data_6H9B # _model_server_result.job_id JSBm4iyB3Rf2qOmUKhUmIw _model_server_result.datetime_utc '2024-11-22 08:27:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6h9b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":502}' # _entry.id 6H9B # _exptl.entry_id 6H9B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 11 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation 'C14A, F20W' _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6H9B _cell.length_a 64.94 _cell.length_b 128.48 _cell.length_c 251.04 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6H9B _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N ? 4 J N N ? 4 K N N ? 4 L N N ? 4 O N N ? 4 R N N ? 4 S N N ? 4 T N N ? 4 U N N ? 4 X N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 H O2G GTP . A GTP 503 1_555 I MG MG . A MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.529 ? metalc ? metalc2 H O1B GTP . A GTP 503 1_555 I MG MG . A MG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.582 ? metalc ? metalc3 I MG MG . A MG 504 1_555 Y O HOH . A HOH 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.467 ? metalc ? metalc4 I MG MG . A MG 504 1_555 Y O HOH . A HOH 609 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.992 ? metalc ? metalc5 P O3G GTP . C GTP 502 1_555 Q MG MG . C MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? metalc ? metalc6 P O1B GTP . C GTP 502 1_555 Q MG MG . C MG 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? metalc ? metalc7 Q MG MG . C MG 503 1_555 AA O HOH . C HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.934 ? metalc ? metalc8 Q MG MG . C MG 503 1_555 AA O HOH . C HOH 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.611 ? metalc ? metalc9 Q MG MG . C MG 503 1_555 AA O HOH . C HOH 608 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.947 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 436 n n S O2 SO4 doub 437 n n S O3 SO4 sing 438 n n S O4 SO4 sing 439 n n # _atom_sites.entry_id 6H9B _atom_sites.fract_transf_matrix[1][1] 0.015399 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007783 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003983 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 4 SO4 A 1 501 452 SO4 SO4 . G 4 SO4 A 1 502 453 SO4 SO4 . H 5 GTP A 1 503 501 GTP GTP . I 6 MG A 1 504 502 MG MG . J 4 SO4 B 1 501 456 SO4 SO4 . K 4 SO4 B 1 502 457 SO4 SO4 . L 4 SO4 B 1 503 459 SO4 SO4 . M 7 GDP B 1 504 501 GDP GDP . N 8 FWH B 1 505 701 FWH FTQ . O 4 SO4 C 1 501 456 SO4 SO4 . P 5 GTP C 1 502 501 GTP GTP . Q 6 MG C 1 503 502 MG MG . R 4 SO4 C 1 504 147 SO4 SO4 . S 4 SO4 D 1 501 458 SO4 SO4 . T 4 SO4 D 1 502 457 SO4 SO4 . U 4 SO4 D 1 503 456 SO4 SO4 . V 7 GDP D 1 504 501 GDP GDP . W 8 FWH D 1 505 701 FWH FTQ . X 4 SO4 E 1 201 146 SO4 SO4 . Y 9 HOH A 1 601 192 HOH HOH . Y 9 HOH A 2 602 1 HOH HOH . Y 9 HOH A 3 603 602 HOH HOH . Y 9 HOH A 4 604 218 HOH HOH . Y 9 HOH A 5 605 604 HOH HOH . Y 9 HOH A 6 606 12 HOH HOH . Y 9 HOH A 7 607 15 HOH HOH . Y 9 HOH A 8 608 222 HOH HOH . Y 9 HOH A 9 609 603 HOH HOH . Y 9 HOH A 10 610 215 HOH HOH . Y 9 HOH A 11 611 601 HOH HOH . Y 9 HOH A 12 612 6 HOH HOH . Y 9 HOH A 13 613 65 HOH HOH . Y 9 HOH A 14 614 16 HOH HOH . Y 9 HOH A 15 615 19 HOH HOH . Y 9 HOH A 16 616 3 HOH HOH . Y 9 HOH A 17 617 9 HOH HOH . Y 9 HOH A 18 618 7 HOH HOH . Y 9 HOH A 19 619 10 HOH HOH . Y 9 HOH A 20 620 30 HOH HOH . Y 9 HOH A 21 621 34 HOH HOH . Y 9 HOH A 22 622 29 HOH HOH . Y 9 HOH A 23 623 24 HOH HOH . Y 9 HOH A 24 624 11 HOH HOH . Y 9 HOH A 25 625 156 HOH HOH . Y 9 HOH A 26 626 220 HOH HOH . Y 9 HOH A 27 627 20 HOH HOH . Y 9 HOH A 28 628 21 HOH HOH . Y 9 HOH A 29 629 8 HOH HOH . Y 9 HOH A 30 630 2 HOH HOH . Y 9 HOH A 31 631 31 HOH HOH . Y 9 HOH A 32 632 5 HOH HOH . Y 9 HOH A 33 633 162 HOH HOH . Y 9 HOH A 34 634 4 HOH HOH . Y 9 HOH A 35 635 46 HOH HOH . Y 9 HOH A 36 636 26 HOH HOH . Y 9 HOH A 37 637 22 HOH HOH . Y 9 HOH A 38 638 81 HOH HOH . Y 9 HOH A 39 639 160 HOH HOH . Y 9 HOH A 40 640 201 HOH HOH . Y 9 HOH A 41 641 53 HOH HOH . Y 9 HOH A 42 642 207 HOH HOH . Y 9 HOH A 43 643 32 HOH HOH . Y 9 HOH A 44 644 23 HOH HOH . Y 9 HOH A 45 645 33 HOH HOH . Y 9 HOH A 46 646 18 HOH HOH . Y 9 HOH A 47 647 28 HOH HOH . Y 9 HOH A 48 648 27 HOH HOH . Y 9 HOH A 49 649 210 HOH HOH . Y 9 HOH A 50 650 14 HOH HOH . Y 9 HOH A 51 651 13 HOH HOH . Z 9 HOH B 1 601 39 HOH HOH . Z 9 HOH B 2 602 219 HOH HOH . Z 9 HOH B 3 603 206 HOH HOH . Z 9 HOH B 4 604 40 HOH HOH . Z 9 HOH B 5 605 54 HOH HOH . Z 9 HOH B 6 606 47 HOH HOH . Z 9 HOH B 7 607 155 HOH HOH . Z 9 HOH B 8 608 43 HOH HOH . Z 9 HOH B 9 609 60 HOH HOH . Z 9 HOH B 10 610 61 HOH HOH . Z 9 HOH B 11 611 42 HOH HOH . Z 9 HOH B 12 612 221 HOH HOH . Z 9 HOH B 13 613 200 HOH HOH . Z 9 HOH B 14 614 36 HOH HOH . Z 9 HOH B 15 615 50 HOH HOH . Z 9 HOH B 16 616 161 HOH HOH . Z 9 HOH B 17 617 62 HOH HOH . Z 9 HOH B 18 618 41 HOH HOH . Z 9 HOH B 19 619 51 HOH HOH . Z 9 HOH B 20 620 48 HOH HOH . Z 9 HOH B 21 621 181 HOH HOH . Z 9 HOH B 22 622 63 HOH HOH . Z 9 HOH B 23 623 37 HOH HOH . Z 9 HOH B 24 624 45 HOH HOH . Z 9 HOH B 25 625 175 HOH HOH . Z 9 HOH B 26 626 38 HOH HOH . Z 9 HOH B 27 627 214 HOH HOH . Z 9 HOH B 28 628 52 HOH HOH . Z 9 HOH B 29 629 57 HOH HOH . Z 9 HOH B 30 630 58 HOH HOH . Z 9 HOH B 31 631 56 HOH HOH . Z 9 HOH B 32 632 35 HOH HOH . Z 9 HOH B 33 633 205 HOH HOH . Z 9 HOH B 34 634 111 HOH HOH . Z 9 HOH B 35 635 55 HOH HOH . Z 9 HOH B 36 636 217 HOH HOH . Z 9 HOH B 37 637 184 HOH HOH . Z 9 HOH B 38 638 49 HOH HOH . Z 9 HOH B 39 639 204 HOH HOH . Z 9 HOH B 40 640 189 HOH HOH . Z 9 HOH B 41 641 195 HOH HOH . Z 9 HOH B 42 642 59 HOH HOH . Z 9 HOH B 43 643 44 HOH HOH . AA 9 HOH C 1 601 224 HOH HOH . AA 9 HOH C 2 602 602 HOH HOH . AA 9 HOH C 3 603 603 HOH HOH . AA 9 HOH C 4 604 188 HOH HOH . AA 9 HOH C 5 605 223 HOH HOH . AA 9 HOH C 6 606 121 HOH HOH . AA 9 HOH C 7 607 604 HOH HOH . AA 9 HOH C 8 608 601 HOH HOH . AA 9 HOH C 9 609 129 HOH HOH . AA 9 HOH C 10 610 130 HOH HOH . AA 9 HOH C 11 611 173 HOH HOH . AA 9 HOH C 12 612 112 HOH HOH . AA 9 HOH C 13 613 145 HOH HOH . AA 9 HOH C 14 614 179 HOH HOH . AA 9 HOH C 15 615 110 HOH HOH . AA 9 HOH C 16 616 134 HOH HOH . AA 9 HOH C 17 617 68 HOH HOH . AA 9 HOH C 18 618 126 HOH HOH . AA 9 HOH C 19 619 108 HOH HOH . AA 9 HOH C 20 620 123 HOH HOH . AA 9 HOH C 21 621 132 HOH HOH . AA 9 HOH C 22 622 133 HOH HOH . AA 9 HOH C 23 623 187 HOH HOH . AA 9 HOH C 24 624 137 HOH HOH . AA 9 HOH C 25 625 106 HOH HOH . AA 9 HOH C 26 626 143 HOH HOH . AA 9 HOH C 27 627 98 HOH HOH . AA 9 HOH C 28 628 142 HOH HOH . AA 9 HOH C 29 629 66 HOH HOH . AA 9 HOH C 30 630 152 HOH HOH . AA 9 HOH C 31 631 114 HOH HOH . AA 9 HOH C 32 632 135 HOH HOH . AA 9 HOH C 33 633 125 HOH HOH . AA 9 HOH C 34 634 67 HOH HOH . AA 9 HOH C 35 635 182 HOH HOH . AA 9 HOH C 36 636 140 HOH HOH . AA 9 HOH C 37 637 216 HOH HOH . AA 9 HOH C 38 638 99 HOH HOH . AA 9 HOH C 39 639 105 HOH HOH . AA 9 HOH C 40 640 202 HOH HOH . AA 9 HOH C 41 641 100 HOH HOH . AA 9 HOH C 42 642 186 HOH HOH . AA 9 HOH C 43 643 120 HOH HOH . AA 9 HOH C 44 644 118 HOH HOH . AA 9 HOH C 45 645 171 HOH HOH . AA 9 HOH C 46 646 177 HOH HOH . AA 9 HOH C 47 647 102 HOH HOH . AA 9 HOH C 48 648 72 HOH HOH . AA 9 HOH C 49 649 71 HOH HOH . AA 9 HOH C 50 650 198 HOH HOH . AA 9 HOH C 51 651 199 HOH HOH . AA 9 HOH C 52 652 69 HOH HOH . AA 9 HOH C 53 653 159 HOH HOH . AA 9 HOH C 54 654 109 HOH HOH . AA 9 HOH C 55 655 128 HOH HOH . AA 9 HOH C 56 656 94 HOH HOH . AA 9 HOH C 57 657 147 HOH HOH . BA 9 HOH D 1 601 190 HOH HOH . BA 9 HOH D 2 602 119 HOH HOH . BA 9 HOH D 3 603 153 HOH HOH . BA 9 HOH D 4 604 166 HOH HOH . BA 9 HOH D 5 605 124 HOH HOH . BA 9 HOH D 6 606 167 HOH HOH . BA 9 HOH D 7 607 104 HOH HOH . BA 9 HOH D 8 608 203 HOH HOH . BA 9 HOH D 9 609 117 HOH HOH . BA 9 HOH D 10 610 85 HOH HOH . BA 9 HOH D 11 611 75 HOH HOH . BA 9 HOH D 12 612 168 HOH HOH . BA 9 HOH D 13 613 185 HOH HOH . BA 9 HOH D 14 614 80 HOH HOH . BA 9 HOH D 15 615 97 HOH HOH . BA 9 HOH D 16 616 139 HOH HOH . BA 9 HOH D 17 617 164 HOH HOH . BA 9 HOH D 18 618 191 HOH HOH . BA 9 HOH D 19 619 113 HOH HOH . BA 9 HOH D 20 620 101 HOH HOH . BA 9 HOH D 21 621 149 HOH HOH . BA 9 HOH D 22 622 150 HOH HOH . BA 9 HOH D 23 623 212 HOH HOH . BA 9 HOH D 24 624 73 HOH HOH . BA 9 HOH D 25 625 136 HOH HOH . BA 9 HOH D 26 626 116 HOH HOH . BA 9 HOH D 27 627 144 HOH HOH . BA 9 HOH D 28 628 138 HOH HOH . BA 9 HOH D 29 629 146 HOH HOH . BA 9 HOH D 30 630 74 HOH HOH . BA 9 HOH D 31 631 79 HOH HOH . BA 9 HOH D 32 632 127 HOH HOH . BA 9 HOH D 33 633 170 HOH HOH . BA 9 HOH D 34 634 131 HOH HOH . BA 9 HOH D 35 635 96 HOH HOH . BA 9 HOH D 36 636 180 HOH HOH . BA 9 HOH D 37 637 83 HOH HOH . BA 9 HOH D 38 638 197 HOH HOH . BA 9 HOH D 39 639 154 HOH HOH . BA 9 HOH D 40 640 148 HOH HOH . BA 9 HOH D 41 641 174 HOH HOH . BA 9 HOH D 42 642 169 HOH HOH . BA 9 HOH D 43 643 196 HOH HOH . BA 9 HOH D 44 644 194 HOH HOH . BA 9 HOH D 45 645 107 HOH HOH . BA 9 HOH D 46 646 103 HOH HOH . BA 9 HOH D 47 647 77 HOH HOH . BA 9 HOH D 48 648 141 HOH HOH . BA 9 HOH D 49 649 95 HOH HOH . BA 9 HOH D 50 650 76 HOH HOH . BA 9 HOH D 51 651 151 HOH HOH . BA 9 HOH D 52 652 84 HOH HOH . BA 9 HOH D 53 653 78 HOH HOH . BA 9 HOH D 54 654 172 HOH HOH . BA 9 HOH D 55 655 122 HOH HOH . BA 9 HOH D 56 656 17 HOH HOH . BA 9 HOH D 57 657 213 HOH HOH . BA 9 HOH D 58 658 64 HOH HOH . BA 9 HOH D 59 659 115 HOH HOH . BA 9 HOH D 60 660 193 HOH HOH . BA 9 HOH D 61 661 82 HOH HOH . BA 9 HOH D 62 662 86 HOH HOH . BA 9 HOH D 63 663 178 HOH HOH . BA 9 HOH D 64 664 183 HOH HOH . CA 9 HOH E 1 301 158 HOH HOH . CA 9 HOH E 2 302 209 HOH HOH . CA 9 HOH E 3 303 165 HOH HOH . CA 9 HOH E 4 304 88 HOH HOH . CA 9 HOH E 5 305 176 HOH HOH . CA 9 HOH E 6 306 211 HOH HOH . CA 9 HOH E 7 307 89 HOH HOH . CA 9 HOH E 8 308 157 HOH HOH . CA 9 HOH E 9 309 208 HOH HOH . CA 9 HOH E 10 310 92 HOH HOH . CA 9 HOH E 11 311 91 HOH HOH . CA 9 HOH E 12 312 87 HOH HOH . CA 9 HOH E 13 313 93 HOH HOH . CA 9 HOH E 14 314 90 HOH HOH . CA 9 HOH E 15 315 163 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . K 4 16.065 85.662 108.433 1 183.69 ? S SO4 502 B 1 HETATM 2 O O1 SO4 . . . K 4 16.13 85.263 107.02 1 182.12 ? O1 SO4 502 B 1 HETATM 3 O O2 SO4 . . . K 4 16.749 86.944 108.63 1 188.01 ? O2 SO4 502 B 1 HETATM 4 O O3 SO4 . . . K 4 16.693 84.641 109.284 1 183.75 ? O3 SO4 502 B 1 HETATM 5 O O4 SO4 . . . K 4 14.671 85.834 108.81 1 181.17 ? O4 SO4 502 B 1 # _model_server_stats.io_time_ms 35 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 31 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #