data_6H8D # _model_server_result.job_id VkKJQFzvsqY5vwj3QiL9-w _model_server_result.datetime_utc '2025-07-17 11:54:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6h8d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 6H8D # _exptl.entry_id 6H8D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6H8D _cell.length_a 36.852 _cell.length_b 94.329 _cell.length_c 53.355 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6H8D _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_755 -x+2,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 73.704 0 26.6775 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 65 A CYS 275 1_555 E S2 BME . A BME 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc1 A NE2 HIS 54 A HIS 264 1_555 D NI NI . A NI 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? metalc ? metalc2 D NI NI . A NI 403 1_555 F O HOH . A HOH 520 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? metalc ? metalc3 D NI NI . A NI 403 1_555 F O HOH . A HOH 539 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? metalc ? metalc4 D NI NI . A NI 403 1_555 F O HOH . A HOH 551 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? metalc ? metalc5 D NI NI . A NI 403 1_555 F O HOH . A HOH 563 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 299 n n S O2 SO4 doub 300 n n S O3 SO4 sing 301 n n S O4 SO4 sing 302 n n # _atom_sites.entry_id 6H8D _atom_sites.fract_transf_matrix[1][1] 0.027136 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010601 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018742 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 401 1 SO4 SO4 . C 2 SO4 A 1 402 2 SO4 SO4 . D 3 NI A 1 403 1 NI NI . E 4 BME A 1 404 1 BME BME . F 5 HOH A 1 501 58 HOH HOH . F 5 HOH A 2 502 20 HOH HOH . F 5 HOH A 3 503 66 HOH HOH . F 5 HOH A 4 504 64 HOH HOH . F 5 HOH A 5 505 17 HOH HOH . F 5 HOH A 6 506 63 HOH HOH . F 5 HOH A 7 507 27 HOH HOH . F 5 HOH A 8 508 26 HOH HOH . F 5 HOH A 9 509 32 HOH HOH . F 5 HOH A 10 510 39 HOH HOH . F 5 HOH A 11 511 46 HOH HOH . F 5 HOH A 12 512 61 HOH HOH . F 5 HOH A 13 513 31 HOH HOH . F 5 HOH A 14 514 24 HOH HOH . F 5 HOH A 15 515 40 HOH HOH . F 5 HOH A 16 516 10 HOH HOH . F 5 HOH A 17 517 22 HOH HOH . F 5 HOH A 18 518 16 HOH HOH . F 5 HOH A 19 519 18 HOH HOH . F 5 HOH A 20 520 50 HOH HOH . F 5 HOH A 21 521 28 HOH HOH . F 5 HOH A 22 522 34 HOH HOH . F 5 HOH A 23 523 1 HOH HOH . F 5 HOH A 24 524 62 HOH HOH . F 5 HOH A 25 525 44 HOH HOH . F 5 HOH A 26 526 49 HOH HOH . F 5 HOH A 27 527 3 HOH HOH . F 5 HOH A 28 528 6 HOH HOH . F 5 HOH A 29 529 65 HOH HOH . F 5 HOH A 30 530 14 HOH HOH . F 5 HOH A 31 531 42 HOH HOH . F 5 HOH A 32 532 33 HOH HOH . F 5 HOH A 33 533 5 HOH HOH . F 5 HOH A 34 534 60 HOH HOH . F 5 HOH A 35 535 7 HOH HOH . F 5 HOH A 36 536 38 HOH HOH . F 5 HOH A 37 537 21 HOH HOH . F 5 HOH A 38 538 30 HOH HOH . F 5 HOH A 39 539 36 HOH HOH . F 5 HOH A 40 540 41 HOH HOH . F 5 HOH A 41 541 19 HOH HOH . F 5 HOH A 42 542 52 HOH HOH . F 5 HOH A 43 543 25 HOH HOH . F 5 HOH A 44 544 29 HOH HOH . F 5 HOH A 45 545 2 HOH HOH . F 5 HOH A 46 546 47 HOH HOH . F 5 HOH A 47 547 4 HOH HOH . F 5 HOH A 48 548 51 HOH HOH . F 5 HOH A 49 549 53 HOH HOH . F 5 HOH A 50 550 23 HOH HOH . F 5 HOH A 51 551 35 HOH HOH . F 5 HOH A 52 552 43 HOH HOH . F 5 HOH A 53 553 37 HOH HOH . F 5 HOH A 54 554 9 HOH HOH . F 5 HOH A 55 555 54 HOH HOH . F 5 HOH A 56 556 59 HOH HOH . F 5 HOH A 57 557 11 HOH HOH . F 5 HOH A 58 558 12 HOH HOH . F 5 HOH A 59 559 15 HOH HOH . F 5 HOH A 60 560 13 HOH HOH . F 5 HOH A 61 561 56 HOH HOH . F 5 HOH A 62 562 8 HOH HOH . F 5 HOH A 63 563 48 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . B 2 32.8 21.724 11.684 1 30.33 ? S SO4 401 A 1 HETATM 2 O O1 SO4 . . . B 2 32.872 22.169 10.278 1 29.05 ? O1 SO4 401 A 1 HETATM 3 O O2 SO4 . . . B 2 32.615 20.224 11.763 1 29.45 ? O2 SO4 401 A 1 HETATM 4 O O3 SO4 . . . B 2 31.611 22.227 12.375 1 37.24 ? O3 SO4 401 A 1 HETATM 5 O O4 SO4 . . . B 2 34.075 22.094 12.317 1 30.4 ? O4 SO4 401 A 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 251 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #