data_6H80 # _model_server_result.job_id 47B1CeUAFdIOE_ldkGyX6Q _model_server_result.datetime_utc '2024-11-24 16:03:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6h80 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1001}' # _entry.id 6H80 # _exptl.entry_id 6H80 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 248.298 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(4-methoxy-3-thiophen-2-yl-phenyl)ethanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6H80 _cell.length_a 165.08 _cell.length_b 181.25 _cell.length_c 57.92 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6H80 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 181 A CYS 446 1_555 C ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? metalc ? metalc2 A SG CYS 184 A CYS 449 1_555 C ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.932 ? metalc ? metalc3 A SG CYS 463 A CYS 728 1_555 D ZN ZN . A ZN 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.907 ? metalc ? metalc4 A SG CYS 582 A CYS 847 1_555 D ZN ZN . A ZN 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? # _chem_comp.formula 'C13 H12 O3 S' _chem_comp.formula_weight 248.298 _chem_comp.id 5V5 _chem_comp.mon_nstd_flag . _chem_comp.name '2-(4-methoxy-3-thiophen-2-yl-phenyl)ethanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C11 C10 5V5 doub 1 n y C11 S 5V5 sing 2 n y C10 C9 5V5 sing 3 n y C9 C8 5V5 doub 4 n y S C8 5V5 sing 5 n y C8 C7 5V5 sing 6 n n C7 C12 5V5 doub 7 n y C7 C5 5V5 sing 8 n y O1 C5 5V5 sing 9 n n O1 C6 5V5 sing 10 n n C12 C2 5V5 sing 11 n y C5 C4 5V5 doub 12 n y C2 C1 5V5 sing 13 n n C2 C3 5V5 doub 14 n y C4 C3 5V5 sing 15 n y O C 5V5 doub 16 n n C1 C 5V5 sing 17 n n C O2 5V5 sing 18 n n C1 H1 5V5 sing 19 n n C1 H2 5V5 sing 20 n n C3 H3 5V5 sing 21 n n O2 H4 5V5 sing 22 n n C11 H5 5V5 sing 23 n n C12 H6 5V5 sing 24 n n C4 H7 5V5 sing 25 n n C6 H8 5V5 sing 26 n n C6 H9 5V5 sing 27 n n C6 H10 5V5 sing 28 n n C9 H11 5V5 sing 29 n n C10 H12 5V5 sing 30 n n # _atom_sites.entry_id 6H80 _atom_sites.fract_transf_matrix[1][1] 0.006058 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005517 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017265 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 5V5 A 1 1001 1 5V5 DeS . C 3 ZN A 1 1002 1 ZN ZN . D 3 ZN A 1 1003 2 ZN ZN . E 4 PEG A 1 1004 3 PEG LIG . F 4 PEG A 1 1005 5 PEG LIG . G 4 PEG A 1 1006 7 PEG LIG . H 4 PEG A 1 1007 1 PEG LIG . I 4 PEG A 1 1008 3 PEG LIG . J 5 HOH A 1 1101 91 HOH HOH . J 5 HOH A 2 1102 101 HOH HOH . J 5 HOH A 3 1103 119 HOH HOH . J 5 HOH A 4 1104 97 HOH HOH . J 5 HOH A 5 1105 140 HOH HOH . J 5 HOH A 6 1106 143 HOH HOH . J 5 HOH A 7 1107 22 HOH HOH . J 5 HOH A 8 1108 154 HOH HOH . J 5 HOH A 9 1109 72 HOH HOH . J 5 HOH A 10 1110 153 HOH HOH . J 5 HOH A 11 1111 142 HOH HOH . J 5 HOH A 12 1112 169 HOH HOH . J 5 HOH A 13 1113 75 HOH HOH . J 5 HOH A 14 1114 146 HOH HOH . J 5 HOH A 15 1115 49 HOH HOH . J 5 HOH A 16 1116 104 HOH HOH . J 5 HOH A 17 1117 83 HOH HOH . J 5 HOH A 18 1118 18 HOH HOH . J 5 HOH A 19 1119 5 HOH HOH . J 5 HOH A 20 1120 111 HOH HOH . J 5 HOH A 21 1121 94 HOH HOH . J 5 HOH A 22 1122 92 HOH HOH . J 5 HOH A 23 1123 86 HOH HOH . J 5 HOH A 24 1124 125 HOH HOH . J 5 HOH A 25 1125 162 HOH HOH . J 5 HOH A 26 1126 7 HOH HOH . J 5 HOH A 27 1127 21 HOH HOH . J 5 HOH A 28 1128 10 HOH HOH . J 5 HOH A 29 1129 33 HOH HOH . J 5 HOH A 30 1130 45 HOH HOH . J 5 HOH A 31 1131 17 HOH HOH . J 5 HOH A 32 1132 70 HOH HOH . J 5 HOH A 33 1133 71 HOH HOH . J 5 HOH A 34 1134 139 HOH HOH . J 5 HOH A 35 1135 95 HOH HOH . J 5 HOH A 36 1136 28 HOH HOH . J 5 HOH A 37 1137 112 HOH HOH . J 5 HOH A 38 1138 165 HOH HOH . J 5 HOH A 39 1139 84 HOH HOH . J 5 HOH A 40 1140 122 HOH HOH . J 5 HOH A 41 1141 148 HOH HOH . J 5 HOH A 42 1142 63 HOH HOH . J 5 HOH A 43 1143 107 HOH HOH . J 5 HOH A 44 1144 160 HOH HOH . J 5 HOH A 45 1145 46 HOH HOH . J 5 HOH A 46 1146 16 HOH HOH . J 5 HOH A 47 1147 82 HOH HOH . J 5 HOH A 48 1148 39 HOH HOH . J 5 HOH A 49 1149 44 HOH HOH . J 5 HOH A 50 1150 38 HOH HOH . J 5 HOH A 51 1151 6 HOH HOH . J 5 HOH A 52 1152 50 HOH HOH . J 5 HOH A 53 1153 47 HOH HOH . J 5 HOH A 54 1154 36 HOH HOH . J 5 HOH A 55 1155 37 HOH HOH . J 5 HOH A 56 1156 159 HOH HOH . J 5 HOH A 57 1157 127 HOH HOH . J 5 HOH A 58 1158 80 HOH HOH . J 5 HOH A 59 1159 51 HOH HOH . J 5 HOH A 60 1160 166 HOH HOH . J 5 HOH A 61 1161 106 HOH HOH . J 5 HOH A 62 1162 11 HOH HOH . J 5 HOH A 63 1163 12 HOH HOH . J 5 HOH A 64 1164 102 HOH HOH . J 5 HOH A 65 1165 40 HOH HOH . J 5 HOH A 66 1166 9 HOH HOH . J 5 HOH A 67 1167 69 HOH HOH . J 5 HOH A 68 1168 124 HOH HOH . J 5 HOH A 69 1169 96 HOH HOH . J 5 HOH A 70 1170 85 HOH HOH . J 5 HOH A 71 1171 30 HOH HOH . J 5 HOH A 72 1172 149 HOH HOH . J 5 HOH A 73 1173 78 HOH HOH . J 5 HOH A 74 1174 74 HOH HOH . J 5 HOH A 75 1175 93 HOH HOH . J 5 HOH A 76 1176 3 HOH HOH . J 5 HOH A 77 1177 8 HOH HOH . J 5 HOH A 78 1178 54 HOH HOH . J 5 HOH A 79 1179 24 HOH HOH . J 5 HOH A 80 1180 23 HOH HOH . J 5 HOH A 81 1181 53 HOH HOH . J 5 HOH A 82 1182 57 HOH HOH . J 5 HOH A 83 1183 15 HOH HOH . J 5 HOH A 84 1184 67 HOH HOH . J 5 HOH A 85 1185 31 HOH HOH . J 5 HOH A 86 1186 25 HOH HOH . J 5 HOH A 87 1187 73 HOH HOH . J 5 HOH A 88 1188 26 HOH HOH . J 5 HOH A 89 1189 98 HOH HOH . J 5 HOH A 90 1190 114 HOH HOH . J 5 HOH A 91 1191 157 HOH HOH . J 5 HOH A 92 1192 89 HOH HOH . J 5 HOH A 93 1193 58 HOH HOH . J 5 HOH A 94 1194 41 HOH HOH . J 5 HOH A 95 1195 2 HOH HOH . J 5 HOH A 96 1196 62 HOH HOH . J 5 HOH A 97 1197 77 HOH HOH . J 5 HOH A 98 1198 14 HOH HOH . J 5 HOH A 99 1199 88 HOH HOH . J 5 HOH A 100 1200 1 HOH HOH . J 5 HOH A 101 1201 35 HOH HOH . J 5 HOH A 102 1202 20 HOH HOH . J 5 HOH A 103 1203 48 HOH HOH . J 5 HOH A 104 1204 4 HOH HOH . J 5 HOH A 105 1205 90 HOH HOH . J 5 HOH A 106 1206 120 HOH HOH . J 5 HOH A 107 1207 29 HOH HOH . J 5 HOH A 108 1208 105 HOH HOH . J 5 HOH A 109 1209 164 HOH HOH . J 5 HOH A 110 1210 42 HOH HOH . J 5 HOH A 111 1211 52 HOH HOH . J 5 HOH A 112 1212 134 HOH HOH . J 5 HOH A 113 1213 27 HOH HOH . J 5 HOH A 114 1214 136 HOH HOH . J 5 HOH A 115 1215 103 HOH HOH . J 5 HOH A 116 1216 100 HOH HOH . J 5 HOH A 117 1217 76 HOH HOH . J 5 HOH A 118 1218 123 HOH HOH . J 5 HOH A 119 1219 81 HOH HOH . J 5 HOH A 120 1220 60 HOH HOH . J 5 HOH A 121 1221 132 HOH HOH . J 5 HOH A 122 1222 43 HOH HOH . J 5 HOH A 123 1223 19 HOH HOH . J 5 HOH A 124 1224 116 HOH HOH . J 5 HOH A 125 1225 79 HOH HOH . J 5 HOH A 126 1226 99 HOH HOH . J 5 HOH A 127 1227 66 HOH HOH . J 5 HOH A 128 1228 32 HOH HOH . J 5 HOH A 129 1229 155 HOH HOH . J 5 HOH A 130 1230 68 HOH HOH . J 5 HOH A 131 1231 61 HOH HOH . J 5 HOH A 132 1232 109 HOH HOH . J 5 HOH A 133 1233 64 HOH HOH . J 5 HOH A 134 1234 145 HOH HOH . J 5 HOH A 135 1235 117 HOH HOH . J 5 HOH A 136 1236 168 HOH HOH . J 5 HOH A 137 1237 135 HOH HOH . J 5 HOH A 138 1238 131 HOH HOH . J 5 HOH A 139 1239 121 HOH HOH . J 5 HOH A 140 1240 118 HOH HOH . J 5 HOH A 141 1241 161 HOH HOH . J 5 HOH A 142 1242 158 HOH HOH . J 5 HOH A 143 1243 55 HOH HOH . J 5 HOH A 144 1244 34 HOH HOH . J 5 HOH A 145 1245 167 HOH HOH . J 5 HOH A 146 1246 147 HOH HOH . J 5 HOH A 147 1247 56 HOH HOH . J 5 HOH A 148 1248 126 HOH HOH . J 5 HOH A 149 1249 156 HOH HOH . J 5 HOH A 150 1250 144 HOH HOH . J 5 HOH A 151 1251 108 HOH HOH . J 5 HOH A 152 1252 115 HOH HOH . J 5 HOH A 153 1253 87 HOH HOH . J 5 HOH A 154 1254 130 HOH HOH . J 5 HOH A 155 1255 150 HOH HOH . J 5 HOH A 156 1256 133 HOH HOH . J 5 HOH A 157 1257 110 HOH HOH . J 5 HOH A 158 1258 141 HOH HOH . J 5 HOH A 159 1259 129 HOH HOH . J 5 HOH A 160 1260 128 HOH HOH . J 5 HOH A 161 1261 151 HOH HOH . J 5 HOH A 162 1262 65 HOH HOH . J 5 HOH A 163 1263 152 HOH HOH . J 5 HOH A 164 1264 137 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 5V5 . . . B 2 65.029 23.798 -16.403 1 54.59 ? C1 5V5 1001 A 1 HETATM 2 C C2 5V5 . . . B 2 64.831 25.209 -16.993 1 56.11 ? C2 5V5 1001 A 1 HETATM 3 C C3 5V5 . . . B 2 64.882 26.353 -16.206 1 51.67 ? C3 5V5 1001 A 1 HETATM 4 O O1 5V5 . . . B 2 64.261 29.029 -18.729 1 53.15 ? O1 5V5 1001 A 1 HETATM 5 O O2 5V5 . . . B 2 62.633 23.758 -16.105 1 65.7 ? O2 5V5 1001 A 1 HETATM 6 C C11 5V5 . . . B 2 63.33 27.405 -22.804 1 51.05 ? C11 5V5 1001 A 1 HETATM 7 C C12 5V5 . . . B 2 64.573 25.355 -18.35 1 54.12 ? C12 5V5 1001 A 1 HETATM 8 O O 5V5 . . . B 2 63.544 21.887 -16.75 1 69.96 -1 O 5V5 1001 A 1 HETATM 9 C C 5V5 . . . B 2 63.669 23.098 -16.415 1 64.73 ? C 5V5 1001 A 1 HETATM 10 C C4 5V5 . . . B 2 64.688 27.624 -16.729 1 50.47 ? C4 5V5 1001 A 1 HETATM 11 C C5 5V5 . . . B 2 64.438 27.76 -18.116 1 55.51 ? C5 5V5 1001 A 1 HETATM 12 C C6 5V5 . . . B 2 64.266 30.175 -17.912 1 51.86 ? C6 5V5 1001 A 1 HETATM 13 C C7 5V5 . . . B 2 64.396 26.614 -18.909 1 51.16 ? C7 5V5 1001 A 1 HETATM 14 C C8 5V5 . . . B 2 64.134 26.728 -20.415 1 49.44 ? C8 5V5 1001 A 1 HETATM 15 C C9 5V5 . . . B 2 64.639 25.918 -21.425 1 43.53 ? C9 5V5 1001 A 1 HETATM 16 C C10 5V5 . . . B 2 64.196 26.299 -22.747 1 51.64 ? C10 5V5 1001 A 1 HETATM 17 S S 5V5 . . . B 2 63.136 27.871 -21.158 1 57.38 ? S 5V5 1001 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 17 #