data_6H9A # _model_server_result.job_id BbU__b8DH-paj7k9wJ3D3w _model_server_result.datetime_utc '2024-11-22 07:39:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6h9a # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 6H9A # _exptl.entry_id 6H9A _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6H9A _cell.length_a 76.55 _cell.length_b 178.24 _cell.length_c 43.266 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6H9A _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O TRP 200 A TRP 216 1_555 C NA NA . A NA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? metalc ? metalc2 A OD1 ASN 201 A ASN 217 1_555 C NA NA . A NA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? metalc ? metalc3 A O THR 398 A THR 414 1_555 C NA NA . A NA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? metalc ? metalc4 A O ASP 421 A ASP 437 1_555 C NA NA . A NA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? metalc ? metalc5 A OD1 ASP 421 A ASP 437 1_555 C NA NA . A NA 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.436 ? metalc ? metalc6 C NA NA . A NA 502 1_555 H O HOH . A HOH 652 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.7 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6H9A _atom_sites.fract_transf_matrix[1][1] 0.013063 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00561 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023113 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AVJ A 1 501 458 AVJ AVJ . C 3 NA A 1 502 459 NA NA . D 4 CL A 1 503 460 CL CL . E 4 CL A 1 504 461 CL CL . F 4 CL A 1 505 462 CL CL . G 5 SO4 A 1 506 463 SO4 SO4 . H 6 HOH A 1 601 558 HOH HOH . H 6 HOH A 2 602 476 HOH HOH . H 6 HOH A 3 603 515 HOH HOH . H 6 HOH A 4 604 464 HOH HOH . H 6 HOH A 5 605 563 HOH HOH . H 6 HOH A 6 606 502 HOH HOH . H 6 HOH A 7 607 472 HOH HOH . H 6 HOH A 8 608 469 HOH HOH . H 6 HOH A 9 609 562 HOH HOH . H 6 HOH A 10 610 574 HOH HOH . H 6 HOH A 11 611 521 HOH HOH . H 6 HOH A 12 612 540 HOH HOH . H 6 HOH A 13 613 556 HOH HOH . H 6 HOH A 14 614 520 HOH HOH . H 6 HOH A 15 615 567 HOH HOH . H 6 HOH A 16 616 470 HOH HOH . H 6 HOH A 17 617 478 HOH HOH . H 6 HOH A 18 618 483 HOH HOH . H 6 HOH A 19 619 507 HOH HOH . H 6 HOH A 20 620 579 HOH HOH . H 6 HOH A 21 621 583 HOH HOH . H 6 HOH A 22 622 532 HOH HOH . H 6 HOH A 23 623 527 HOH HOH . H 6 HOH A 24 624 560 HOH HOH . H 6 HOH A 25 625 522 HOH HOH . H 6 HOH A 26 626 539 HOH HOH . H 6 HOH A 27 627 491 HOH HOH . H 6 HOH A 28 628 473 HOH HOH . H 6 HOH A 29 629 506 HOH HOH . H 6 HOH A 30 630 493 HOH HOH . H 6 HOH A 31 631 511 HOH HOH . H 6 HOH A 32 632 488 HOH HOH . H 6 HOH A 33 633 561 HOH HOH . H 6 HOH A 34 634 523 HOH HOH . H 6 HOH A 35 635 528 HOH HOH . H 6 HOH A 36 636 512 HOH HOH . H 6 HOH A 37 637 499 HOH HOH . H 6 HOH A 38 638 517 HOH HOH . H 6 HOH A 39 639 471 HOH HOH . H 6 HOH A 40 640 564 HOH HOH . H 6 HOH A 41 641 538 HOH HOH . H 6 HOH A 42 642 492 HOH HOH . H 6 HOH A 43 643 514 HOH HOH . H 6 HOH A 44 644 518 HOH HOH . H 6 HOH A 45 645 475 HOH HOH . H 6 HOH A 46 646 508 HOH HOH . H 6 HOH A 47 647 465 HOH HOH . H 6 HOH A 48 648 546 HOH HOH . H 6 HOH A 49 649 468 HOH HOH . H 6 HOH A 50 650 519 HOH HOH . H 6 HOH A 51 651 557 HOH HOH . H 6 HOH A 52 652 581 HOH HOH . H 6 HOH A 53 653 565 HOH HOH . H 6 HOH A 54 654 504 HOH HOH . H 6 HOH A 55 655 485 HOH HOH . H 6 HOH A 56 656 495 HOH HOH . H 6 HOH A 57 657 513 HOH HOH . H 6 HOH A 58 658 510 HOH HOH . H 6 HOH A 59 659 529 HOH HOH . H 6 HOH A 60 660 535 HOH HOH . H 6 HOH A 61 661 580 HOH HOH . H 6 HOH A 62 662 525 HOH HOH . H 6 HOH A 63 663 576 HOH HOH . H 6 HOH A 64 664 496 HOH HOH . H 6 HOH A 65 665 494 HOH HOH . H 6 HOH A 66 666 572 HOH HOH . H 6 HOH A 67 667 482 HOH HOH . H 6 HOH A 68 668 503 HOH HOH . H 6 HOH A 69 669 543 HOH HOH . H 6 HOH A 70 670 548 HOH HOH . H 6 HOH A 71 671 533 HOH HOH . H 6 HOH A 72 672 536 HOH HOH . H 6 HOH A 73 673 530 HOH HOH . H 6 HOH A 74 674 489 HOH HOH . H 6 HOH A 75 675 474 HOH HOH . H 6 HOH A 76 676 477 HOH HOH . H 6 HOH A 77 677 575 HOH HOH . H 6 HOH A 78 678 500 HOH HOH . H 6 HOH A 79 679 534 HOH HOH . H 6 HOH A 80 680 490 HOH HOH . H 6 HOH A 81 681 524 HOH HOH . H 6 HOH A 82 682 467 HOH HOH . H 6 HOH A 83 683 542 HOH HOH . H 6 HOH A 84 684 487 HOH HOH . H 6 HOH A 85 685 544 HOH HOH . H 6 HOH A 86 686 577 HOH HOH . H 6 HOH A 87 687 516 HOH HOH . H 6 HOH A 88 688 537 HOH HOH . H 6 HOH A 89 689 484 HOH HOH . H 6 HOH A 90 690 526 HOH HOH . H 6 HOH A 91 691 466 HOH HOH . H 6 HOH A 92 692 479 HOH HOH . H 6 HOH A 93 693 578 HOH HOH . H 6 HOH A 94 694 547 HOH HOH . H 6 HOH A 95 695 566 HOH HOH . H 6 HOH A 96 696 549 HOH HOH . H 6 HOH A 97 697 582 HOH HOH . H 6 HOH A 98 698 480 HOH HOH . H 6 HOH A 99 699 486 HOH HOH . H 6 HOH A 100 700 509 HOH HOH . H 6 HOH A 101 701 501 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -32.143 _atom_site.Cartn_y 8.618 _atom_site.Cartn_z -16.126 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 14.99 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 502 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 36 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 590 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #