data_6HAL
#
_model_server_result.job_id            IPtIUWmqlmWC0sQOxZJxAA 
_model_server_result.datetime_utc      '2024-11-22 19:26:38' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6hal 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":201}' 
#
_entry.id    6HAL 
#
_exptl.entry_id    6HAL 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6HAL 
_cell.length_a            55.8 
_cell.length_b            157.4 
_cell.length_c            64.2 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6HAL 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 G N N 
? 3 I N N 
? 3 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 86 A HIS 87 1_555 E FE HEM . A HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? 
metalc ? metalc2 B NE2 HIS 91 B HIS 92 1_555 G FE HEM . B HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? 
metalc ? metalc3 C NE2 HIS 86 C HIS 87 1_555 I FE HEM . C HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? 
metalc ? metalc4 D NE2 HIS 91 D HIS 92 1_555 K FE HEM . D HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 130 n n 
CHA C4D HEM doub 131 n n 
CHA HHA HEM sing 132 n n 
CHB C4A HEM sing 133 n n 
CHB C1B HEM doub 134 n n 
CHB HHB HEM sing 135 n n 
CHC C4B HEM sing 136 n n 
CHC C1C HEM doub 137 n n 
CHC HHC HEM sing 138 n n 
CHD C4C HEM doub 139 n n 
CHD C1D HEM sing 140 n n 
CHD HHD HEM sing 141 n n 
C1A C2A HEM doub 142 n y 
C1A NA HEM sing 143 n y 
C2A C3A HEM sing 144 n y 
C2A CAA HEM sing 145 n n 
C3A C4A HEM doub 146 n y 
C3A CMA HEM sing 147 n n 
C4A NA HEM sing 148 n y 
CMA HMA HEM sing 149 n n 
CMA HMAA HEM sing 150 n n 
CMA HMAB HEM sing 151 n n 
CAA CBA HEM sing 152 n n 
CAA HAA HEM sing 153 n n 
CAA HAAA HEM sing 154 n n 
CBA CGA HEM sing 155 n n 
CBA HBA HEM sing 156 n n 
CBA HBAA HEM sing 157 n n 
CGA O1A HEM doub 158 n n 
CGA O2A HEM sing 159 n n 
C1B C2B HEM sing 160 n n 
C1B NB HEM sing 161 n n 
C2B C3B HEM doub 162 n n 
C2B CMB HEM sing 163 n n 
C3B C4B HEM sing 164 n n 
C3B CAB HEM sing 165 n n 
C4B NB HEM doub 166 n n 
CMB HMB HEM sing 167 n n 
CMB HMBA HEM sing 168 n n 
CMB HMBB HEM sing 169 n n 
CAB CBB HEM doub 170 n n 
CAB HAB HEM sing 171 n n 
CBB HBB HEM sing 172 n n 
CBB HBBA HEM sing 173 n n 
C1C C2C HEM sing 174 n y 
C1C NC HEM sing 175 n y 
C2C C3C HEM doub 176 n y 
C2C CMC HEM sing 177 n n 
C3C C4C HEM sing 178 n y 
C3C CAC HEM sing 179 n n 
C4C NC HEM sing 180 n y 
CMC HMC HEM sing 181 n n 
CMC HMCA HEM sing 182 n n 
CMC HMCB HEM sing 183 n n 
CAC CBC HEM doub 184 n n 
CAC HAC HEM sing 185 n n 
CBC HBC HEM sing 186 n n 
CBC HBCA HEM sing 187 n n 
C1D C2D HEM sing 188 n n 
C1D ND HEM doub 189 n n 
C2D C3D HEM doub 190 n n 
C2D CMD HEM sing 191 n n 
C3D C4D HEM sing 192 n n 
C3D CAD HEM sing 193 n n 
C4D ND HEM sing 194 n n 
CMD HMD HEM sing 195 n n 
CMD HMDA HEM sing 196 n n 
CMD HMDB HEM sing 197 n n 
CAD CBD HEM sing 198 n n 
CAD HAD HEM sing 199 n n 
CAD HADA HEM sing 200 n n 
CBD CGD HEM sing 201 n n 
CBD HBD HEM sing 202 n n 
CBD HBDA HEM sing 203 n n 
CGD O1D HEM doub 204 n n 
CGD O2D HEM sing 205 n n 
O2A H2A HEM sing 206 n n 
O2D H2D HEM sing 207 n n 
FE NA HEM sing 208 n n 
FE NB HEM sing 209 n n 
FE NC HEM sing 210 n n 
FE ND HEM sing 211 n n 
#
_atom_sites.entry_id                     6HAL 
_atom_sites.fract_transf_matrix[1][1]    0.017921 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006353 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015576 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 HEM A 1 201 150 HEM HEM . 
F 4 CMO A 1 202 151 CMO CMO . 
G 3 HEM B 1 201 150 HEM HEM . 
H 4 CMO B 1 202 151 CMO CMO . 
I 3 HEM C 1 201 150 HEM HEM . 
J 4 CMO C 1 202 151 CMO CMO . 
K 3 HEM D 1 201 150 HEM HEM . 
L 4 CMO D 1 202 151 CMO CMO . 
M 5 HOH A 1 301 18 HOH HOH . 
M 5 HOH A 2 302 12 HOH HOH . 
M 5 HOH A 3 303 3 HOH HOH . 
M 5 HOH A 4 304 4 HOH HOH . 
M 5 HOH A 5 305 2 HOH HOH . 
M 5 HOH A 6 306 1 HOH HOH . 
M 5 HOH A 7 307 17 HOH HOH . 
M 5 HOH A 8 308 16 HOH HOH . 
N 5 HOH B 1 301 11 HOH HOH . 
N 5 HOH B 2 302 14 HOH HOH . 
N 5 HOH B 3 303 5 HOH HOH . 
O 5 HOH C 1 301 7 HOH HOH . 
O 5 HOH C 2 302 13 HOH HOH . 
O 5 HOH C 3 303 6 HOH HOH . 
O 5 HOH C 4 304 8 HOH HOH . 
O 5 HOH C 5 305 20 HOH HOH . 
O 5 HOH C 6 306 9 HOH HOH . 
P 5 HOH D 1 301 15 HOH HOH . 
P 5 HOH D 2 302 19 HOH HOH . 
P 5 HOH D 3 303 10 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . E 3 -18.777 -31.173 20.001 1 38.22 ? CHA HEM 201 A 1 
HETATM 2 C CHB HEM . . . E 3 -14.603 -33.095 21.512 1 35.22 ? CHB HEM 201 A 1 
HETATM 3 C CHC HEM . . . E 3 -12.342 -29.017 20.333 1 33.77 ? CHC HEM 201 A 1 
HETATM 4 C CHD HEM . . . E 3 -16.525 -27.01 19.126 1 36.73 ? CHD HEM 201 A 1 
HETATM 5 C C1A HEM . . . E 3 -17.836 -32.036 20.532 1 37.13 ? C1A HEM 201 A 1 
HETATM 6 C C2A HEM . . . E 3 -18.114 -33.356 20.957 1 37.99 ? C2A HEM 201 A 1 
HETATM 7 C C3A HEM . . . E 3 -16.962 -33.894 21.403 1 37.21 ? C3A HEM 201 A 1 
HETATM 8 C C4A HEM . . . E 3 -15.946 -32.912 21.202 1 35.68 ? C4A HEM 201 A 1 
HETATM 9 C CMA HEM . . . E 3 -16.801 -35.296 21.952 1 38.82 ? CMA HEM 201 A 1 
HETATM 10 C CAA HEM . . . E 3 -19.478 -34.016 20.984 1 40.66 ? CAA HEM 201 A 1 
HETATM 11 C CBA HEM . . . E 3 -19.756 -34.87 19.742 1 43.03 ? CBA HEM 201 A 1 
HETATM 12 C CGA HEM . . . E 3 -21.117 -35.582 19.8 1 46.36 ? CGA HEM 201 A 1 
HETATM 13 O O1A HEM . . . E 3 -21.821 -35.568 20.792 1 48.29 ? O1A HEM 201 A 1 
HETATM 14 O O2A HEM . . . E 3 -21.566 -36.255 18.713 1 48.56 ? O2A HEM 201 A 1 
HETATM 15 C C1B HEM . . . E 3 -13.622 -32.121 21.294 1 34.12 ? C1B HEM 201 A 1 
HETATM 16 C C2B HEM . . . E 3 -12.24 -32.37 21.561 1 33.57 ? C2B HEM 201 A 1 
HETATM 17 C C3B HEM . . . E 3 -11.586 -31.236 21.227 1 33.44 ? C3B HEM 201 A 1 
HETATM 18 C C4B HEM . . . E 3 -12.635 -30.294 20.753 1 33.35 ? C4B HEM 201 A 1 
HETATM 19 C CMB HEM . . . E 3 -11.655 -33.678 22.078 1 35.34 ? CMB HEM 201 A 1 
HETATM 20 C CAB HEM . . . E 3 -10.129 -30.927 21.272 1 34.04 ? CAB HEM 201 A 1 
HETATM 21 C CBB HEM . . . E 3 -9.394 -31.195 22.34 1 37.52 ? CBB HEM 201 A 1 
HETATM 22 C C1C HEM . . . E 3 -13.286 -28.116 19.903 1 33.63 ? C1C HEM 201 A 1 
HETATM 23 C C2C HEM . . . E 3 -13.003 -26.751 19.626 1 34.27 ? C2C HEM 201 A 1 
HETATM 24 C C3C HEM . . . E 3 -14.19 -26.168 19.265 1 35.09 ? C3C HEM 201 A 1 
HETATM 25 C C4C HEM . . . E 3 -15.189 -27.201 19.369 1 35.15 ? C4C HEM 201 A 1 
HETATM 26 C CMC HEM . . . E 3 -11.636 -26.088 19.68 1 35.19 ? CMC HEM 201 A 1 
HETATM 27 C CAC HEM . . . E 3 -14.415 -24.753 18.863 1 36.4 ? CAC HEM 201 A 1 
HETATM 28 C CBC HEM . . . E 3 -13.947 -23.715 19.57 1 38.35 ? CBC HEM 201 A 1 
HETATM 29 C C1D HEM . . . E 3 -17.485 -28.02 19.248 1 36.85 ? C1D HEM 201 A 1 
HETATM 30 C C2D HEM . . . E 3 -18.917 -27.778 18.944 1 38.37 ? C2D HEM 201 A 1 
HETATM 31 C C3D HEM . . . E 3 -19.523 -28.943 19.107 1 38.88 ? C3D HEM 201 A 1 
HETATM 32 C C4D HEM . . . E 3 -18.485 -29.889 19.57 1 37.53 ? C4D HEM 201 A 1 
HETATM 33 C CMD HEM . . . E 3 -19.544 -26.482 18.496 1 40.69 ? CMD HEM 201 A 1 
HETATM 34 C CAD HEM . . . E 3 -21.002 -29.224 18.938 1 41.25 ? CAD HEM 201 A 1 
HETATM 35 C CBD HEM . . . E 3 -21.708 -28.824 20.23 1 42.8 ? CBD HEM 201 A 1 
HETATM 36 C CGD HEM . . . E 3 -23.199 -29.008 20.068 1 46.05 ? CGD HEM 201 A 1 
HETATM 37 O O1D HEM . . . E 3 -23.83 -29.683 20.837 1 47.18 ? O1D HEM 201 A 1 
HETATM 38 O O2D HEM . . . E 3 -23.86 -28.431 19.062 1 48.01 ? O2D HEM 201 A 1 
HETATM 39 N NA HEM . . . E 3 -16.478 -31.741 20.656 1 35.94 ? NA HEM 201 A 1 
HETATM 40 N NB HEM . . . E 3 -13.845 -30.881 20.77 1 33.73 ? NB HEM 201 A 1 
HETATM 41 N NC HEM . . . E 3 -14.626 -28.388 19.771 1 34.42 ? NC HEM 201 A 1 
HETATM 42 N ND HEM . . . E 3 -17.271 -29.294 19.624 1 36.25 ? ND HEM 201 A 1 
HETATM 43 FE FE HEM . . . E 3 -15.543 -30.093 20.122 1 35.03 ? FE HEM 201 A 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           296 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           43 
#