 7 HOH A 2 502 1 HOH HOH . S 7 HOH C 1 201 9 HOH HOH . S 7 HOH C 2 202 5 HOH HOH . T 7 HOH B 1 501 4 HOH HOH . T 7 HOH B 2 502 3 HOH HOH . T 7 HOH B 3 503 404 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C9 2CV . . . M 6 -19.68 -31.026 32.81 1 60.07 ? C9 2CV 407 A 1 HETATM 2 C C12 2CV . . . M 6 -18.481 -30.678 31.929 1 59.81 ? C12 2CV 407 A 1 HETATM 3 C C15 2CV . . . M 6 -17.162 -31.005 32.621 1 60.1 ? C15 2CV 407 A 1 HETATM 4 C C18 2CV . . . M 6 -16.991 -32.501 32.894 1 59.96 ? C18 2CV 407 A 1 HETATM 5 C C21 2CV . . . M 6 -16.673 -33.345 31.663 1 60.4 ? C21 2CV 407 A 1 HETATM 6 C C24 2CV . . . M 6 -15.493 -32.858 30.834 1 63.02 ? C24 2CV 407 A 1 HETATM 7 C C27 2CV . . . M 6 -14.26 -32.581 31.689 1 68.7 ? C27 2CV 407 A 1 HETATM 8 C C30 2CV . . . M 6 -12.987 -33.081 31.04 1 78.88 ? C30 2CV 407 A 1 HETATM 9 N N33 2CV . . . M 6 -12.765 -34.403 30.858 1 84.02 ? N33 2CV 407 A 1 HETATM 10 O O34 2CV . . . M 6 -12.173 -32.229 30.708 1 86.07 ? O34 2CV 407 A 1 HETATM 11 C C35 2CV . . . M 6 -13.491 -35.463 31.58 1 91.85 ? C35 2CV 407 A 1 HETATM 12 C C36 2CV . . . M 6 -11.772 -34.933 29.896 1 78.83 ? C36 2CV 407 A 1 HETATM 13 C C37 2CV . . . M 6 -10.384 -34.295 30.042 1 77.85 ? C37 2CV 407 A 1 HETATM 14 C C40 2CV . . . M 6 -9.267 -35.266 29.683 1 80.07 ? C40 2CV 407 A 1 HETATM 15 C C41 2CV . . . M 6 -7.897 -34.59 29.515 1 84.9 ? C41 2CV 407 A 1 HETATM 16 C C42 2CV . . . M 6 -6.738 -35.495 29.941 1 89.44 ? C42 2CV 407 A 1 HETATM 17 C C43 2CV . . . M 6 -5.392 -34.762 29.943 1 90.45 ? C43 2CV 407 A 1 HETATM 18 O O44 2CV . . . M 6 -4.321 -35.667 29.632 1 91.2 ? O44 2CV 407 A 1 HETATM 19 O O47 2CV . . . M 6 -10.143 -33.85 31.379 1 77.59 ? O47 2CV 407 A 1 HETATM 20 O O49 2CV . . . M 6 -9.629 -35.89 28.454 1 78.05 ? O49 2CV 407 A 1 HETATM 21 O O51 2CV . . . M 6 -7.82 -33.376 30.272 1 88.9 ? O51 2CV 407 A 1 HETATM 22 O O53 2CV . . . M 6 -6.671 -36.614 29.049 1 93.86 ? O53 2CV 407 A 1 HETATM 23 C C60 2CV . . . M 6 -14.475 -36.119 30.604 1 97.33 ? C60 2CV 407 A 1 HETATM 24 O O63 2CV . . . M 6 -14.283 -37.541 30.538 1 106.89 ? O63 2CV 407 A 1 HETATM 25 C C1 2CV . . . M 6 -20.868 -30.1 32.588 1 61.01 ? C1 2CV 407 A 1 HETATM 26 C C0 2CV . . . M 6 -22.156 -30.814 32.944 1 61.33 ? C0 2CV 407 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 447 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 26 #